RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 CHRNB1P11230 501 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 NCLP19338 710 aaKnown RBP5.14□□□□□ -1.59
SNHG1-214ENST00000540865 GSTT1P30711 240 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 FNTBP49356 437 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 ADCY7P51828 1080 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 SETQ01105 290 aaPredicted RBP5.14□□□□□ -1.59
SNHG1-214ENST00000540865 SATB1Q01826 763 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 PRKCEQ02156 737 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 SRSF5Q13243 272 aaKnown RBP5.14□□□□□ -1.59
SNHG1-214ENST00000540865 DRP2Q13474 957 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 SF3A2Q15428 464 aaKnown RBP5.14□□□□□ -1.59
SNHG1-214ENST00000540865 UVSSAQ2YD98 709 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 MEI1Q5TIA1 1274 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 FUT10Q6P4F1 479 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 CEP68Q76N32 757 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 RTL10Q7L3V2 364 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 HEATR3Q7Z4Q2 680 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 WDR5BQ86VZ2 330 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 TMTC2Q8N394 836 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 UBASH3BQ8TF42 649 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 FAM3CQ92520 227 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 GATA6Q92908 595 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 ELSPBP1Q96BH3 223 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 PGBD1Q96JS3 809 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 ZNF577Q9BSK1 485 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 GPR62Q9BZJ7 368 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 PLA2G2FQ9BZM2 168 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 GOLGA2P5Q9HBQ8 144 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 AGPAT5Q9NUQ2 364 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 SUCLA2Q9P2R7 463 aaPredicted RBP5.14□□□□□ -1.59
SNHG1-214ENST00000540865 VTI1BQ9UEU0 232 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 GPN3Q9UHW5 284 aaPredicted RBP5.14□□□□□ -1.59
SNHG1-214ENST00000540865 NDRG2Q9UN36 371 aaKnown RBP5.14□□□□□ -1.59
SNHG1-214ENST00000540865 PCDHGA5Q9Y5G8 931 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 AKAP13Q12802 2813 aa5.14□□□□□ -1.59
SNHG1-214ENST00000540865 DOCK5Q9H7D0 1870 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 NAV2Q8IVL1 2488 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 DOCK8Q8NF50 2099 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 hCG_1642624A0A1W2PR95 340 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 ARL5CA6NH57 179 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 E7EWF7 191 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 hCG_1984214I3L0E3 225 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 GIPC1O14908 333 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 CCL16O15467 120 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 B3GALT4O96024 378 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 ITGA4P13612 1032 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 RPL17P18621 184 aaKnown RBP5.13□□□□□ -1.59
SNHG1-214ENST00000540865 HOXA11P31270 313 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-214ENST00000540865 RAP1GAPP47736 663 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 ARL4DP49703 201 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 NOVA1P51513 510 aaKnown RBP5.13□□□□□ -1.59
SNHG1-214ENST00000540865 NAPAP54920 295 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 MLLT6P55198 1093 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-214ENST00000540865 ANTXR2P58335 489 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 FGD1P98174 961 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 ZNF252P-AS1Q0IIN9 211 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 LRRC32Q14392 662 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 PABPC1LQ4VXU2 614 aaKnown RBP5.13□□□□□ -1.59
SNHG1-214ENST00000540865 XKR3Q5GH77 459 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 UBXN11Q5T124 520 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 WWC2Q6AWC2 1192 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 TANGO2Q6ICL3 276 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 PDXDC1Q6P996 788 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 C1orf228Q6PIY5 440 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 NFXL1Q6ZNB6 911 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 TMTC3Q6ZXV5 915 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 CACNA2D4Q7Z3S7 1137 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 RHPN2Q8IUC4 686 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 MAP4K3Q8IVH8 894 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 MB21D2Q8IYB1 491 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-214ENST00000540865 AGGF1Q8N302 714 aaeCLIP5.13□□□□□ -1.59
SNHG1-214ENST00000540865 ZNF713Q8N859 430 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-214ENST00000540865 STK35Q8TDR2 534 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 CRYGNQ8WXF5 182 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 ZCCHC14Q8WYQ9 949 aaKnown RBP5.13□□□□□ -1.59
SNHG1-214ENST00000540865 CCDC51Q96ER9 411 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 MCRS1Q96EZ8 462 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 MSANTD3Q96H12 275 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 B3GALT6Q96L58 329 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 FRMD6Q96NE9 622 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 CEP89Q96ST8 783 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 CLSTN3Q9BQT9 956 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 JPH2Q9BR39 696 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-214ENST00000540865 TRIM56Q9BRZ2 755 aaKnown RBP5.13□□□□□ -1.59
SNHG1-214ENST00000540865 TRMT61BQ9BVS5 477 aaKnown RBP5.13□□□□□ -1.59
SNHG1-214ENST00000540865 ARRDC1-AS1Q9H2J1 176 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 BRD9Q9H8M2 597 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 IFT122Q9HBG6 1241 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 OSGEPQ9NPF4 335 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 DISC1Q9NRI5 854 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 VPS45Q9NRW7 570 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 DNMT3BQ9UBC3 853 aaKnown RBP5.13□□□□□ -1.59
SNHG1-214ENST00000540865 ADAM28Q9UKQ2 775 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 GIT1Q9Y2X7 761 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 MRPS23Q9Y3D9 190 aaKnown RBP5.13□□□□□ -1.59
SNHG1-214ENST00000540865 SAMM50Q9Y512 469 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 PIAS3Q9Y6X2 628 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 LAMA4Q16363 1823 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 MYH6P13533 1939 aa5.13□□□□□ -1.59
SNHG1-214ENST00000540865 CCDC163A0A0D9SF12 145 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms