RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 MMP8P22894 467 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 SLC8A1P32418 973 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 ABL2P42684 1182 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 TUBP50607 506 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 XRCC4Q13426 336 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 TRPC3Q13507 836 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 SLMAPQ14BN4 828 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 ATF7IP2Q5U623 682 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 GKAP1Q5VSY0 366 aaPredicted RBP11.98□□□□□ -0.49
LGR5-203ENST00000540815 CCDC63Q8NA47 563 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 SHCBP1Q8NEM2 672 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 GRK7Q8WTQ7 553 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 RNF25Q96BH1 459 aaPredicted RBP11.98□□□□□ -0.49
LGR5-203ENST00000540815 ZNF668Q96K58 619 aaPredicted RBP11.98□□□□□ -0.49
LGR5-203ENST00000540815 DCLK3Q9C098 648 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 MLXIPLQ9NP71 852 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 PDGFCQ9NRA1 345 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 ETAA1Q9NY74 926 aa11.98□□□□□ -0.49
LGR5-203ENST00000540815 ATXN2Q99700 1313 aaKnown RBP11.98□□□□□ -0.49
LGR5-203ENST00000540815 TLR3O15455 904 aaKnown RBP11.97□□□□□ -0.49
LGR5-203ENST00000540815 B4GALT4O60513 344 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 CALB1P05937 261 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 PYGLP06737 847 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 TAS2R40P59535 323 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 KRT17Q04695 432 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 KLF1Q13351 362 aaPredicted RBP11.97□□□□□ -0.49
LGR5-203ENST00000540815 PTK6Q13882 451 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 TTLL4Q14679 1199 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 DAB2IPQ5VWQ8 1189 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 C9orf131Q5VYM1 1079 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 USP50Q70EL3 339 aaPredicted RBP11.97□□□□□ -0.49
LGR5-203ENST00000540815 TLCD1Q96CP7 247 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 HERPUD2Q9BSE4 406 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 ACTR5Q9H9F9 607 aaPredicted RBP11.97□□□□□ -0.49
LGR5-203ENST00000540815 CHST7Q9NS84 486 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 HOMER3Q9NSC5 361 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 CISHQ9NSE2 258 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 IP6K2Q9UHH9 426 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 ASB14A6NK59 587 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 PDHA1P08559 390 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 LINGO3P0C6S8 592 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 PPP2R2AP63151 447 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 MBTD1Q05BQ5 628 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 ADCY2Q08462 1091 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 CALCOCO2Q13137 446 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 LLGL1Q15334 1064 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 ZNF568Q3ZCX4 644 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 EXD1Q8NHP7 514 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 ZC3H15Q8WU90 426 aaKnown RBP11.97□□□□□ -0.49
LGR5-203ENST00000540815 UPF1Q92900 1129 aaKnown RBP eCLIP11.97□□□□□ -0.49
LGR5-203ENST00000540815 NLRP4Q96MN2 994 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 SELENOSQ9BQE4 189 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 NFKBIZQ9BYH8 718 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 ZNF518BQ9C0D4 1074 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 PLXNA1Q9UIW2 1896 aa11.97□□□□□ -0.49
LGR5-203ENST00000540815 O00370 1275 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 TNNC2P02585 160 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 TMEM191BP0C7N4 346 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 RARGP13631 454 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 CDH5P33151 784 aaPredicted RBP11.96□□□□□ -0.49
LGR5-203ENST00000540815 TFAMQ00059 246 aaKnown RBP11.96□□□□□ -0.49
LGR5-203ENST00000540815 ZNF699Q32M78 642 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 EFCAB12Q6NXP0 572 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 CROCCP2Q86T23 111 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 ANKRD36BP1Q96IX9 119 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 TMEM109Q9BVC6 243 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 PCDHGC3Q9UN70 934 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 TNFSF13BQ9Y275 285 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 EVPLQ92817 2033 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 TCRBV5S1A1TA0A578 114 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 TMEM191CA6NGB0 347 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 INO80B-WBP1J3KQ70 363 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 RALAP11233 206 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 CD58P19256 250 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 ITIH2P19823 946 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 ASPAP45381 313 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 YWHAEP62258 255 aaKnown RBP11.96□□□□□ -0.49
LGR5-203ENST00000540815 ZNF484Q5JVG2 852 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 WDR78Q5VTH9 848 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 ARMC9Q7Z3E5 817 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 CCDC50Q8IVM0 306 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 TMEM130Q8N3G9 435 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 CEP120Q8N960 986 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 ATG4AQ8WYN0 398 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 SH3GL3Q99963 347 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 INO80BQ9C086 356 aaPredicted RBP11.96□□□□□ -0.49
LGR5-203ENST00000540815 XYLT2Q9H1B5 865 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 SEMA4AQ9H3S1 761 aa11.96□□□□□ -0.49
LGR5-203ENST00000540815 KIF3CO14782 793 aa11.96□□□□□ -0.5
LGR5-203ENST00000540815 B4GALT5O43286 388 aa11.96□□□□□ -0.5
LGR5-203ENST00000540815 SMNDC1O75940 238 aaKnown RBP eCLIP11.96□□□□□ -0.5
LGR5-203ENST00000540815 IL18RAPO95256 599 aa11.96□□□□□ -0.5
LGR5-203ENST00000540815 C22orf31O95567 290 aa11.96□□□□□ -0.5
LGR5-203ENST00000540815 DRD4P21917 467 aa11.96□□□□□ -0.5
LGR5-203ENST00000540815 CLCN3P51790 818 aa11.96□□□□□ -0.5
LGR5-203ENST00000540815 SLC29A2Q14542 456 aa11.96□□□□□ -0.5
LGR5-203ENST00000540815 CCDC38Q502W7 563 aa11.96□□□□□ -0.5
LGR5-203ENST00000540815 GJC2Q5T442 439 aaPredicted RBP11.96□□□□□ -0.5
LGR5-203ENST00000540815 EEF1DP3Q658K8 133 aa11.96□□□□□ -0.5
LGR5-203ENST00000540815 THNSL1Q8IYQ7 743 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms