RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 K7EQS6 105 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 IPO8O15397 1037 aaKnown RBP3.62□□□□□ -1.83
CHD4-209ENST00000542717 MTSS1O43312 755 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 PCDHGA12O60330 932 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 SYNCRIPO60506 623 aaKnown RBP3.62□□□□□ -1.83
CHD4-209ENST00000542717 RTN2O75298 545 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 B3GAT3O94766 335 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 FGF19O95750 216 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 DDAH2O95865 285 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 MT-CO3P00414 261 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 OATP04181 439 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 ITGAVP06756 1048 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 SRGAP2CP0DJJ0 459 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 NCAM1P13591 858 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 HOXB2P14652 356 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 GABRG2P18507 467 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 FGFR3P22607 806 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 GNLYP22749 145 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 UQCRFS1P47985 274 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 LSSP48449 732 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 ACADVLP49748 655 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 BNC1Q01954 994 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 USP4Q13107 963 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 ITGB3BPQ13352 177 aaPredicted RBP3.62□□□□□ -1.83
CHD4-209ENST00000542717 TBR1Q16650 682 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 KIF19Q2TAC6 998 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 HSF5Q4G112 596 aaPredicted RBP3.62□□□□□ -1.83
CHD4-209ENST00000542717 CTXN3Q4LDR2 81 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 C3orf38Q5JPI3 329 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 EMC10Q5UCC4 262 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 DCAF12L1Q5VU92 463 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 TPGS2Q68CL5 300 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 NOTUMQ6P988 496 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 KIAA1324Q6UXG2 1013 aaKnown RBP3.62□□□□□ -1.83
CHD4-209ENST00000542717 ADAT2Q7Z6V5 191 aaKnown RBP3.62□□□□□ -1.83
CHD4-209ENST00000542717 CATIPQ7Z7H3 387 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 HEATR4Q86WZ0 1026 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 GATAD2AQ86YP4 633 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 EID2Q8N6I1 236 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 EFCAB3Q8N7B9 438 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 IL17RCQ8NAC3 791 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 ZSCAN1Q8NBB4 408 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 OXER1Q8TDS5 423 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 PIGOQ8TEQ8 1089 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 FRAT1Q92837 279 aaPredicted RBP3.62□□□□□ -1.83
CHD4-209ENST00000542717 ATP2A3Q93084 1043 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 MIB2Q96AX9 1013 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 MTMR8Q96EF0 704 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 GPATCH3Q96I76 525 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 ACAP3Q96P50 834 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 GPR174Q9BXC1 333 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 EIF2AQ9BY44 585 aaKnown RBP3.62□□□□□ -1.83
CHD4-209ENST00000542717 KDM4CQ9H3R0 1056 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 NXF3Q9H4D5 531 aaKnown RBP3.62□□□□□ -1.83
CHD4-209ENST00000542717 POLR1BQ9H9Y6 1135 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 AGO4Q9HCK5 861 aaKnown RBP3.62□□□□□ -1.83
CHD4-209ENST00000542717 CASS4Q9NQ75 786 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 CUEDC1Q9NWM3 386 aaPredicted RBP3.62□□□□□ -1.83
CHD4-209ENST00000542717 DUS2Q9NX74 493 aaKnown RBP3.62□□□□□ -1.83
CHD4-209ENST00000542717 ADAMTS1Q9UHI8 967 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 EIF2B4Q9UI10 523 aaKnown RBP3.62□□□□□ -1.83
CHD4-209ENST00000542717 ANAPC4Q9UJX5 808 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 PHTF1Q9UMS5 762 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 YIPF1Q9Y548 306 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 MAFBQ9Y5Q3 323 aaPredicted RBP3.62□□□□□ -1.83
CHD4-209ENST00000542717 SNX11Q9Y5W9 270 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 ADGRG4Q8IZF6 3080 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 KNL1Q8NG31 2342 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 SDK2Q58EX2 2172 aa3.62□□□□□ -1.83
CHD4-209ENST00000542717 MYH9P35579 1960 aaKnown RBP3.62□□□□□ -1.83
CHD4-209ENST00000542717 LRRK1Q38SD2 2015 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 BAZ2BQ9UIF8 2168 aaKnown RBP3.61□□□□□ -1.83
CHD4-209ENST00000542717 NF1P21359 2839 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 MYMKA6NI61 221 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 H0Y8X5 98 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 PIK3CDO00329 1044 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 MEIS2O14770 477 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 N4BP3O15049 544 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 EFSO43281 561 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 HNRNPRO43390 633 aaKnown RBP3.61□□□□□ -1.83
CHD4-209ENST00000542717 SEMA7AO75326 666 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 DXOO77932 396 aaKnown RBP3.61□□□□□ -1.83
CHD4-209ENST00000542717 APODP05090 189 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 THP07101 528 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 KRT7P08729 469 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 FGRP09769 529 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 RNF224P0DH78 156 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 CD6P30203 668 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 CDC25CP30307 473 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 HOXA11P31270 313 aaPredicted RBP3.61□□□□□ -1.83
CHD4-209ENST00000542717 ADRA1BP35368 520 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 WASP42768 502 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 BRCC3P46736 316 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 AFF3P51826 1226 aaKnown RBP3.61□□□□□ -1.83
CHD4-209ENST00000542717 E2F1Q01094 437 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 INSM1Q01101 510 aaPredicted RBP3.61□□□□□ -1.83
CHD4-209ENST00000542717 PRKCEQ02156 737 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 ST3GAL1Q11201 340 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 ILKQ13418 452 aa3.61□□□□□ -1.83
CHD4-209ENST00000542717 MTF1Q14872 753 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms