RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 PHLDB2Q86SQ0 1253 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 TMTC1Q8IUR5 882 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 WDR49Q8IV35 697 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 PASD1Q8IV76 773 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 LNX1Q8TBB1 728 aaPredicted RBP8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 U2AF1L4Q8WU68 220 aaKnown RBP8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 KCNN1Q92952 543 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 NT5C1BQ96P26 610 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 WDR24Q96S15 920 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 LPIN3Q9BQK8 851 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 PAAF1Q9BRP4 392 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 SMYD3Q9H7B4 428 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 KCND1Q9NSA2 647 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 C1orf112Q9NSG2 853 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 SALL4Q9UJQ4 1053 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 GUCA1BQ9UMX6 200 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 SZT2Q5T011 3432 aa8.28□□□□□ -1.08
AC005840.3-201ENST00000541888 ARVCFO00192 962 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 DNM1LO00429 736 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 NRDCO43847 1150 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 LZTS3O60299 673 aaPredicted RBP8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 N4BP1O75113 896 aaKnown RBP8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 MMEP08473 750 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 CCDC175P0C221 793 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 CETN1Q12798 172 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 PAK2Q13177 524 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 CCDC142Q17RM4 750 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 DUOXA2Q1HG44 320 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 ZNF699Q32M78 642 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 EML3Q32P44 896 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 WDR72Q3MJ13 1102 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 TRIM60Q495X7 471 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 LLGL2Q6P1M3 1020 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 TMEM270Q6UE05 265 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 TMCO2Q7Z6W1 182 aaPredicted RBP8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 NOP9Q86U38 636 aaKnown RBP8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 RSPH3Q86UC2 560 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 HASPINQ8TF76 798 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 CCDC51Q96ER9 411 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 ZNF333Q96JL9 665 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 SNX27Q96L92 541 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 ADAM2Q99965 735 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 STK33Q9BYT3 514 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 SDCBP2Q9H190 292 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 XYLT2Q9H1B5 865 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 GOLPH3Q9H4A6 298 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 MIOSQ9NXC5 875 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 AGAP1Q9UPQ3 857 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 PHF24Q9UPV7 400 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 INPP5FQ9Y2H2 1132 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 COQ4Q9Y3A0 265 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 PCDHB2Q9Y5E7 798 aa8.27□□□□□ -1.09
AC005840.3-201ENST00000541888 TMEM229AB2RXF0 380 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 DDX3XO00571 662 aaKnown RBP eCLIP8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 PTGESO14684 152 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 BUB1O43683 1085 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 POMCP01189 267 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 TNNC2P02585 160 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 TUBB4AP04350 444 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 SERPING1P05155 500 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 ATF7P17544 494 aaPredicted RBP8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 ABCB4P21439 1286 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 HNRNPH3P31942 346 aaKnown RBP8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 CYP2C18P33260 490 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 STAT1P42224 750 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 ARHGAP25P42331 645 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 PRMT2P55345 433 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 PTK7Q13308 1070 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 TRPC3Q13507 836 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 GPNMBQ14956 572 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 ASTE1Q2TB18 679 aaPredicted RBP8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 FOXR1Q6PIV2 292 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 DPH6Q7L8W6 267 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 CTU1Q7Z7A3 348 aaKnown RBP8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 DEFB128Q7Z7B8 93 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 KIAA1328Q86T90 577 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 FAM126BQ8IXS8 530 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 NME8Q8N427 588 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 SLC30A5Q8TAD4 765 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 CXorf38Q8TB03 319 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 LINC01599Q8WXQ3 324 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 GTPBP3Q969Y2 492 aaKnown RBP8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 ANKRD36BP1Q96IX9 119 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 GAD1Q99259 594 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 IFIH1Q9BYX4 1025 aaKnown RBP8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 FAM105AQ9NUU6 356 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 DPP3Q9NY33 737 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 AIPL1Q9NZN9 384 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 PUF60Q9UHX1 559 aaKnown RBP8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 ATP11BQ9Y2G3 1177 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 SMIM28A0A1B0GU29 152 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 CASTOR2A6NHX0 329 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 I3L4J1 428 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 KIAA0391O15091 583 aaKnown RBP8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 NBNO60934 754 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 ASS1P00966 412 aaKnown RBP8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 FGFR1P11362 822 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 ASPAP45381 313 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 GATMP50440 423 aa8.26□□□□□ -1.09
AC005840.3-201ENST00000541888 SCNN1GP51170 649 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms