RNA–Protein interactions for RNA: ENST00000542694.2

SPTB-205, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-205ENST00000542694 SOWAHAQ2M3V2 549 aa16.65■□□□□ 0.26
SPTB-205ENST00000542694 PABPC1LQ4VXU2 614 aaKnown RBP16.65■□□□□ 0.26
SPTB-205ENST00000542694 TDRD10Q5VZ19 366 aaKnown RBP16.65■□□□□ 0.26
SPTB-205ENST00000542694 KRT39Q6A163 491 aa16.65■□□□□ 0.26
SPTB-205ENST00000542694 KLHL10Q6JEL2 608 aa16.65■□□□□ 0.26
SPTB-205ENST00000542694 C4orf50Q6ZRC1 276 aa16.65■□□□□ 0.26
SPTB-205ENST00000542694 GRASPQ7Z6J2 395 aaPredicted RBP16.65■□□□□ 0.26
SPTB-205ENST00000542694 FRMD5Q7Z6J6 570 aa16.65■□□□□ 0.26
SPTB-205ENST00000542694 ITIH5Q86UX2 942 aa16.65■□□□□ 0.26
SPTB-205ENST00000542694 RNF135Q8IUD6 432 aa16.65■□□□□ 0.26
SPTB-205ENST00000542694 ZC3H3Q8IXZ2 948 aaKnown RBP16.65■□□□□ 0.26
SPTB-205ENST00000542694 PLEKHO2Q8TD55 490 aa16.65■□□□□ 0.26
SPTB-205ENST00000542694 NELFBQ8WX92 580 aa16.65■□□□□ 0.26
SPTB-205ENST00000542694 GZF1Q9H116 711 aaPredicted RBP16.65■□□□□ 0.26
SPTB-205ENST00000542694 TMEM8AQ9HCN3 771 aa16.65■□□□□ 0.26
SPTB-205ENST00000542694 ABCB6Q9NP58 842 aa16.65■□□□□ 0.26
SPTB-205ENST00000542694 DACH1Q9UI36 760 aa16.65■□□□□ 0.26
SPTB-205ENST00000542694 MTMR11A4FU01 709 aa16.64■□□□□ 0.25
SPTB-205ENST00000542694 PPP1R3GB7ZBB8 358 aa16.64■□□□□ 0.25
SPTB-205ENST00000542694 DCXO43602 365 aa16.64■□□□□ 0.25
SPTB-205ENST00000542694 MICAL2O94851 1124 aa16.64■□□□□ 0.25
SPTB-205ENST00000542694 SEC24AO95486 1093 aa16.64■□□□□ 0.25
SPTB-205ENST00000542694 MBD3O95983 291 aa16.64■□□□□ 0.25
SPTB-205ENST00000542694 GBP2P32456 591 aaPredicted RBP16.64■□□□□ 0.25
SPTB-205ENST00000542694 PIK3CAP42336 1068 aa16.64■□□□□ 0.25
SPTB-205ENST00000542694 DLG4P78352 724 aa16.64■□□□□ 0.25
SPTB-205ENST00000542694 TWF1Q12792 350 aa16.64■□□□□ 0.25
SPTB-205ENST00000542694 CETN1Q12798 172 aa16.64■□□□□ 0.25
SPTB-205ENST00000542694 INTS6LQ5JSJ4 861 aaKnown RBP16.64■□□□□ 0.25
SPTB-205ENST00000542694 OR10T2Q8NGX3 314 aa16.64■□□□□ 0.25
SPTB-205ENST00000542694 FUBP3Q96I24 572 aaKnown RBP eCLIP16.64■□□□□ 0.25
SPTB-205ENST00000542694 PGLYRP2Q96PD5 576 aa16.64■□□□□ 0.25
SPTB-205ENST00000542694 XYLT2Q9H1B5 865 aa16.64■□□□□ 0.25
SPTB-205ENST00000542694 IGSF9Q9P2J2 1179 aa16.64■□□□□ 0.25
SPTB-205ENST00000542694 NXF1Q9UBU9 619 aaKnown RBP16.64■□□□□ 0.25
SPTB-205ENST00000542694 C5orf42Q9H799 3197 aa16.64■□□□□ 0.25
SPTB-205ENST00000542694 C2CD4DB7Z1M9 353 aa16.63■□□□□ 0.25
SPTB-205ENST00000542694 PI4K2BG5E9Z4 385 aa16.63■□□□□ 0.25
SPTB-205ENST00000542694 OR4Q2P0C623 313 aa16.63■□□□□ 0.25
SPTB-205ENST00000542694 RPL10AP62906 217 aaKnown RBP16.63■□□□□ 0.25
SPTB-205ENST00000542694 TAF12Q16514 161 aa16.63■□□□□ 0.25
SPTB-205ENST00000542694 MGAT5BQ3V5L5 792 aa16.63■□□□□ 0.25
SPTB-205ENST00000542694 CT47A1Q5JQC4 288 aaPredicted RBP16.63■□□□□ 0.25
SPTB-205ENST00000542694 WDR44Q5JSH3 913 aa16.63■□□□□ 0.25
SPTB-205ENST00000542694 TTC39CQ8N584 583 aa16.63■□□□□ 0.25
SPTB-205ENST00000542694 ATAD1Q8NBU5 361 aa16.63■□□□□ 0.25
SPTB-205ENST00000542694 OR6B3Q8NGW1 331 aa16.63■□□□□ 0.25
SPTB-205ENST00000542694 RTP3Q9BQQ7 232 aa16.63■□□□□ 0.25
SPTB-205ENST00000542694 C1QTNF1Q9BXJ1 281 aa16.63■□□□□ 0.25
SPTB-205ENST00000542694 CD320Q9NPF0 282 aa16.63■□□□□ 0.25
SPTB-205ENST00000542694 ASAH2Q9NR71 780 aa16.63■□□□□ 0.25
SPTB-205ENST00000542694 EPS15L1Q9UBC2 864 aa16.63■□□□□ 0.25
SPTB-205ENST00000542694 MRPS23Q9Y3D9 190 aaKnown RBP16.63■□□□□ 0.25
SPTB-205ENST00000542694 MYO10Q9HD67 2058 aa16.63■□□□□ 0.25
SPTB-205ENST00000542694 N4BP1O75113 896 aaKnown RBP16.62■□□□□ 0.25
SPTB-205ENST00000542694 ASS1P00966 412 aaKnown RBP16.62■□□□□ 0.25
SPTB-205ENST00000542694 HLA-DRAP01903 254 aa16.62■□□□□ 0.25
SPTB-205ENST00000542694 RHOP08100 348 aa16.62■□□□□ 0.25
SPTB-205ENST00000542694 CD44P16070 742 aaKnown RBP16.62■□□□□ 0.25
SPTB-205ENST00000542694 BMP6P22004 513 aa16.62■□□□□ 0.25
SPTB-205ENST00000542694 GCLMP48507 274 aa16.62■□□□□ 0.25
SPTB-205ENST00000542694 CCDC40Q4G0X9 1142 aa16.62■□□□□ 0.25
SPTB-205ENST00000542694 TCERG1LQ5VWI1 586 aa16.62■□□□□ 0.25
SPTB-205ENST00000542694 TTI2Q6NXR4 508 aa16.62■□□□□ 0.25
SPTB-205ENST00000542694 PDZD4Q76G19 769 aaPredicted RBP16.62■□□□□ 0.25
SPTB-205ENST00000542694 SPATA2LQ8IUW3 424 aaPredicted RBP16.62■□□□□ 0.25
SPTB-205ENST00000542694 FBXL13Q8NEE6 735 aa16.62■□□□□ 0.25
SPTB-205ENST00000542694 FAM84AQ96KN4 292 aa16.62■□□□□ 0.25
SPTB-205ENST00000542694 TNIP3Q96KP6 325 aa16.62■□□□□ 0.25
SPTB-205ENST00000542694 CEP295NLQ96MC4 621 aa16.62■□□□□ 0.25
SPTB-205ENST00000542694 TMEM209Q96SK2 561 aa16.62■□□□□ 0.25
SPTB-205ENST00000542694 SYT15Q9BQS2 421 aa16.62■□□□□ 0.25
SPTB-205ENST00000542694 GPR88Q9GZN0 384 aa16.62■□□□□ 0.25
SPTB-205ENST00000542694 FAM124BQ9H5Z6 455 aaPredicted RBP16.62■□□□□ 0.25
SPTB-205ENST00000542694 CYP3A43Q9HB55 503 aa16.62■□□□□ 0.25
SPTB-205ENST00000542694 ABI2Q9NYB9 513 aaPredicted RBP16.62■□□□□ 0.25
SPTB-205ENST00000542694 GDE1Q9NZC3 331 aa16.62■□□□□ 0.25
SPTB-205ENST00000542694 DNMT3BQ9UBC3 853 aaKnown RBP16.62■□□□□ 0.25
SPTB-205ENST00000542694 MAGEC2Q9UBF1 373 aaPredicted RBP16.62■□□□□ 0.25
SPTB-205ENST00000542694 LIMD1Q9UGP4 676 aa16.62■□□□□ 0.25
SPTB-205ENST00000542694 RWDD2AQ9UIY3 292 aa16.62■□□□□ 0.25
SPTB-205ENST00000542694 CDH22Q9UJ99 828 aa16.62■□□□□ 0.25
SPTB-205ENST00000542694 CDH7Q9ULB5 785 aa16.62■□□□□ 0.25
SPTB-205ENST00000542694 CTNND2Q9UQB3 1225 aa16.62■□□□□ 0.25
SPTB-205ENST00000542694 YIPF1Q9Y548 306 aa16.62■□□□□ 0.25
SPTB-205ENST00000542694 C2orf16Q68DN1 1984 aa16.61■□□□□ 0.25
SPTB-205ENST00000542694 TRIM49BA6NDI0 452 aa16.61■□□□□ 0.25
SPTB-205ENST00000542694 A8MXQ7 604 aa16.61■□□□□ 0.25
SPTB-205ENST00000542694 VNN1O95497 513 aa16.61■□□□□ 0.25
SPTB-205ENST00000542694 TRIM49P0CI25 452 aa16.61■□□□□ 0.25
SPTB-205ENST00000542694 TRIM49CP0CI26 452 aa16.61■□□□□ 0.25
SPTB-205ENST00000542694 CCDC192P0DO97 292 aa16.61■□□□□ 0.25
SPTB-205ENST00000542694 HAPLN1P10915 354 aaPredicted RBP16.61■□□□□ 0.25
SPTB-205ENST00000542694 LAMP2P13473 410 aa16.61■□□□□ 0.25
SPTB-205ENST00000542694 PRKCSHP14314 528 aaPredicted RBP16.61■□□□□ 0.25
SPTB-205ENST00000542694 MXI1P50539 228 aa16.61■□□□□ 0.25
SPTB-205ENST00000542694 PMS1P54277 932 aaKnown RBP16.61■□□□□ 0.25
SPTB-205ENST00000542694 CFAP221Q4G0U5 840 aa16.61■□□□□ 0.25
SPTB-205ENST00000542694 DCAF17Q5H9S7 520 aaPredicted RBP16.61■□□□□ 0.25
SPTB-205ENST00000542694 C1orf220Q5T0J3 134 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms