RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 PIK3CAP42336 1068 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 ALDH1A3P47895 512 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 LHX1P48742 406 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 PPP3CAQ08209 521 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 ZNF699Q32M78 642 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 ZACNQ401N2 412 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 PABPC1LQ4VXU2 614 aaKnown RBP9.89□□□□□ -0.83
SNHG1-215ENST00000540904 IQCEQ6IPM2 695 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 TTI2Q6NXR4 508 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 DPH6Q7L8W6 267 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 LIMS2Q7Z4I7 341 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 OSTM1Q86WC4 334 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 DCP1BQ8IZD4 617 aaKnown RBP9.89□□□□□ -0.83
SNHG1-215ENST00000540904 ELMOD1Q8N336 334 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 TRIML1Q8N9V2 468 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 SPATA18Q8TC71 538 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 KBTBD7Q8WVZ9 684 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 SEPT5Q99719 369 aaPredicted RBP9.89□□□□□ -0.83
SNHG1-215ENST00000540904 ACBD6Q9BR61 282 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 CORO1BQ9BR76 489 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 MKNK1Q9BUB5 465 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 NUP62CLQ9H1M0 184 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 SNX25Q9H3E2 840 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 ABI2Q9NYB9 513 aaPredicted RBP9.89□□□□□ -0.83
SNHG1-215ENST00000540904 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.89□□□□□ -0.83
SNHG1-215ENST00000540904 DNMT3BQ9UBC3 853 aaKnown RBP9.89□□□□□ -0.83
SNHG1-215ENST00000540904 LIMD1Q9UGP4 676 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 SCN1AP35498 2009 aa9.89□□□□□ -0.83
SNHG1-215ENST00000540904 BICDL2A1A5D9 508 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 PI4K2BG5E9Z4 385 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 GABRDO14764 452 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 SLC16A3O15427 465 aaKnown RBP9.88□□□□□ -0.83
SNHG1-215ENST00000540904 DCXO43602 365 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 ATP2C2O75185 946 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 STAU1O95793 577 aaKnown RBP9.88□□□□□ -0.83
SNHG1-215ENST00000540904 HLA-DRAP01903 254 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 ASGR2P07307 311 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 PTPN2P17706 415 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 WARSP23381 471 aaKnown RBP9.88□□□□□ -0.83
SNHG1-215ENST00000540904 LMO2P25791 158 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 GNL1P36915 607 aaPredicted RBP9.88□□□□□ -0.83
SNHG1-215ENST00000540904 TUFMP49411 452 aaKnown RBP9.88□□□□□ -0.83
SNHG1-215ENST00000540904 EPHB3P54753 998 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 STX17P56962 302 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 PSMC1P62191 440 aaKnown RBP9.88□□□□□ -0.83
SNHG1-215ENST00000540904 ENPEPQ07075 957 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 SMARCB1Q12824 385 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 PAK1Q13153 545 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 CCDC142Q17RM4 750 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 SGSM1Q2NKQ1 1148 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 MGAT5BQ3V5L5 792 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 DCAF17Q5H9S7 520 aaPredicted RBP9.88□□□□□ -0.83
SNHG1-215ENST00000540904 ZNF667Q5HYK9 610 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 INTS6LQ5JSJ4 861 aaKnown RBP9.88□□□□□ -0.83
SNHG1-215ENST00000540904 TCERG1LQ5VWI1 586 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 SCARA5Q6ZMJ2 495 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 ZC3H3Q8IXZ2 948 aaKnown RBP9.88□□□□□ -0.83
SNHG1-215ENST00000540904 ZDHHC14Q8IZN3 488 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 PLCD3Q8N3E9 789 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 OR6B3Q8NGW1 331 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 ITFG1Q8TB96 612 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 SPPL2BQ8TCT7 592 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 C2orf15Q8WU43 125 aaKnown RBP9.88□□□□□ -0.83
SNHG1-215ENST00000540904 ING5Q8WYH8 240 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 ZNF512Q96ME7 567 aaPredicted RBP9.88□□□□□ -0.83
SNHG1-215ENST00000540904 MYADMQ96S97 322 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 DUSP9Q99956 384 aaKnown RBP9.88□□□□□ -0.83
SNHG1-215ENST00000540904 MRPL45Q9BRJ2 306 aaKnown RBP9.88□□□□□ -0.83
SNHG1-215ENST00000540904 PI4K2AQ9BTU6 479 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 IMPG2Q9BZV3 1241 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 EPHX3Q9H6B9 360 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 SMYD3Q9H7B4 428 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 TMEM8AQ9HCN3 771 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 TMLHEQ9NVH6 421 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 CEP72Q9P209 647 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 ARMCX3Q9UH62 379 aaPredicted RBP9.88□□□□□ -0.83
SNHG1-215ENST00000540904 GTF3C4Q9UKN8 822 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 CDH9Q9ULB4 789 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 MRPS23Q9Y3D9 190 aaKnown RBP9.88□□□□□ -0.83
SNHG1-215ENST00000540904 PCDHB5Q9Y5E4 795 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 C5orf42Q9H799 3197 aa9.88□□□□□ -0.83
SNHG1-215ENST00000540904 TTC28Q96AY4 2481 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 MYBPHLA2RUH7 354 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 STX10O60499 249 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 TACC1O75410 805 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 P4HA1P13674 534 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 ALADP13716 330 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 GTF2H1P32780 548 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 RAP1GAPP47736 663 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 CDH8P55286 799 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 PLD1Q13393 1074 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 NFE2Q16621 373 aaPredicted RBP9.87□□□□□ -0.83
SNHG1-215ENST00000540904 SLC5A9Q2M3M2 681 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 KRT39Q6A163 491 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 SPOPLQ6IQ16 392 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 PDZD4Q76G19 769 aaPredicted RBP9.87□□□□□ -0.83
SNHG1-215ENST00000540904 HS6ST3Q8IZP7 471 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 ST13P5Q8NFI4 369 aaPredicted RBP9.87□□□□□ -0.83
SNHG1-215ENST00000540904 FAM200AQ8TCP9 573 aa9.87□□□□□ -0.83
SNHG1-215ENST00000540904 GPT2Q8TD30 523 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms