RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 SSU72P8A0A1W2PR75 194 aa13.16□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 ARHGEF37A1IGU5 675 aa13.16□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 ARHGAP6O43182 974 aa13.16□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 AMHP03971 560 aa13.16□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 TAF6P49848 677 aa13.16□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 DSC1Q08554 894 aa13.16□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 RAPGEF1Q13905 1077 aa13.16□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 DRAP1Q14919 205 aaPredicted RBP13.16□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 CLLU1OSQ5K130 101 aa13.16□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 CYP26C1Q6V0L0 522 aa13.16□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 DPH6Q7L8W6 267 aa13.16□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 FBXO22Q8NEZ5 403 aa13.16□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 SPATA18Q8TC71 538 aa13.16□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 C18orf25Q96B23 403 aaPredicted RBP13.16□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 KREMEN1Q96MU8 473 aa13.16□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 PI4K2AQ9BTU6 479 aa13.16□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 BCO2Q9BYV7 579 aa13.16□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 GPR88Q9GZN0 384 aa13.16□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 APOBEC3GQ9HC16 384 aaKnown RBP13.16□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 RNF19AQ9NV58 838 aa13.16□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 GDAP2Q9NXN4 497 aa13.16□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 CNTN6Q9UQ52 1028 aa13.16□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 NUB1Q9Y5A7 615 aa13.16□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 SCN1AP35498 2009 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 ZZEF1O43149 2961 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 TMEM189-UBE2V1I3L0A0 370 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 RNF225M0QZC1 329 aaPredicted RBP13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 GFPT2O94808 682 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 GJB5O95377 273 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 SERPING1P05155 500 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 ASPAP45381 313 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 BPIFB4P59827 614 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 TNNC1P63316 161 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 CCZ1BP86790 482 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 CCZ1P86791 482 aaPredicted RBP13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 APBA1Q02410 837 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 SOX4Q06945 474 aaPredicted RBP13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 LRMPQ12912 555 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 SMAD4Q13485 552 aaKnown RBP13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 CLUL1Q15846 466 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 ASIC2Q16515 512 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 PTPROQ16827 1216 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 TCTN1Q2MV58 587 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 CTC1Q2NKJ3 1217 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 WDR72Q3MJ13 1102 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 GJB7Q6PEY0 223 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 TMEM139Q8IV31 216 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 FAM71AQ8IYT1 594 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 CCDC170Q8IYT3 715 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 LRRC43Q8N309 656 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 UBR7Q8N806 425 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 TATDN2Q93075 761 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 FAM84AQ96KN4 292 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 RAD9AQ99638 391 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 C17orf80Q9BSJ5 609 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 ZBED2Q9BTP6 218 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 DNAI2Q9GZS0 605 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 CXCL16Q9H2A7 254 aa13.15□□□□□ -0.3
CACNA1C-IT3-201ENST00000542680 LOC730098B7Z3J9 87 aa13.14□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 PODXLO00592 558 aa13.14□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 LRRN2O75325 713 aa13.14□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 CLSTN1O94985 981 aa13.14□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 AARSP49588 968 aaKnown RBP eCLIP13.14□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 GUCY2FP51841 1108 aa13.14□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 DEFB103AP81534 67 aa13.14□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 DLX2Q07687 328 aaPredicted RBP13.14□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 INCA1Q0VD86 236 aa13.14□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 CBX2Q14781 532 aaPredicted RBP13.14□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 UPP1Q16831 310 aa13.14□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 ARHGAP44Q17R89 818 aa13.14□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 WDR59Q6PJI9 974 aa13.14□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 TOP6BLQ8N6T0 577 aa13.14□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 TOP1MTQ969P6 601 aa13.14□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 TMEM175Q9BSA9 504 aa13.14□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 TBC1D13Q9NVG8 400 aa13.14□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 MIOSQ9NXC5 875 aa13.14□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 DLL3Q9NYJ7 618 aa13.14□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 AJAP1Q9UKB5 411 aaPredicted RBP13.14□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 INPP5FQ9Y2H2 1132 aa13.14□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 ASH1LQ9NR48 2969 aaKnown RBP13.14□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 KPNA7A9QM74 516 aa13.13□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 TACC1O75410 805 aa13.13□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 DGKIO75912 1065 aa13.13□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 PDGFBP01127 241 aaPredicted RBP13.13□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 POMCP01189 267 aa13.13□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 FGFR1P11362 822 aa13.13□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 SKILP12757 684 aa13.13□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 ACO1P21399 889 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 LILRA4P59901 499 aa13.13□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 HGSNATQ68CP4 663 aa13.13□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 SPOPLQ6IQ16 392 aa13.13□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 DCLRE1AQ6PJP8 1040 aa13.13□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 LIMS2Q7Z4I7 341 aa13.13□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 IRF2BP2Q7Z5L9 587 aa13.13□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 VPS36Q86VN1 386 aa13.13□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 ZNF677Q86XU0 584 aa13.13□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 CASD1Q96PB1 797 aa13.13□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 FAM193BQ96PV7 902 aaPredicted RBP13.13□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 KCNF1Q9H3M0 494 aa13.13□□□□□ -0.31
CACNA1C-IT3-201ENST00000542680 NSUN3Q9H649 340 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms