RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 KIF9Q9HAQ2 790 aa15.84■□□□□ 0.13
COPS7A-220ENST00000544725 TMEM9BQ9NQ34 198 aa15.84■□□□□ 0.13
COPS7A-220ENST00000544725 POLR3BQ9NW08 1133 aaPredicted RBP15.84■□□□□ 0.13
COPS7A-220ENST00000544725 NBEAQ8NFP9 2946 aa15.83■□□□□ 0.12
COPS7A-220ENST00000544725 E9PMD0 336 aa15.83■□□□□ 0.12
COPS7A-220ENST00000544725 KHNYNO15037 678 aaKnown RBP15.83■□□□□ 0.12
COPS7A-220ENST00000544725 DCLK1O15075 740 aa15.83■□□□□ 0.12
COPS7A-220ENST00000544725 ATF6P18850 670 aa15.83■□□□□ 0.12
COPS7A-220ENST00000544725 DDX6P26196 483 aaKnown RBP eCLIP15.83■□□□□ 0.12
COPS7A-220ENST00000544725 GBP1P32455 592 aa15.83■□□□□ 0.12
COPS7A-220ENST00000544725 GALK1P51570 392 aa15.83■□□□□ 0.12
COPS7A-220ENST00000544725 SMTNP53814 917 aa15.83■□□□□ 0.12
COPS7A-220ENST00000544725 MAPK7Q13164 816 aa15.83■□□□□ 0.12
COPS7A-220ENST00000544725 PDIA5Q14554 519 aa15.83■□□□□ 0.12
COPS7A-220ENST00000544725 DMC1Q14565 340 aa15.83■□□□□ 0.12
COPS7A-220ENST00000544725 ME3Q16798 604 aa15.83■□□□□ 0.12
COPS7A-220ENST00000544725 SLC39A12Q504Y0 691 aa15.83■□□□□ 0.12
COPS7A-220ENST00000544725 TTC38Q5R3I4 469 aa15.83■□□□□ 0.12
COPS7A-220ENST00000544725 RINT1Q6NUQ1 792 aa15.83■□□□□ 0.12
COPS7A-220ENST00000544725 CC2D1AQ6P1N0 951 aaPredicted RBP15.83■□□□□ 0.12
COPS7A-220ENST00000544725 RPLP0P6Q8NHW5 317 aa15.83■□□□□ 0.12
COPS7A-220ENST00000544725 SPIRE2Q8WWL2 714 aa15.83■□□□□ 0.12
COPS7A-220ENST00000544725 GATA6Q92908 595 aa15.83■□□□□ 0.12
COPS7A-220ENST00000544725 CHFRQ96EP1 664 aa15.83■□□□□ 0.12
COPS7A-220ENST00000544725 SENP8Q96LD8 212 aa15.83■□□□□ 0.12
COPS7A-220ENST00000544725 TSPAN18Q96SJ8 248 aa15.83■□□□□ 0.12
COPS7A-220ENST00000544725 RUSC1Q9BVN2 902 aa15.83■□□□□ 0.12
COPS7A-220ENST00000544725 SCNM1Q9BWG6 230 aa15.83■□□□□ 0.12
COPS7A-220ENST00000544725 OTOL1A6NHN0 477 aaPredicted RBP15.82■□□□□ 0.12
COPS7A-220ENST00000544725 SRRM3A6NNA2 597 aaPredicted RBP15.82■□□□□ 0.12
COPS7A-220ENST00000544725 SFI1A8K8P3 1242 aa15.82■□□□□ 0.12
COPS7A-220ENST00000544725 MAPTP10636 758 aaKnown RBP15.82■□□□□ 0.12
COPS7A-220ENST00000544725 DGKEP52429 567 aa15.82■□□□□ 0.12
COPS7A-220ENST00000544725 LILRA4P59901 499 aa15.82■□□□□ 0.12
COPS7A-220ENST00000544725 GUCY1B3Q02153 619 aa15.82■□□□□ 0.12
COPS7A-220ENST00000544725 SMARCB1Q12824 385 aa15.82■□□□□ 0.12
COPS7A-220ENST00000544725 PDGFRLQ15198 375 aa15.82■□□□□ 0.12
COPS7A-220ENST00000544725 KYAT1Q16773 422 aa15.82■□□□□ 0.12
COPS7A-220ENST00000544725 USP39Q53GS9 565 aaKnown RBP15.82■□□□□ 0.12
COPS7A-220ENST00000544725 C1orf186Q6ZWK4 172 aa15.82■□□□□ 0.12
COPS7A-220ENST00000544725 TMEM161BQ8NDZ6 487 aa15.82■□□□□ 0.12
COPS7A-220ENST00000544725 GIPC2Q8TF65 315 aa15.82■□□□□ 0.12
COPS7A-220ENST00000544725 C2orf15Q8WU43 125 aaKnown RBP15.82■□□□□ 0.12
COPS7A-220ENST00000544725 USP13Q92995 863 aaPredicted RBP15.82■□□□□ 0.12
COPS7A-220ENST00000544725 FBRSL1Q9HCM7 1045 aaKnown RBP15.82■□□□□ 0.12
COPS7A-220ENST00000544725 TDP1Q9NUW8 608 aa15.82■□□□□ 0.12
COPS7A-220ENST00000544725 CCL26Q9Y258 94 aa15.82■□□□□ 0.12
COPS7A-220ENST00000544725 SOBPA7XYQ1 873 aa15.81■□□□□ 0.12
COPS7A-220ENST00000544725 LACTBL1A8MY62 500 aa15.81■□□□□ 0.12
COPS7A-220ENST00000544725 TOP3BO95985 862 aaKnown RBP15.81■□□□□ 0.12
COPS7A-220ENST00000544725 CYP11A1P05108 521 aa15.81■□□□□ 0.12
COPS7A-220ENST00000544725 PLS3P13797 630 aa15.81■□□□□ 0.12
COPS7A-220ENST00000544725 ARSAP15289 507 aa15.81■□□□□ 0.12
COPS7A-220ENST00000544725 GUCY2CP25092 1073 aa15.81■□□□□ 0.12
COPS7A-220ENST00000544725 GUCY2FP51841 1108 aa15.81■□□□□ 0.12
COPS7A-220ENST00000544725 KRT79Q5XKE5 535 aa15.81■□□□□ 0.12
COPS7A-220ENST00000544725 PMS2CLQ68D20 193 aa15.81■□□□□ 0.12
COPS7A-220ENST00000544725 CYP2U1Q7Z449 544 aa15.81■□□□□ 0.12
COPS7A-220ENST00000544725 WDFY3Q8IZQ1 3526 aa15.81■□□□□ 0.12
COPS7A-220ENST00000544725 CPA6Q8N4T0 437 aa15.81■□□□□ 0.12
COPS7A-220ENST00000544725 MAB21L3Q8N8X9 362 aa15.81■□□□□ 0.12
COPS7A-220ENST00000544725 IGSF22Q8N9C0 903 aa15.81■□□□□ 0.12
COPS7A-220ENST00000544725 OR10T2Q8NGX3 314 aa15.81■□□□□ 0.12
COPS7A-220ENST00000544725 CCDC26Q8TAB7 109 aa15.81■□□□□ 0.12
COPS7A-220ENST00000544725 ZCCHC14Q8WYQ9 949 aaKnown RBP15.81■□□□□ 0.12
COPS7A-220ENST00000544725 BICD1Q96G01 975 aa15.81■□□□□ 0.12
COPS7A-220ENST00000544725 ZCWPW1Q9H0M4 648 aa15.81■□□□□ 0.12
COPS7A-220ENST00000544725 FOXP1Q9H334 677 aaPredicted RBP15.81■□□□□ 0.12
COPS7A-220ENST00000544725 DSEQ9UL01 958 aa15.81■□□□□ 0.12
COPS7A-220ENST00000544725 KIF26AQ9ULI4 1882 aaPredicted RBP15.81■□□□□ 0.12
COPS7A-220ENST00000544725 TBX20Q9UMR3 447 aa15.81■□□□□ 0.12
COPS7A-220ENST00000544725 EML5Q05BV3 1969 aa15.8■□□□□ 0.12
COPS7A-220ENST00000544725 PPEF2O14830 753 aa15.8■□□□□ 0.12
COPS7A-220ENST00000544725 GJA4P35212 333 aa15.8■□□□□ 0.12
COPS7A-220ENST00000544725 TNFSF9P41273 254 aa15.8■□□□□ 0.12
COPS7A-220ENST00000544725 TRAPPC10P48553 1259 aa15.8■□□□□ 0.12
COPS7A-220ENST00000544725 ANAPC15P60006 121 aa15.8■□□□□ 0.12
COPS7A-220ENST00000544725 ZNF268Q14587 947 aaPredicted RBP15.8■□□□□ 0.12
COPS7A-220ENST00000544725 SPATA1Q5VX52 437 aa15.8■□□□□ 0.12
COPS7A-220ENST00000544725 LRSAM1Q6UWE0 723 aa15.8■□□□□ 0.12
COPS7A-220ENST00000544725 METTL23Q86XA0 190 aa15.8■□□□□ 0.12
COPS7A-220ENST00000544725 THEM5Q8N1Q8 247 aa15.8■□□□□ 0.12
COPS7A-220ENST00000544725 C4orf32Q8N8J7 132 aa15.8■□□□□ 0.12
COPS7A-220ENST00000544725 TSTD1Q8NFU3 115 aa15.8■□□□□ 0.12
COPS7A-220ENST00000544725 SPPL2BQ8TCT7 592 aa15.8■□□□□ 0.12
COPS7A-220ENST00000544725 MRPS31Q92665 395 aaKnown RBP15.8■□□□□ 0.12
COPS7A-220ENST00000544725 CD101Q93033 1021 aa15.8■□□□□ 0.12
COPS7A-220ENST00000544725 HAPLN2Q9GZV7 340 aa15.8■□□□□ 0.12
COPS7A-220ENST00000544725 RPF1Q9H9Y2 349 aaKnown RBP15.8■□□□□ 0.12
COPS7A-220ENST00000544725 NOL7Q9UMY1 257 aaKnown RBP15.8■□□□□ 0.12
COPS7A-220ENST00000544725 LHX6Q9UPM6 363 aa15.8■□□□□ 0.12
COPS7A-220ENST00000544725 ATG2BQ96BY7 2078 aa15.8■□□□□ 0.12
COPS7A-220ENST00000544725 ITPR1Q14643 2758 aa15.8■□□□□ 0.12
COPS7A-220ENST00000544725 H0YCG3 227 aa15.79■□□□□ 0.12
COPS7A-220ENST00000544725 CDX4O14627 284 aaPredicted RBP15.79■□□□□ 0.12
COPS7A-220ENST00000544725 F11P03951 625 aa15.79■□□□□ 0.12
COPS7A-220ENST00000544725 HAPLN1P10915 354 aaPredicted RBP15.79■□□□□ 0.12
COPS7A-220ENST00000544725 U2AF2P26368 475 aaKnown RBP eCLIP15.79■□□□□ 0.12
COPS7A-220ENST00000544725 NLRP12P59046 1061 aa15.79■□□□□ 0.12
COPS7A-220ENST00000544725 PSMD2Q13200 908 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms