RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 MRPS35P82673 323 aaKnown RBP7.63□□□□□ -1.19
YBX3-210ENST00000540975 MLC1Q15049 377 aa7.63□□□□□ -1.19
YBX3-210ENST00000540975 ANO6Q4KMQ2 910 aa7.63□□□□□ -1.19
YBX3-210ENST00000540975 AMOTQ4VCS5 1084 aa7.63□□□□□ -1.19
YBX3-210ENST00000540975 PRR16Q569H4 304 aa7.63□□□□□ -1.19
YBX3-210ENST00000540975 NPNTQ6UXI9 565 aa7.63□□□□□ -1.19
YBX3-210ENST00000540975 FAM46DQ8NEK8 389 aa7.63□□□□□ -1.19
YBX3-210ENST00000540975 PGBD1Q96JS3 809 aa7.63□□□□□ -1.19
YBX3-210ENST00000540975 NT5C1BQ96P26 610 aa7.63□□□□□ -1.19
YBX3-210ENST00000540975 HEPHQ9BQS7 1158 aa7.63□□□□□ -1.19
YBX3-210ENST00000540975 AMBRA1Q9C0C7 1298 aa7.63□□□□□ -1.19
YBX3-210ENST00000540975 LRIT1Q9P2V4 623 aa7.63□□□□□ -1.19
YBX3-210ENST00000540975 ZNHIT2Q9UHR6 403 aa7.63□□□□□ -1.19
YBX3-210ENST00000540975 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.63□□□□□ -1.19
YBX3-210ENST00000540975 A0A0B4J269 797 aa7.62□□□□□ -1.19
YBX3-210ENST00000540975 MPPED1O15442 326 aa7.62□□□□□ -1.19
YBX3-210ENST00000540975 TRIAP1O43715 76 aa7.62□□□□□ -1.19
YBX3-210ENST00000540975 PPP3CBP16298 524 aa7.62□□□□□ -1.19
YBX3-210ENST00000540975 GPSM2P81274 684 aa7.62□□□□□ -1.19
YBX3-210ENST00000540975 TUBB3Q13509 450 aa7.62□□□□□ -1.19
YBX3-210ENST00000540975 ERCC6LQ2NKX8 1250 aa7.62□□□□□ -1.19
YBX3-210ENST00000540975 TOR1AIP2Q8NFQ8 470 aa7.62□□□□□ -1.19
YBX3-210ENST00000540975 FBXL20Q96IG2 436 aa7.62□□□□□ -1.19
YBX3-210ENST00000540975 PDLIM2Q96JY6 352 aa7.62□□□□□ -1.19
YBX3-210ENST00000540975 OSBPL9Q96SU4 736 aa7.62□□□□□ -1.19
YBX3-210ENST00000540975 CNNM1Q9NRU3 951 aa7.62□□□□□ -1.19
YBX3-210ENST00000540975 PIH1D1Q9NWS0 290 aaKnown RBP7.62□□□□□ -1.19
YBX3-210ENST00000540975 POLR2AP24928 1970 aaKnown RBP7.62□□□□□ -1.19
YBX3-210ENST00000540975 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.61□□□□□ -1.19
YBX3-210ENST00000540975 UNC5CO95185 931 aa7.61□□□□□ -1.19
YBX3-210ENST00000540975 NUDT3O95989 172 aa7.61□□□□□ -1.19
YBX3-210ENST00000540975 ITGALP20701 1170 aa7.61□□□□□ -1.19
YBX3-210ENST00000540975 GCLCP48506 637 aaPredicted RBP7.61□□□□□ -1.19
YBX3-210ENST00000540975 SIM1P81133 766 aaPredicted RBP7.61□□□□□ -1.19
YBX3-210ENST00000540975 PTPRRQ15256 657 aa7.61□□□□□ -1.19
YBX3-210ENST00000540975 KAZNQ674X7 775 aa7.61□□□□□ -1.19
YBX3-210ENST00000540975 MYO1HQ8N1T3 1032 aa7.61□□□□□ -1.19
YBX3-210ENST00000540975 SIMC1Q8NDZ2 872 aa7.61□□□□□ -1.19
YBX3-210ENST00000540975 MYCBPAPQ8TBZ2 947 aa7.61□□□□□ -1.19
YBX3-210ENST00000540975 CAGE1Q8TC20 777 aa7.61□□□□□ -1.19
YBX3-210ENST00000540975 RIOX1Q9H6W3 641 aa7.61□□□□□ -1.19
YBX3-210ENST00000540975 C1orf112Q9NSG2 853 aa7.61□□□□□ -1.19
YBX3-210ENST00000540975 MED16Q9Y2X0 877 aa7.61□□□□□ -1.19
YBX3-210ENST00000540975 PLEKHM1Q9Y4G2 1056 aa7.61□□□□□ -1.19
YBX3-210ENST00000540975 COL11A2P13942 1736 aaPredicted RBP7.61□□□□□ -1.19
YBX3-210ENST00000540975 ZAR1LA6NP61 321 aa7.6□□□□□ -1.19
YBX3-210ENST00000540975 CLK3P49761 638 aaKnown RBP7.6□□□□□ -1.19
YBX3-210ENST00000540975 NXPH1P58417 271 aa7.6□□□□□ -1.19
YBX3-210ENST00000540975 ARHGAP29Q52LW3 1261 aa7.6□□□□□ -1.19
YBX3-210ENST00000540975 RBM20Q5T481 1227 aaKnown RBP7.6□□□□□ -1.19
YBX3-210ENST00000540975 COL23A1Q86Y22 540 aaPredicted RBP7.6□□□□□ -1.19
YBX3-210ENST00000540975 B3GALNT2Q8NCR0 500 aa7.6□□□□□ -1.19
YBX3-210ENST00000540975 ACTRT2Q8TDY3 377 aa7.6□□□□□ -1.19
YBX3-210ENST00000540975 TFAP2BQ92481 460 aa7.6□□□□□ -1.19
YBX3-210ENST00000540975 TSR2Q969E8 191 aaKnown RBP7.6□□□□□ -1.19
YBX3-210ENST00000540975 SLC46A1Q96NT5 459 aa7.6□□□□□ -1.19
YBX3-210ENST00000540975 P2RX7Q99572 595 aaKnown RBP7.6□□□□□ -1.19
YBX3-210ENST00000540975 TMEM60Q9H2L4 133 aa7.6□□□□□ -1.19
YBX3-210ENST00000540975 ZMAT3Q9HA38 289 aaKnown RBP7.6□□□□□ -1.19
YBX3-210ENST00000540975 HESX1Q9UBX0 185 aa7.6□□□□□ -1.19
YBX3-210ENST00000540975 DCLK1O15075 740 aa7.59□□□□□ -1.19
YBX3-210ENST00000540975 ERC2O15083 957 aa7.59□□□□□ -1.19
YBX3-210ENST00000540975 THP07101 528 aa7.59□□□□□ -1.19
YBX3-210ENST00000540975 ITIH3Q06033 890 aa7.59□□□□□ -1.19
YBX3-210ENST00000540975 LONRF3Q496Y0 759 aa7.59□□□□□ -1.19
YBX3-210ENST00000540975 KIAA0319LQ8IZA0 1049 aa7.59□□□□□ -1.19
YBX3-210ENST00000540975 SPATA5L1Q9BVQ7 753 aa7.59□□□□□ -1.19
YBX3-210ENST00000540975 B3GNT5Q9BYG0 378 aa7.59□□□□□ -1.19
YBX3-210ENST00000540975 ATP6V0A4Q9HBG4 840 aa7.59□□□□□ -1.19
YBX3-210ENST00000540975 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.59□□□□□ -1.19
YBX3-210ENST00000540975 A0A1W2PPL8 197 aa7.58□□□□□ -1.2
YBX3-210ENST00000540975 GRPP07492 148 aa7.58□□□□□ -1.2
YBX3-210ENST00000540975 ARFIP2P53365 341 aa7.58□□□□□ -1.2
YBX3-210ENST00000540975 IQCB1Q15051 598 aa7.58□□□□□ -1.2
YBX3-210ENST00000540975 LLGL1Q15334 1064 aa7.58□□□□□ -1.2
YBX3-210ENST00000540975 NBPF8Q3BBV2 869 aa7.58□□□□□ -1.2
YBX3-210ENST00000540975 TMEM108Q6UXF1 575 aa7.58□□□□□ -1.2
YBX3-210ENST00000540975 MAEAQ7L5Y9 396 aa7.58□□□□□ -1.2
YBX3-210ENST00000540975 FAM109AQ8N4B1 249 aa7.58□□□□□ -1.2
YBX3-210ENST00000540975 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.58□□□□□ -1.2
YBX3-210ENST00000540975 NELL2Q99435 816 aa7.58□□□□□ -1.2
YBX3-210ENST00000540975 TPSD1Q9BZJ3 242 aa7.58□□□□□ -1.2
YBX3-210ENST00000540975 TTYH3Q9C0H2 523 aa7.58□□□□□ -1.2
YBX3-210ENST00000540975 L1RE1Q9UN81 338 aa7.58□□□□□ -1.2
YBX3-210ENST00000540975 WDR27A2RRH5 827 aa7.57□□□□□ -1.2
YBX3-210ENST00000540975 GOLGA6CA6NDK9 693 aa7.57□□□□□ -1.2
YBX3-210ENST00000540975 GOLGA6BA6NDN3 693 aa7.57□□□□□ -1.2
YBX3-210ENST00000540975 VWC2LB2RUY7 222 aa7.57□□□□□ -1.2
YBX3-210ENST00000540975 ADM5C9JUS6 153 aa7.57□□□□□ -1.2
YBX3-210ENST00000540975 PHGDHO43175 533 aaKnown RBP7.57□□□□□ -1.2
YBX3-210ENST00000540975 CHRM2P08172 466 aa7.57□□□□□ -1.2
YBX3-210ENST00000540975 GOLGA6DP0CG33 693 aa7.57□□□□□ -1.2
YBX3-210ENST00000540975 KITP10721 976 aa7.57□□□□□ -1.2
YBX3-210ENST00000540975 NPR1P16066 1061 aa7.57□□□□□ -1.2
YBX3-210ENST00000540975 ZNF134P52741 427 aa7.57□□□□□ -1.2
YBX3-210ENST00000540975 UCP3P55916 312 aa7.57□□□□□ -1.2
YBX3-210ENST00000540975 VPS53Q5VIR6 699 aa7.57□□□□□ -1.2
YBX3-210ENST00000540975 C14orf80Q86SX3 495 aa7.57□□□□□ -1.2
YBX3-210ENST00000540975 DNAJC10Q8IXB1 793 aa7.57□□□□□ -1.2
YBX3-210ENST00000540975 KBTBD7Q8WVZ9 684 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms