RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 USP1O94782 785 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 SOX6P35712 828 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 TGM3Q08188 693 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 GSTA3Q16772 222 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 CAPRIN2Q6IMN6 1127 aaKnown RBP11.19□□□□□ -0.62
GABRB3-204ENST00000541819 STAG2Q8N3U4 1231 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 OSBPL6Q9BZF3 934 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 ARHGEF3Q9NR81 526 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 NEU2Q9Y3R4 380 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 CDY2AQ9Y6F7 541 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 CDY1Q9Y6F8 540 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 TTLL13PA6NNM8 815 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 ALBP02768 609 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 CYP2B6P20813 491 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 NMT1P30419 496 aaKnown RBP11.19□□□□□ -0.62
GABRB3-204ENST00000541819 DPYDQ12882 1025 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 RBM15Q96T37 977 aaKnown RBP eCLIP11.19□□□□□ -0.62
GABRB3-204ENST00000541819 MTA3Q9BTC8 594 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 EMILIN2Q9BXX0 1053 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 LY9Q9HBG7 655 aa11.19□□□□□ -0.62
GABRB3-204ENST00000541819 CPDO75976 1380 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 A0A1W2PQC6 194 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 EGFRP00533 1210 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 WEE2P0C1S8 567 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 SLC2A3P11169 496 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 YWHAQP27348 245 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 ACOT2P49753 483 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 HNRNPH2P55795 449 aaKnown RBP11.18□□□□□ -0.62
GABRB3-204ENST00000541819 TMEM117Q9H0C3 514 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 ENTPD7Q9NQZ7 604 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 SMARCAL1Q9NZC9 954 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 TMCC3Q9ULS5 477 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 MTO1Q9Y2Z2 717 aaKnown RBP11.18□□□□□ -0.62
GABRB3-204ENST00000541819 ANXA9O76027 345 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 TCN1P20061 433 aaPredicted RBP11.18□□□□□ -0.62
GABRB3-204ENST00000541819 LTKP29376 864 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 PNPLA4P41247 253 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 ALDH7A1P49419 539 aaKnown RBP11.18□□□□□ -0.62
GABRB3-204ENST00000541819 ATF7IP2Q5U623 682 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 VN1R5Q7Z5H4 357 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 GALNT4Q8N4A0 578 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 TEX13BQ9BXU2 312 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 VPS33BQ9H267 617 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 RSAD1Q9HA92 442 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 NMRK2Q9NPI5 230 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 ATXN3P54252 364 aaPredicted RBP11.18□□□□□ -0.62
GABRB3-204ENST00000541819 TMEM62Q0P6H9 643 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 NECTIN1Q15223 517 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 CYP4A22Q5TCH4 519 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 CNDP1Q96KN2 507 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 XPO6Q96QU8 1125 aaKnown RBP11.18□□□□□ -0.62
GABRB3-204ENST00000541819 GINS4Q9BRT9 223 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 NFKBIZQ9BYH8 718 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 STK33Q9BYT3 514 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 PRRG3Q9BZD7 231 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 MARCOQ9UEW3 520 aaPredicted RBP11.18□□□□□ -0.62
GABRB3-204ENST00000541819 AMACRQ9UHK6 382 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 ADAM21Q9UKJ8 722 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 SLC26A4O43511 780 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 ACADMP11310 421 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 ATP6V1C1P21283 382 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 DGKDQ16760 1214 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 DCAF6Q58WW2 860 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 RNF180Q86T96 592 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 SP8Q8IXZ3 490 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 MICALL2Q8IY33 904 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 PHACTR4Q8IZ21 702 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 SLC30A5Q8TAD4 765 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 LPAR1Q92633 364 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 PNKPQ96T60 521 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 GOLPH3Q9H4A6 298 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 ADAM30Q9UKF2 790 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 GRID1Q9ULK0 1009 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 V9GYQ6 96 aa11.18□□□□□ -0.62
GABRB3-204ENST00000541819 NPHP3-ACAD11A0A0J9YXS1 232 aa11.17□□□□□ -0.62
GABRB3-204ENST00000541819 E2F8A0AVK6 867 aa11.17□□□□□ -0.62
GABRB3-204ENST00000541819 ASS1P00966 412 aaKnown RBP11.17□□□□□ -0.62
GABRB3-204ENST00000541819 NCAM1P13591 858 aa11.17□□□□□ -0.62
GABRB3-204ENST00000541819 RPS6P62753 249 aaKnown RBP11.17□□□□□ -0.62
GABRB3-204ENST00000541819 PLCL1Q15111 1095 aa11.17□□□□□ -0.62
GABRB3-204ENST00000541819 LRRC36Q1X8D7 754 aa11.17□□□□□ -0.62
GABRB3-204ENST00000541819 CENPLQ8N0S6 344 aaPredicted RBP11.17□□□□□ -0.62
GABRB3-204ENST00000541819 SLC35G2Q8TBE7 412 aa11.17□□□□□ -0.62
GABRB3-204ENST00000541819 RNF112Q9ULX5 631 aa11.17□□□□□ -0.62
GABRB3-204ENST00000541819 ATP7BP35670 1465 aa11.17□□□□□ -0.62
GABRB3-204ENST00000541819 SNRPAP09012 282 aaKnown RBP11.17□□□□□ -0.62
GABRB3-204ENST00000541819 FAM200BP0CF97 657 aa11.17□□□□□ -0.62
GABRB3-204ENST00000541819 GEMP55040 296 aa11.17□□□□□ -0.62
GABRB3-204ENST00000541819 FAM83EQ2M2I3 478 aa11.17□□□□□ -0.62
GABRB3-204ENST00000541819 KBTBD12Q3ZCT8 623 aa11.17□□□□□ -0.62
GABRB3-204ENST00000541819 LRIG3Q6UXM1 1119 aa11.17□□□□□ -0.62
GABRB3-204ENST00000541819 GAS2L3Q86XJ1 694 aa11.17□□□□□ -0.62
GABRB3-204ENST00000541819 CCT7Q99832 543 aa11.17□□□□□ -0.62
GABRB3-204ENST00000541819 SCUBE2Q9NQ36 999 aa11.17□□□□□ -0.62
GABRB3-204ENST00000541819 LIMA1Q9UHB6 759 aaKnown RBP11.17□□□□□ -0.62
GABRB3-204ENST00000541819 CHMP2BQ9UQN3 213 aa11.17□□□□□ -0.62
GABRB3-204ENST00000541819 CFAP74Q9C0B2 1584 aa11.17□□□□□ -0.62
GABRB3-204ENST00000541819 RRN3P2A6NIE6 340 aa11.17□□□□□ -0.62
GABRB3-204ENST00000541819 ZW10O43264 779 aa11.17□□□□□ -0.62
GABRB3-204ENST00000541819 SLC25A27O95847 323 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms