RNA–Protein interactions for RNA: ENST00000544360.5

HMBS-220, Transcript of hydroxymethylbilane synthase, humanhuman

TSL 3

Gene HMBS, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBS-220ENST00000544360 SPATA18Q8TC71 538 aa13.16□□□□□ -0.3
HMBS-220ENST00000544360 WHAMMQ8TF30 809 aa13.16□□□□□ -0.3
HMBS-220ENST00000544360 KBTBD7Q8WVZ9 684 aa13.16□□□□□ -0.3
HMBS-220ENST00000544360 ZNF606Q8WXB4 792 aa13.16□□□□□ -0.3
HMBS-220ENST00000544360 SYT15Q9BQS2 421 aa13.16□□□□□ -0.3
HMBS-220ENST00000544360 DESI2Q9BSY9 194 aa13.16□□□□□ -0.3
HMBS-220ENST00000544360 MED10Q9BTT4 135 aa13.16□□□□□ -0.3
HMBS-220ENST00000544360 ZKSCAN5Q9Y2L8 839 aa13.16□□□□□ -0.3
HMBS-220ENST00000544360 TRIP11Q15643 1979 aa13.16□□□□□ -0.3
HMBS-220ENST00000544360 ALPK3Q96L96 1907 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 MICAL3Q7RTP6 2002 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 EIF3CLB5ME19 914 aaKnown RBP13.15□□□□□ -0.3
HMBS-220ENST00000544360 H7C4K7 107 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 SYN3O14994 580 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 CCP110O43303 1012 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 ZSCAN12O43309 604 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 HCRTO43612 131 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 CYP11A1P05108 521 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 CCDC175P0C221 793 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 PTPN1P18031 435 aaKnown RBP13.15□□□□□ -0.3
HMBS-220ENST00000544360 LMO2P25791 158 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 TKTP29401 623 aaKnown RBP13.15□□□□□ -0.3
HMBS-220ENST00000544360 PPM1AP35813 382 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 MAGEA1P43355 309 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 PSMC1P62191 440 aaKnown RBP13.15□□□□□ -0.3
HMBS-220ENST00000544360 HTRA4P83105 476 aaPredicted RBP13.15□□□□□ -0.3
HMBS-220ENST00000544360 CYP27A1Q02318 531 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 KRT17Q04695 432 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 SHHQ15465 462 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 STILQ15468 1287 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 SLC18A3Q16572 532 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 C9orf50Q5SZB4 431 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 ALKBH5Q6P6C2 394 aaKnown RBP13.15□□□□□ -0.3
HMBS-220ENST00000544360 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.15□□□□□ -0.3
HMBS-220ENST00000544360 TRIM72Q6ZMU5 477 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 TOGARAM2Q6ZUX3 1019 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 PASD1Q8IV76 773 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 ACRBPQ8NEB7 543 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 IGSF21Q96ID5 467 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 EIF3CQ99613 913 aaKnown RBP13.15□□□□□ -0.3
HMBS-220ENST00000544360 DPEP3Q9H4B8 488 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 FAM49BQ9NUQ9 324 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 MARCH5Q9NX47 278 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 HESX1Q9UBX0 185 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 NOCTQ9UK39 431 aaKnown RBP13.15□□□□□ -0.3
HMBS-220ENST00000544360 CDH9Q9ULB4 789 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 STXBP5LQ9Y2K9 1186 aa13.15□□□□□ -0.3
HMBS-220ENST00000544360 A0A087X0T9 212 aa13.14□□□□□ -0.31
HMBS-220ENST00000544360 FAM170AA1A519 330 aa13.14□□□□□ -0.31
HMBS-220ENST00000544360 H0YGN5 161 aa13.14□□□□□ -0.31
HMBS-220ENST00000544360 M0QYV0 167 aa13.14□□□□□ -0.31
HMBS-220ENST00000544360 DDX3XO00571 662 aaKnown RBP eCLIP13.14□□□□□ -0.319e-26■□□□□ 9.8
HMBS-220ENST00000544360 GABRDO14764 452 aa13.14□□□□□ -0.31
HMBS-220ENST00000544360 FAM228BP0C875 321 aa13.14□□□□□ -0.31
HMBS-220ENST00000544360 CHRNB2P17787 502 aa13.14□□□□□ -0.31
HMBS-220ENST00000544360 ADORA2BP29275 332 aa13.14□□□□□ -0.31
HMBS-220ENST00000544360 CA8P35219 290 aa13.14□□□□□ -0.31
HMBS-220ENST00000544360 RABGGTBP53611 331 aa13.14□□□□□ -0.31
HMBS-220ENST00000544360 FMO1Q01740 532 aa13.14□□□□□ -0.31
HMBS-220ENST00000544360 CTXN3Q4LDR2 81 aa13.14□□□□□ -0.31
HMBS-220ENST00000544360 MDH1BQ5I0G3 518 aa13.14□□□□□ -0.31
HMBS-220ENST00000544360 ZNF280DQ6N043 979 aa13.14□□□□□ -0.31
HMBS-220ENST00000544360 LIMS2Q7Z4I7 341 aa13.14□□□□□ -0.31
HMBS-220ENST00000544360 ZSCAN30Q86W11 494 aa13.14□□□□□ -0.31
HMBS-220ENST00000544360 SLC39A11Q8N1S5 342 aa13.14□□□□□ -0.31
HMBS-220ENST00000544360 B3GALNT2Q8NCR0 500 aa13.14□□□□□ -0.31
HMBS-220ENST00000544360 TMEM35BQ8NCS4 154 aa13.14□□□□□ -0.31
HMBS-220ENST00000544360 LNX1Q8TBB1 728 aaPredicted RBP13.14□□□□□ -0.31
HMBS-220ENST00000544360 TFAP2BQ92481 460 aa13.14□□□□□ -0.31
HMBS-220ENST00000544360 TTPALQ9BTX7 342 aa13.14□□□□□ -0.31
HMBS-220ENST00000544360 GPR62Q9BZJ7 368 aa13.14□□□□□ -0.31
HMBS-220ENST00000544360 RC3H2Q9HBD1 1191 aaKnown RBP13.14□□□□□ -0.31
HMBS-220ENST00000544360 TRMT1Q9NXH9 659 aaKnown RBP13.14□□□□□ -0.31
HMBS-220ENST00000544360 PCDHA13Q9Y5I0 950 aa13.14□□□□□ -0.31
HMBS-220ENST00000544360 ATP8B3O60423 1300 aa13.13□□□□□ -0.31
HMBS-220ENST00000544360 ATP2C2O75185 946 aa13.13□□□□□ -0.31
HMBS-220ENST00000544360 MICAL2O94851 1124 aa13.13□□□□□ -0.31
HMBS-220ENST00000544360 H2AFZP0C0S5 128 aa13.13□□□□□ -0.31
HMBS-220ENST00000544360 CTNNB1P35222 781 aa13.13□□□□□ -0.31
HMBS-220ENST00000544360 NSFP46459 744 aaKnown RBP13.13□□□□□ -0.31
HMBS-220ENST00000544360 ARPP19P56211 112 aa13.13□□□□□ -0.31
HMBS-220ENST00000544360 SLC8A3P57103 927 aa13.13□□□□□ -0.31
HMBS-220ENST00000544360 CNGA2Q16280 664 aa13.13□□□□□ -0.31
HMBS-220ENST00000544360 GOLGA7BQ2TAP0 167 aa13.13□□□□□ -0.31
HMBS-220ENST00000544360 ASTE1Q2TB18 679 aaPredicted RBP13.13□□□□□ -0.31
HMBS-220ENST00000544360 USP41Q3LFD5 358 aa13.13□□□□□ -0.31
HMBS-220ENST00000544360 VARS2Q5ST30 1063 aaKnown RBP13.13□□□□□ -0.31
HMBS-220ENST00000544360 C10orf76Q5T2E6 689 aa13.13□□□□□ -0.31
HMBS-220ENST00000544360 NAA35Q5VZE5 725 aa13.13□□□□□ -0.31
HMBS-220ENST00000544360 H2AFVQ71UI9 128 aa13.13□□□□□ -0.31
HMBS-220ENST00000544360 TMEM173Q86WV6 379 aaPredicted RBP13.13□□□□□ -0.31
HMBS-220ENST00000544360 DCP1BQ8IZD4 617 aaKnown RBP13.13□□□□□ -0.31
HMBS-220ENST00000544360 CRYBG2Q8N1P7 616 aa13.13□□□□□ -0.31
HMBS-220ENST00000544360 C12orf29Q8N999 325 aa13.13□□□□□ -0.31
HMBS-220ENST00000544360 MSANTD4Q8NCY6 345 aa13.13□□□□□ -0.31
HMBS-220ENST00000544360 BCL7CQ8WUZ0 217 aaPredicted RBP13.13□□□□□ -0.31
HMBS-220ENST00000544360 RIN2Q8WYP3 895 aaPredicted RBP13.13□□□□□ -0.31
HMBS-220ENST00000544360 CYFIP2Q96F07 1278 aa13.13□□□□□ -0.31
HMBS-220ENST00000544360 B3GALT6Q96L58 329 aa13.13□□□□□ -0.31
HMBS-220ENST00000544360 NOX5Q96PH1 765 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms