RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.01□□□□□ -0.01
LDB3-207ENST00000542786 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.01□□□□□ -0.01
LDB3-207ENST00000542786 Q9Y3F1 56 aa15.01□□□□□ -0.01
LDB3-207ENST00000542786 GOLGA6CA6NDK9 693 aa15□□□□□ -0.01
LDB3-207ENST00000542786 MED7O43513 233 aa15□□□□□ -0.01
LDB3-207ENST00000542786 KRT14P02533 472 aa15□□□□□ -0.01
LDB3-207ENST00000542786 SLC10A3P09131 477 aa15□□□□□ -0.01
LDB3-207ENST00000542786 GOLGA6DP0CG33 693 aa15□□□□□ -0.01
LDB3-207ENST00000542786 RALAP11233 206 aa15□□□□□ -0.01
LDB3-207ENST00000542786 CYP2C9P11712 490 aa15□□□□□ -0.01
LDB3-207ENST00000542786 CD19P15391 556 aa15□□□□□ -0.01
LDB3-207ENST00000542786 CTGFP29279 349 aa15□□□□□ -0.01
LDB3-207ENST00000542786 LLGL1Q15334 1064 aa15□□□□□ -0.01
LDB3-207ENST00000542786 PCBP1Q15365 356 aaKnown RBP eCLIP15□□□□□ -0.01
LDB3-207ENST00000542786 SGO2Q562F6 1265 aa15□□□□□ -0.01
LDB3-207ENST00000542786 SPDYCQ5MJ68 293 aa15□□□□□ -0.01
LDB3-207ENST00000542786 CHADLQ6NUI6 762 aa15□□□□□ -0.01
LDB3-207ENST00000542786 SLC27A1Q6PCB7 646 aa15□□□□□ -0.01
LDB3-207ENST00000542786 ZNF771Q7L3S4 317 aaPredicted RBP15□□□□□ -0.01
LDB3-207ENST00000542786 SAPCD2Q86UD0 394 aa15□□□□□ -0.01
LDB3-207ENST00000542786 TMEM40Q8WWA1 233 aa15□□□□□ -0.01
LDB3-207ENST00000542786 TMEM176AQ96HP8 235 aa15□□□□□ -0.01
LDB3-207ENST00000542786 APBA2Q99767 749 aa15□□□□□ -0.01
LDB3-207ENST00000542786 GOLGA6AQ9NYA3 693 aa15□□□□□ -0.01
LDB3-207ENST00000542786 F8VP50 259 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 PPEF2O14830 753 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 ECM2O94769 699 aaPredicted RBP14.99□□□□□ -0.01
LDB3-207ENST00000542786 MICAL2O94851 1124 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 ERBB2P04626 1255 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 IVDP26440 423 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 GBP1P32455 592 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 PTPN7P35236 360 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 GABRB2P47870 512 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 DHX9Q08211 1270 aaKnown RBP14.99□□□□□ -0.01
LDB3-207ENST00000542786 ZNF844Q08AG5 666 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 MTMR3Q13615 1198 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 EMC10Q5UCC4 262 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 ARFGAP1Q8N6T3 406 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 FBXO25Q8TCJ0 367 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 MAIP1Q8WWC4 291 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 ATG4AQ8WYN0 398 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 ART4Q93070 314 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 KIF12Q96FN5 646 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 CPXM1Q96SM3 734 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 OSMRQ99650 979 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 STRIP2Q9ULQ0 834 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 BARX2Q9UMQ3 279 aaPredicted RBP14.99□□□□□ -0.01
LDB3-207ENST00000542786 PDCD11Q14690 1871 aaKnown RBP14.99□□□□□ -0.01
LDB3-207ENST00000542786 SIGLEC16A6NMB1 481 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 FAM155AB1AL88 458 aaPredicted RBP14.99□□□□□ -0.01
LDB3-207ENST00000542786 SHOX2O60902 331 aaPredicted RBP14.99□□□□□ -0.01
LDB3-207ENST00000542786 P4HA1P13674 534 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 RGS2P41220 211 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 ZNF200P98182 395 aaPredicted RBP14.99□□□□□ -0.01
LDB3-207ENST00000542786 SNX17Q15036 470 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 CNGA2Q16280 664 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 ATP13A4Q4VNC1 1196 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 UBXN11Q5T124 520 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 TXNRD3NBQ6F5E7 133 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 RGMBQ6NW40 437 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 CATSPER4Q7RTX7 472 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 XYLT1Q86Y38 959 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 FAM76AQ8TAV0 307 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 SLITRK1Q96PX8 696 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 OSBPL8Q9BZF1 889 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 TMBIM4Q9HC24 238 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 SNTG2Q9NY99 539 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 CNTN3Q9P232 1028 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 USTQ9Y2C2 406 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 CEP83Q9Y592 693 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 NME7Q9Y5B8 376 aa14.99□□□□□ -0.01
LDB3-207ENST00000542786 TREHO43280 583 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 ECEL1O95672 775 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 HMGCRP04035 888 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 VDRP11473 427 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 CYP2B6P20813 491 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 RFC1P35251 1148 aaPredicted RBP14.98□□□□□ -0.01
LDB3-207ENST00000542786 GPD2P43304 727 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 LMAN1P49257 510 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 NDST1P52848 882 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 BEX3Q00994 111 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 PTK6Q13882 451 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 PIGHQ14442 188 aaPredicted RBP14.98□□□□□ -0.01
LDB3-207ENST00000542786 XKR4Q5GH76 650 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 NOTUMQ6P988 496 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 RHBDF2Q6PJF5 856 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 CCDC105Q8IYK2 499 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 TRPV1Q8NER1 839 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 JOSD2Q8TAC2 188 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 FNIP1Q8TF40 1166 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 DNAJB3Q8WWF6 145 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 SOCS4Q8WXH5 440 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 MCRS1Q96EZ8 462 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 RUFY1Q96T51 708 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 FAM129AQ9BZQ8 928 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 TUBGCP4Q9UGJ1 667 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 TRIP11Q15643 1979 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 PASKQ96RG2 1323 aa14.98□□□□□ -0.01
LDB3-207ENST00000542786 C3orf70A6NLC5 250 aaPredicted RBP14.97□□□□□ -0.01
LDB3-207ENST00000542786 PFKMP08237 780 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms