RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 TAS2R40P59535 323 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 LACTBP83111 547 aaPredicted RBP10.42□□□□□ -0.74
SS18-205ENST00000542420 SLC29A2Q14542 456 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 HADHQ16836 314 aaKnown RBP10.42□□□□□ -0.74
SS18-205ENST00000542420 ODF2Q5BJF6 829 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 TFDP3Q5H9I0 405 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 ZNF365Q70YC5 407 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 PCGF5Q86SE9 256 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 PNMA8AQ86V59 439 aaPredicted RBP10.42□□□□□ -0.74
SS18-205ENST00000542420 TAX1BP1Q86VP1 789 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 THNSL1Q8IYQ7 743 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 LRRC71Q8N4P6 559 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 MYCBPAPQ8TBZ2 947 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 ZNF473Q8WTR7 871 aaKnown RBP10.42□□□□□ -0.74
SS18-205ENST00000542420 INO80BQ9C086 356 aaPredicted RBP10.42□□□□□ -0.74
SS18-205ENST00000542420 IFT122Q9HBG6 1241 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 CHST7Q9NS84 486 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 LGALS13Q9UHV8 139 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 TTLL13PA6NNM8 815 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 RASGRF2O14827 1237 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 TP73O15350 636 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 CILPO75339 1184 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 TTC4O95801 387 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 ITGAVP06756 1048 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 SETSIPP0DME0 302 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 HARSP12081 509 aaKnown RBP10.42□□□□□ -0.74
SS18-205ENST00000542420 ATP1A2P50993 1020 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 GTF2A2P52657 109 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 MAGOHP61326 146 aaKnown RBP10.42□□□□□ -0.74
SS18-205ENST00000542420 TFAMQ00059 246 aaKnown RBP10.42□□□□□ -0.74
SS18-205ENST00000542420 TTLL12Q14166 644 aaPredicted RBP10.42□□□□□ -0.74
SS18-205ENST00000542420 CNGA2Q16280 664 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 ERMARDQ5T6L9 678 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 C9orf131Q5VYM1 1079 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 DCUN1D2Q6PH85 259 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 SPOCD1Q6ZMY3 1216 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 CPNE8Q86YQ8 564 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 CCDC50Q8IVM0 306 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 OR2W6PQ8NHA6 318 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 CXorf38Q8TB03 319 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 C1orf54Q8WWF1 131 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 CCT8L2Q96SF2 557 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 KATNBL1Q9H079 304 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 CHORDC1Q9UHD1 332 aaPredicted RBP10.42□□□□□ -0.74
SS18-205ENST00000542420 ANAPC5Q9UJX4 755 aa10.42□□□□□ -0.74
SS18-205ENST00000542420 hCG_1818297A0A087WSY0 165 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 LIASO43766 372 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 CAND2O75155 1236 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 STAG3L1P0CL83 205 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 INSRRP14616 1297 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 TSHRP16473 764 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 MARK3P27448 753 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 GRM5P41594 1212 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 CCT5P48643 541 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 SNX16P57768 344 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 GUCY1A3Q02108 690 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 NR1H3Q13133 447 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 STAT4Q14765 748 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 HIBCHQ6NVY1 386 aaPredicted RBP10.41□□□□□ -0.74
SS18-205ENST00000542420 EEPD1Q7L9B9 569 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 PASD1Q8IV76 773 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 ZCCHC9Q8N567 271 aaKnown RBP10.41□□□□□ -0.74
SS18-205ENST00000542420 WDTC1Q8N5D0 677 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 USP6NLQ92738 828 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 KAT2BQ92831 832 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 NLRP4Q96MN2 994 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 CCDC77Q9BR77 488 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 TRIM7Q9C029 511 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 DNAI2Q9GZS0 605 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 CDC42EP4Q9H3Q1 356 aaKnown RBP10.41□□□□□ -0.74
SS18-205ENST00000542420 SEMA4AQ9H3S1 761 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 PDZD7Q9H5P4 517 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 AAASQ9NRG9 546 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 FETUBQ9UGM5 382 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 SIX4Q9UIU6 781 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 ZNF487B1APH4 448 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 DNALI1O14645 258 aaPredicted RBP10.41□□□□□ -0.74
SS18-205ENST00000542420 KRT1P04264 644 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 CFHP08603 1231 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 PCK1P35558 622 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 KCNJ1P48048 391 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 ITGA8P53708 1063 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 RAD23BP54727 409 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 PTPN11Q06124 597 aaPredicted RBP10.41□□□□□ -0.74
SS18-205ENST00000542420 ZNF252P-AS1Q0IIN9 211 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 MORF4L2Q15014 288 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 EEF1DP3Q658K8 133 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 IQSEC1Q6DN90 963 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 TRIM50Q86XT4 487 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 ALLCQ8N6M5 410 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 C1orf127Q8N9H9 656 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 SLC10A4Q96EP9 437 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 MCRS1Q96EZ8 462 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 ADPGKQ9BRR6 497 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 PCDH9Q9HC56 1237 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 SHOC2Q9UQ13 582 aa10.41□□□□□ -0.74
SS18-205ENST00000542420 ANKRD65E5RJM6 399 aa10.4□□□□□ -0.74
SS18-205ENST00000542420 MAP2K2P36507 400 aa10.4□□□□□ -0.74
SS18-205ENST00000542420 VCPP55072 806 aaKnown RBP10.4□□□□□ -0.74
SS18-205ENST00000542420 RBP5P82980 135 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms