RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 RASSF8Q8NHQ8 419 aa13.5□□□□□ -0.25
COPS7A-211ENST00000540408 SPPL2BQ8TCT7 592 aa13.5□□□□□ -0.25
COPS7A-211ENST00000540408 LPIN3Q9BQK8 851 aa13.5□□□□□ -0.25
COPS7A-211ENST00000540408 ZCWPW1Q9H0M4 648 aa13.5□□□□□ -0.25
COPS7A-211ENST00000540408 ARRDC1-AS1Q9H2J1 176 aa13.5□□□□□ -0.25
COPS7A-211ENST00000540408 GKN1Q9NS71 199 aa13.5□□□□□ -0.25
COPS7A-211ENST00000540408 CPSF3Q9UKF6 684 aaKnown RBP13.5□□□□□ -0.25
COPS7A-211ENST00000540408 PDCD11Q14690 1871 aaKnown RBP13.5□□□□□ -0.25
COPS7A-211ENST00000540408 MYH11P35749 1972 aa13.49□□□□□ -0.25
COPS7A-211ENST00000540408 ANO9A1A5B4 782 aa13.49□□□□□ -0.25
COPS7A-211ENST00000540408 FAM189A1O60320 539 aa13.49□□□□□ -0.25
COPS7A-211ENST00000540408 GDF9O60383 454 aa13.49□□□□□ -0.25
COPS7A-211ENST00000540408 TBCAO75347 108 aaKnown RBP13.49□□□□□ -0.25
COPS7A-211ENST00000540408 RPP40O75818 363 aaKnown RBP13.49□□□□□ -0.25
COPS7A-211ENST00000540408 PRAMEF12O95522 483 aa13.49□□□□□ -0.25
COPS7A-211ENST00000540408 ZNF806P0C7X5 589 aa13.49□□□□□ -0.25
COPS7A-211ENST00000540408 TAF6P49848 677 aa13.49□□□□□ -0.25
COPS7A-211ENST00000540408 RUNX3Q13761 415 aa13.49□□□□□ -0.25
COPS7A-211ENST00000540408 ADALQ6DHV7 355 aa13.49□□□□□ -0.25
COPS7A-211ENST00000540408 OR10T2Q8NGX3 314 aa13.49□□□□□ -0.25
COPS7A-211ENST00000540408 GIPC2Q8TF65 315 aa13.49□□□□□ -0.25
COPS7A-211ENST00000540408 GAB3Q8WWW8 586 aa13.49□□□□□ -0.25
COPS7A-211ENST00000540408 PYM1Q9BRP8 204 aaKnown RBP13.49□□□□□ -0.25
COPS7A-211ENST00000540408 SLC46A2Q9BY10 475 aa13.49□□□□□ -0.25
COPS7A-211ENST00000540408 DPP3Q9NY33 737 aa13.49□□□□□ -0.25
COPS7A-211ENST00000540408 C2CD2Q9Y426 696 aa13.49□□□□□ -0.25
COPS7A-211ENST00000540408 SOBPA7XYQ1 873 aa13.48□□□□□ -0.25
COPS7A-211ENST00000540408 EXTL3O43909 919 aa13.48□□□□□ -0.25
COPS7A-211ENST00000540408 NFICP08651 508 aa13.48□□□□□ -0.25
COPS7A-211ENST00000540408 ATF6P18850 670 aa13.48□□□□□ -0.25
COPS7A-211ENST00000540408 ACOT2P49753 483 aa13.48□□□□□ -0.25
COPS7A-211ENST00000540408 ZNF131P52739 623 aa13.48□□□□□ -0.25
COPS7A-211ENST00000540408 LIMK1P53667 647 aa13.48□□□□□ -0.25
COPS7A-211ENST00000540408 GTF2BQ00403 316 aa13.48□□□□□ -0.25
COPS7A-211ENST00000540408 TSPY1Q01534 308 aa13.48□□□□□ -0.25
COPS7A-211ENST00000540408 POU5F1Q01860 360 aaKnown RBP13.48□□□□□ -0.25
COPS7A-211ENST00000540408 SV2CQ496J9 727 aa13.48□□□□□ -0.25
COPS7A-211ENST00000540408 TMEM196Q5HYL7 178 aa13.48□□□□□ -0.25
COPS7A-211ENST00000540408 WDR44Q5JSH3 913 aa13.48□□□□□ -0.25
COPS7A-211ENST00000540408 CAMKK1Q8N5S9 505 aa13.48□□□□□ -0.25
COPS7A-211ENST00000540408 MAB21L3Q8N8X9 362 aa13.48□□□□□ -0.25
COPS7A-211ENST00000540408 MRPS31Q92665 395 aaKnown RBP13.48□□□□□ -0.25
COPS7A-211ENST00000540408 KIF9Q9HAQ2 790 aa13.48□□□□□ -0.25
COPS7A-211ENST00000540408 TDP1Q9NUW8 608 aa13.48□□□□□ -0.25
COPS7A-211ENST00000540408 ABI2Q9NYB9 513 aaPredicted RBP13.48□□□□□ -0.25
COPS7A-211ENST00000540408 PCDHB5Q9Y5E4 795 aa13.48□□□□□ -0.25
COPS7A-211ENST00000540408 KPNA7A9QM74 516 aa13.47□□□□□ -0.25
COPS7A-211ENST00000540408 TULP1O00294 542 aaPredicted RBP13.47□□□□□ -0.25
COPS7A-211ENST00000540408 TRDMT1O14717 391 aaKnown RBP13.47□□□□□ -0.25
COPS7A-211ENST00000540408 AKAP3O75969 853 aa13.47□□□□□ -0.25
COPS7A-211ENST00000540408 CSH1P0DML2 217 aa13.47□□□□□ -0.25
COPS7A-211ENST00000540408 CSH2P0DML3 217 aa13.47□□□□□ -0.25
COPS7A-211ENST00000540408 HAPLN1P10915 354 aaPredicted RBP13.47□□□□□ -0.25
COPS7A-211ENST00000540408 DRD1P21728 446 aa13.47□□□□□ -0.25
COPS7A-211ENST00000540408 POSTNQ15063 836 aa13.47□□□□□ -0.25
COPS7A-211ENST00000540408 NFE2Q16621 373 aaPredicted RBP13.47□□□□□ -0.25
COPS7A-211ENST00000540408 ERICH6BQ5W0A0 696 aa13.47□□□□□ -0.25
COPS7A-211ENST00000540408 NT5DC4Q86YG4 428 aa13.47□□□□□ -0.25
COPS7A-211ENST00000540408 KRI1Q8N9T8 703 aaKnown RBP13.47□□□□□ -0.25
COPS7A-211ENST00000540408 FAM83CQ9BQN1 747 aa13.47□□□□□ -0.25
COPS7A-211ENST00000540408 SMG9Q9H0W8 520 aaKnown RBP13.47□□□□□ -0.25
COPS7A-211ENST00000540408 EBF3Q9H4W6 596 aa13.47□□□□□ -0.25
COPS7A-211ENST00000540408 IL21Q9HBE4 155 aa13.47□□□□□ -0.25
COPS7A-211ENST00000540408 C2orf42Q9NWW7 574 aa13.47□□□□□ -0.25
COPS7A-211ENST00000540408 UXTQ9UBK9 157 aaPredicted RBP13.47□□□□□ -0.25
COPS7A-211ENST00000540408 ANGPTL2Q9UKU9 493 aa13.47□□□□□ -0.25
COPS7A-211ENST00000540408 AGO2Q9UKV8 859 aaKnown RBP13.47□□□□□ -0.25
COPS7A-211ENST00000540408 MAGED2Q9UNF1 606 aaPredicted RBP13.47□□□□□ -0.25
COPS7A-211ENST00000540408 PCDHGA5Q9Y5G8 931 aa13.47□□□□□ -0.25
COPS7A-211ENST00000540408 RALGAPA1Q6GYQ0 2036 aa13.46□□□□□ -0.25
COPS7A-211ENST00000540408 PRPF40AO75400 957 aaKnown RBP13.46□□□□□ -0.25
COPS7A-211ENST00000540408 EPN2O95208 641 aa13.46□□□□□ -0.25
COPS7A-211ENST00000540408 IL18RAPO95256 599 aa13.46□□□□□ -0.25
COPS7A-211ENST00000540408 BMP15O95972 392 aa13.46□□□□□ -0.25
COPS7A-211ENST00000540408 NMT1P30419 496 aaKnown RBP13.46□□□□□ -0.25
COPS7A-211ENST00000540408 LONP1P36776 959 aaKnown RBP13.46□□□□□ -0.25
COPS7A-211ENST00000540408 PNPLA4P41247 253 aa13.46□□□□□ -0.25
COPS7A-211ENST00000540408 PXNP49023 591 aaPredicted RBP13.46□□□□□ -0.25
COPS7A-211ENST00000540408 CDR1P51861 262 aa13.46□□□□□ -0.25
COPS7A-211ENST00000540408 NLRP12P59046 1061 aa13.46□□□□□ -0.25
COPS7A-211ENST00000540408 MCM6Q14566 821 aa13.46□□□□□ -0.25
COPS7A-211ENST00000540408 PDGFRLQ15198 375 aa13.46□□□□□ -0.25
COPS7A-211ENST00000540408 SF3A2Q15428 464 aaKnown RBP13.46□□□□□ -0.25
COPS7A-211ENST00000540408 FBXO43Q4G163 708 aa13.46□□□□□ -0.25
COPS7A-211ENST00000540408 WSCD1Q658N2 575 aa13.46□□□□□ -0.25
COPS7A-211ENST00000540408 SLC39A4Q6P5W5 647 aa13.46□□□□□ -0.25
COPS7A-211ENST00000540408 KBTBD6Q86V97 674 aa13.46□□□□□ -0.25
COPS7A-211ENST00000540408 CCDC26Q8TAB7 109 aa13.46□□□□□ -0.25
COPS7A-211ENST00000540408 POMGNT1Q8WZA1 660 aa13.46□□□□□ -0.25
COPS7A-211ENST00000540408 USP13Q92995 863 aaPredicted RBP13.46□□□□□ -0.25
COPS7A-211ENST00000540408 ZNF560Q96MR9 790 aa13.46□□□□□ -0.25
COPS7A-211ENST00000540408 CCSER1Q9C0I3 900 aa13.46□□□□□ -0.25
COPS7A-211ENST00000540408 NUP210Q8TEM1 1887 aaPredicted RBP13.46□□□□□ -0.26
COPS7A-211ENST00000540408 CACNA1BQ00975 2339 aa13.45□□□□□ -0.26
COPS7A-211ENST00000540408 ANKRD63C9JTQ0 380 aa13.45□□□□□ -0.26
COPS7A-211ENST00000540408 RNF40O75150 1001 aa13.45□□□□□ -0.26
COPS7A-211ENST00000540408 RHOBTB1O94844 696 aa13.45□□□□□ -0.26
COPS7A-211ENST00000540408 F11P03951 625 aa13.45□□□□□ -0.26
COPS7A-211ENST00000540408 RAP1GAPP47736 663 aa13.45□□□□□ -0.26
COPS7A-211ENST00000540408 RPL10AP62906 217 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms