RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 DSEQ9UL01 958 aa9.42□□□□□ -0.9
NECAP1-207ENST00000544891 FHOD1Q9Y613 1164 aa9.42□□□□□ -0.9
NECAP1-207ENST00000544891 ZBBXA8MT70 800 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 APRTP07741 180 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 FAM200BP0CF97 657 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 TGFB3P10600 412 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 VDRP11473 427 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 ATICP31939 592 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 NLRP11P59045 1033 aaKnown RBP9.41□□□□□ -0.9
NECAP1-207ENST00000544891 TTLL9Q3SXZ7 439 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 KBTBD12Q3ZCT8 623 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 NIPA1Q7RTP0 329 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 ERO1BQ86YB8 467 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 USP38Q8NB14 1042 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 LINC00116Q8NCU8 138 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 TNIP2Q8NFZ5 429 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 FAM161BQ96MY7 647 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 SERPINB12Q96P63 405 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 COLEC11Q9BWP8 271 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 GOLPH3Q9H4A6 298 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 TBX20Q9UMR3 447 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 ESYT3A0FGR9 886 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 H2AFYO75367 372 aaKnown RBP9.41□□□□□ -0.9
NECAP1-207ENST00000544891 FBXO21O94952 628 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 C6orf222P0C671 652 aaPredicted RBP9.41□□□□□ -0.9
NECAP1-207ENST00000544891 ACOT2P49753 483 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 GTF2A2P52657 109 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 PDAP1Q13442 181 aaKnown RBP9.41□□□□□ -0.9
NECAP1-207ENST00000544891 ITPK1Q13572 414 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 UGT3A1Q6NUS8 523 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 BTNL9Q6UXG8 535 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 ATP6V0D2Q8N8Y2 350 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 PTPRN2Q92932 1015 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 TSC22D3Q99576 134 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 TMEM106CQ9BVX2 250 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 GID8Q9NWU2 228 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 RRN3Q9NYV6 651 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 H7C4K7 107 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 EGFRP00533 1210 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 ATP6V1E1P36543 226 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 CAP2P40123 477 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 AARS2Q5JTZ9 985 aaKnown RBP9.41□□□□□ -0.9
NECAP1-207ENST00000544891 VPS37AQ8NEZ2 397 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 DPF2Q92785 391 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 GLT1D1Q96MS3 346 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 MRPL1Q9BYD6 325 aaKnown RBP9.41□□□□□ -0.9
NECAP1-207ENST00000544891 PRDM16Q9HAZ2 1276 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 KBTBD4Q9NVX7 518 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 MAD2L2Q9UI95 211 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 DCTN4Q9UJW0 460 aa9.41□□□□□ -0.9
NECAP1-207ENST00000544891 ELAVL2Q12926 359 aaKnown RBP9.4□□□□□ -0.9
NECAP1-207ENST00000544891 ACCSLQ4AC99 568 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 ANGEL2Q5VTE6 544 aaKnown RBP9.4□□□□□ -0.9
NECAP1-207ENST00000544891 LCA5Q86VQ0 697 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 COL23A1Q86Y22 540 aaPredicted RBP9.4□□□□□ -0.9
NECAP1-207ENST00000544891 HPDLQ96IR7 371 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 SLC13A1Q9BZW2 595 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 GGA3Q9NZ52 723 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 SBF2Q86WG5 1849 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 NID2Q14112 1375 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 DFFAO00273 331 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 TLR2O60603 784 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 ODC1P11926 461 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 COMTP21964 271 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 MAGEA4P43358 317 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 SERPINB10P48595 397 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 GEMP55040 296 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 SESN2P58004 480 aaPredicted RBP9.4□□□□□ -0.9
NECAP1-207ENST00000544891 KRT72Q14CN4 511 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 Q4G0T1 1027 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 EFCAB12Q6NXP0 572 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 RNF180Q86T96 592 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 NOP9Q86U38 636 aaKnown RBP9.4□□□□□ -0.9
NECAP1-207ENST00000544891 C4orf19Q8IY42 314 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 RNF217Q8TC41 542 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 RUBCNLQ9H714 662 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 SARS2Q9NP81 518 aaKnown RBP9.4□□□□□ -0.9
NECAP1-207ENST00000544891 WARS2Q9UGM6 360 aaKnown RBP9.4□□□□□ -0.9
NECAP1-207ENST00000544891 MOSPD1Q9UJG1 213 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 TMX2Q9Y320 296 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 LAMB1P07942 1786 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 PPP1R3GB7ZBB8 358 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 GPR182O15218 404 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 ATP9BO43861 1147 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 FAM107AO95990 144 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 GYPCP04921 128 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 HSPA1AP0DMV8 641 aaKnown RBP9.4□□□□□ -0.9
NECAP1-207ENST00000544891 HSPA1BP0DMV9 641 aaKnown RBP9.4□□□□□ -0.9
NECAP1-207ENST00000544891 MYBP10242 640 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 CNTFP26441 200 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 CHRNA5P30532 468 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 PGM1P36871 562 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 PEX19P40855 299 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 HADHAP40939 763 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 RGS2P41220 211 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 ZNF135P52742 658 aaPredicted RBP9.4□□□□□ -0.9
NECAP1-207ENST00000544891 OAZ1P54368 228 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 RPS6P62753 249 aaKnown RBP9.4□□□□□ -0.9
NECAP1-207ENST00000544891 CUL2Q13617 745 aa9.4□□□□□ -0.9
NECAP1-207ENST00000544891 THEMIS2Q5TEJ8 643 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms