RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 CDC42EP1Q00587 391 aa18.29■□□□□ 0.52
TMEM50B-210ENST00000542230 ZNF618Q5T7W0 954 aa18.29■□□□□ 0.52
TMEM50B-210ENST00000542230 ZFP42Q96MM3 310 aa18.29■□□□□ 0.52
TMEM50B-210ENST00000542230 FAM118BQ9BPY3 351 aa18.29■□□□□ 0.52
TMEM50B-210ENST00000542230 MTG1Q9BT17 334 aaPredicted RBP18.29■□□□□ 0.52
TMEM50B-210ENST00000542230 HEMGNQ9BXL5 484 aa18.29■□□□□ 0.52
TMEM50B-210ENST00000542230 GTF2IRD1Q9UHL9 959 aa18.29■□□□□ 0.52
TMEM50B-210ENST00000542230 IPPQ9Y573 584 aa18.29■□□□□ 0.52
TMEM50B-210ENST00000542230 DCAF8L1A6NGE4 600 aa18.28■□□□□ 0.52
TMEM50B-210ENST00000542230 ERBB2P04626 1255 aa18.28■□□□□ 0.52
TMEM50B-210ENST00000542230 FLT3P36888 993 aa18.28■□□□□ 0.52
TMEM50B-210ENST00000542230 YARSP54577 528 aaKnown RBP18.28■□□□□ 0.52
TMEM50B-210ENST00000542230 SEL1L2Q5TEA6 688 aa18.28■□□□□ 0.52
TMEM50B-210ENST00000542230 JOSD2Q8TAC2 188 aa18.28■□□□□ 0.52
TMEM50B-210ENST00000542230 CDY2AQ9Y6F7 541 aa18.28■□□□□ 0.52
TMEM50B-210ENST00000542230 GRIN2DO15399 1336 aa18.28■□□□□ 0.52
TMEM50B-210ENST00000542230 TULP2O00295 520 aa18.28■□□□□ 0.52
TMEM50B-210ENST00000542230 SEPT4O43236 478 aa18.28■□□□□ 0.52
TMEM50B-210ENST00000542230 ADAMTS4O75173 837 aa18.28■□□□□ 0.52
TMEM50B-210ENST00000542230 PRKAR2AP13861 404 aaKnown RBP18.28■□□□□ 0.52
TMEM50B-210ENST00000542230 TNFRSF8P28908 595 aa18.28■□□□□ 0.52
TMEM50B-210ENST00000542230 RFC1P35251 1148 aaPredicted RBP18.28■□□□□ 0.52
TMEM50B-210ENST00000542230 PPP1R15BQ5SWA1 713 aa18.28■□□□□ 0.52
TMEM50B-210ENST00000542230 DNAJC24Q6P3W2 148 aa18.28■□□□□ 0.52
TMEM50B-210ENST00000542230 C1orf54Q8WWF1 131 aa18.28■□□□□ 0.52
TMEM50B-210ENST00000542230 PLEKHA5Q9HAU0 1116 aa18.28■□□□□ 0.52
TMEM50B-210ENST00000542230 MRPL47Q9HD33 250 aaKnown RBP18.28■□□□□ 0.52
TMEM50B-210ENST00000542230 CNTN3Q9P232 1028 aa18.28■□□□□ 0.52
TMEM50B-210ENST00000542230 BARX2Q9UMQ3 279 aaPredicted RBP18.28■□□□□ 0.52
TMEM50B-210ENST00000542230 BHMG1C9JSJ3 638 aaPredicted RBP18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 AGPSO00116 658 aa18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 CHRNA1P02708 482 aa18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 ASGR1P07306 291 aa18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 PAEPP09466 180 aa18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 RARBP10826 455 aa18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 YWHAEP62258 255 aaKnown RBP18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 NFX1Q12986 1120 aaKnown RBP18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 KCNA10Q16322 511 aa18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 C9orf57Q5W0N0 161 aa18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 TWF2Q6IBS0 349 aaKnown RBP18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 ACOT1Q86TX2 421 aa18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 EMC1Q8N766 993 aa18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 ATG4AQ8WYN0 398 aa18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 XPNPEP3Q9NQH7 507 aa18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 PI4K2BG5E9Z4 385 aa18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 M0QYV0 167 aa18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 EPHB4P54760 987 aa18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 ADCY2Q08462 1091 aa18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 INCA1Q0VD86 236 aa18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 HLTFQ14527 1009 aaKnown RBP eCLIP18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 DCUN1D2Q6PH85 259 aa18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 MAGOHBQ96A72 148 aaKnown RBP18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 PIWIL1Q96J94 861 aaKnown RBP18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 DPEP3Q9H4B8 488 aa18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 SLITRK6Q9H5Y7 841 aa18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 CYP3A43Q9HB55 503 aa18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 FAM49BQ9NUQ9 324 aa18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 SCINQ9Y6U3 715 aa18.27■□□□□ 0.52
TMEM50B-210ENST00000542230 CALB1P05937 261 aa18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 GNAT1P11488 350 aa18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 IBSPP21815 317 aaPredicted RBP18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 GGCXP38435 758 aa18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 GPD2P43304 727 aa18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 MRPS6P82932 125 aaKnown RBP18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 DR1Q01658 176 aa18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 SOWAHAQ2M3V2 549 aa18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 CAPNS2Q96L46 248 aa18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 R3HDM2Q9Y2K5 976 aaKnown RBP18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 PTPN22Q9Y2R2 807 aa18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 TRPA1O75762 1119 aa18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 SYF2O95926 243 aaKnown RBP18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 PTGIRP43119 386 aa18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 PSMC1P62191 440 aaKnown RBP18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 SNX1Q13596 522 aa18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 CCDC142Q17RM4 750 aa18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 CD302Q8IX05 232 aa18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 RUBCNQ92622 972 aa18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 LPPQ93052 612 aa18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 ZNF518BQ9C0D4 1074 aa18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 UPF3AQ9H1J1 476 aaKnown RBP18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 LHX5Q9H2C1 402 aa18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 AGO3Q9H9G7 860 aaKnown RBP18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 ST3GAL5Q9UNP4 418 aa18.26■□□□□ 0.51
TMEM50B-210ENST00000542230 PFKMP08237 780 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 FGFR1P11362 822 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 P4HA1P13674 534 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 LMO2P25791 158 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 SLC1A1P43005 524 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 SP3Q02447 781 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 MYO1EQ12965 1108 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 PPP1R26Q5T8A7 1209 aaPredicted RBP18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 NT5DC4Q86YG4 428 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 ARFGAP1Q8N6T3 406 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 RNF25Q96BH1 459 aaPredicted RBP18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 NAP1L3Q99457 506 aaPredicted RBP18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 CHST7Q9NS84 486 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 TSPAN16Q9UKR8 245 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 CEP83Q9Y592 693 aa18.25■□□□□ 0.51
TMEM50B-210ENST00000542230 GOLGA6L10A0A0M3HER8 536 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms