RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 ITGALP20701 1170 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 PEX2P28328 305 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 SLC7A1P30825 629 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 ZEB1P37275 1124 aaPredicted RBP2.92□□□□□ -1.94
YBX3-214ENST00000544501 AVPR1BP47901 424 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 SLC11A2P49281 568 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 TOB1P50616 345 aaPredicted RBP2.92□□□□□ -1.94
YBX3-214ENST00000544501 WNT3P56703 355 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 TBX4P57082 545 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 SCAPQ12770 1279 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 TP53BP2Q13625 1128 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 RAB32Q13637 225 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 IQCB1Q15051 598 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 CNGA2Q16280 664 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 GEN1Q17RS7 908 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 LONRF3Q496Y0 759 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 SLC44A4Q53GD3 710 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 LMBRD2Q68DH5 695 aaPredicted RBP2.92□□□□□ -1.94
YBX3-214ENST00000544501 IGFL4Q6B9Z1 124 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 SFRP4Q6FHJ7 346 aaPredicted RBP2.92□□□□□ -1.94
YBX3-214ENST00000544501 TAF2Q6P1X5 1199 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 GPR149Q86SP6 731 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 ADGRG5Q8IZF4 528 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 LCORLQ8N3X6 602 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 CELF5Q8N6W0 485 aaKnown RBP2.92□□□□□ -1.94
YBX3-214ENST00000544501 PSD4Q8NDX1 1056 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 NSUN7Q8NE18 718 aaKnown RBP2.92□□□□□ -1.94
YBX3-214ENST00000544501 FBXO41Q8TF61 875 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 SNX19Q92543 992 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 LARP4BQ92615 738 aaKnown RBP2.92□□□□□ -1.94
YBX3-214ENST00000544501 NMD3Q96D46 503 aaKnown RBP2.92□□□□□ -1.94
YBX3-214ENST00000544501 PTCD3Q96EY7 689 aaKnown RBP2.92□□□□□ -1.94
YBX3-214ENST00000544501 P2RX7Q99572 595 aaKnown RBP2.92□□□□□ -1.94
YBX3-214ENST00000544501 WDR11Q9BZH6 1224 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 ZNF518BQ9C0D4 1074 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 BTBD1Q9H0C5 482 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 KIAA1586Q9HCI6 787 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 ANKFY1Q9P2R3 1169 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 HESX1Q9UBX0 185 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 DMTF1Q9Y222 760 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 TMX2Q9Y320 296 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 A0A087WWL8 130 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 A0A0B4J269 797 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 ANO9A1A5B4 782 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 TRIM43BA6NCK2 446 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 PROM1O43490 865 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 ITGAMP11215 1152 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 BRAFP15056 766 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 GATA3P23771 443 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 NPTX2P47972 431 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 GCLCP48506 637 aaPredicted RBP2.91□□□□□ -1.94
YBX3-214ENST00000544501 NDUFV1P49821 464 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 SUMO3P55854 103 aaPredicted RBP2.91□□□□□ -1.94
YBX3-214ENST00000544501 LOXL3P58215 753 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 MC2RQ01718 297 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 FMO1Q01740 532 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 SATB1Q01826 763 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 SLC13A2Q13183 592 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 CTBP1Q13363 440 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 TUBB3Q13509 450 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 SAFBQ15424 915 aaKnown RBP eCLIP2.91□□□□□ -1.94
YBX3-214ENST00000544501 CD300EQ496F6 205 aaPredicted RBP2.91□□□□□ -1.94
YBX3-214ENST00000544501 PREPLQ4J6C6 727 aaPredicted RBP2.91□□□□□ -1.94
YBX3-214ENST00000544501 LCE5AQ5TCM9 118 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 SLC30A10Q6XR72 485 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 GAS2L3Q86XJ1 694 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 COL23A1Q86Y22 540 aaPredicted RBP2.91□□□□□ -1.94
YBX3-214ENST00000544501 FAM9AQ8IZU1 332 aaPredicted RBP2.91□□□□□ -1.94
YBX3-214ENST00000544501 PCSK9Q8NBP7 692 aaKnown RBP2.91□□□□□ -1.94
YBX3-214ENST00000544501 FAM46DQ8NEK8 389 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 PJA1Q8NG27 643 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 ASB10Q8WXI3 467 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 LINC00476Q8WZB0 136 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 SLC9A6Q92581 669 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 TMEM125Q96AQ2 219 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 TRIM43Q96BQ3 446 aaPredicted RBP2.91□□□□□ -1.94
YBX3-214ENST00000544501 MSLNLQ96KJ4 702 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 STRBPQ96SI9 672 aaKnown RBP2.91□□□□□ -1.94
YBX3-214ENST00000544501 KRTAP4-7Q9BYR0 210 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 SMURF2Q9HAU4 748 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 CYP4F11Q9HBI6 524 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 ZNF287Q9HBT7 754 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 A1CFQ9NQ94 594 aaKnown RBP2.91□□□□□ -1.94
YBX3-214ENST00000544501 SYBUQ9NX95 663 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 XPR1Q9UBH6 696 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 TESQ9UGI8 421 aaKnown RBP2.91□□□□□ -1.94
YBX3-214ENST00000544501 SRRDQ9UH36 339 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 AFF4Q9UHB7 1163 aaKnown RBP2.91□□□□□ -1.94
YBX3-214ENST00000544501 OGDHLQ9ULD0 1010 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 SHOC2Q9UQ13 582 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 HS3ST3A1Q9Y663 406 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 MAST3O60307 1309 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 USP19O94966 1318 aa2.91□□□□□ -1.94
YBX3-214ENST00000544501 GRID2IPA4D2P6 1211 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 F5H697 171 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 VPS4BO75351 444 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 RHOBTB3O94955 611 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 MYL1P05976 194 aa2.9□□□□□ -1.95
YBX3-214ENST00000544501 PPIFP30405 207 aaKnown RBP2.9□□□□□ -1.95
YBX3-214ENST00000544501 LRPAP1P30533 357 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms