RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 FAM49BQ9NUQ9 324 aa7.34□□□□□ -1.23
CDH19-203ENST00000540086 TMEM161AQ9NX61 479 aa7.34□□□□□ -1.23
CDH19-203ENST00000540086 CTTNBP2NLQ9P2B4 639 aa7.34□□□□□ -1.23
CDH19-203ENST00000540086 COG5Q9UP83 839 aa7.34□□□□□ -1.23
CDH19-203ENST00000540086 ANK1P16157 1881 aa7.34□□□□□ -1.24
CDH19-203ENST00000540086 A0A0A6YYK5 440 aaPredicted RBP7.33□□□□□ -1.24
CDH19-203ENST00000540086 TRIM43BA6NCK2 446 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 A8MXQ7 604 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 O00370 1275 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 INPPL1O15357 1258 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 MED7O43513 233 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 NCK2O43639 380 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 B3GAT3O94766 335 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 LSM8O95777 96 aaKnown RBP7.33□□□□□ -1.24
CDH19-203ENST00000540086 FTCDO95954 541 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 ATP1A1P05023 1023 aaKnown RBP7.33□□□□□ -1.24
CDH19-203ENST00000540086 LMO2P25791 158 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 ITGB8P26012 769 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 RPL9P32969 192 aaKnown RBP7.33□□□□□ -1.24
CDH19-203ENST00000540086 GNL1P36915 607 aaPredicted RBP7.33□□□□□ -1.24
CDH19-203ENST00000540086 CDR1P51861 262 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 GPC5P78333 572 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 SGO2Q562F6 1265 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 DSTYKQ6XUX3 929 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 MON1BQ7L1V2 547 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 LIMS2Q7Z4I7 341 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 MCOLN2Q8IZK6 566 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 TTC39CQ8N584 583 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 WDTC1Q8N5D0 677 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 TOP6BLQ8N6T0 577 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 TPCN2Q8NHX9 752 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 URGCPQ8TCY9 931 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 TRIM43Q96BQ3 446 aaPredicted RBP7.33□□□□□ -1.24
CDH19-203ENST00000540086 FAM124BQ9H5Z6 455 aaPredicted RBP7.33□□□□□ -1.24
CDH19-203ENST00000540086 TBC1D13Q9NVG8 400 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 CNOT8Q9UFF9 292 aaKnown RBP7.33□□□□□ -1.24
CDH19-203ENST00000540086 CYTH4Q9UIA0 394 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 GTF3C4Q9UKN8 822 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 LRFN2Q9ULH4 789 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 PCDHGC3Q9UN70 934 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.33□□□□□ -1.24
CDH19-203ENST00000540086 PCDHB7Q9Y5E2 793 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 PCDHGC5Q9Y5F6 944 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 TIMM13Q9Y5L4 95 aaPredicted RBP7.33□□□□□ -1.24
CDH19-203ENST00000540086 M0QYV0 167 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 DDHD2O94830 711 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 MICAL2O94851 1124 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 KIF4AO95239 1232 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 PARNO95453 639 aaKnown RBP7.33□□□□□ -1.24
CDH19-203ENST00000540086 CYP1A2P05177 515 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 ITGB1P05556 798 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 VDRP11473 427 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 EN2P19622 333 aaPredicted RBP7.33□□□□□ -1.24
CDH19-203ENST00000540086 RRM1P23921 792 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 ACAT1P24752 427 aaKnown RBP7.33□□□□□ -1.24
CDH19-203ENST00000540086 BRCC3P46736 316 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 DNA2P51530 1060 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 RNASELQ05823 741 aaKnown RBP7.33□□□□□ -1.24
CDH19-203ENST00000540086 CCDC142Q17RM4 750 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 GOLGA7BQ2TAP0 167 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 TIGD5Q53EQ6 642 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 SMYD5Q6GMV2 418 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 CD300LGQ6UXG3 332 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 UNC93AQ86WB7 457 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 ABI1Q8IZP0 508 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 TMEM35BQ8NCS4 154 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 UBA3Q8TBC4 463 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 VWCEQ96DN2 955 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 DDX27Q96GQ7 796 aaKnown RBP7.33□□□□□ -1.24
CDH19-203ENST00000540086 NUP85Q9BW27 656 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 ELAC1Q9H777 363 aaKnown RBP7.33□□□□□ -1.24
CDH19-203ENST00000540086 ADAM22Q9P0K1 906 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 HCSTQ9UBK5 93 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 STXBP5LQ9Y2K9 1186 aa7.33□□□□□ -1.24
CDH19-203ENST00000540086 PRG3Q9Y2Y8 225 aaPredicted RBP7.33□□□□□ -1.24
CDH19-203ENST00000540086 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.33□□□□□ -1.24
CDH19-203ENST00000540086 RALGAPA2Q2PPJ7 1873 aa7.32□□□□□ -1.24
CDH19-203ENST00000540086 KIAA0100Q14667 2235 aaKnown RBP7.32□□□□□ -1.24
CDH19-203ENST00000540086 TMEM110-MUSTN1A8MSY1 372 aa7.32□□□□□ -1.24
CDH19-203ENST00000540086 BUB1BO60566 1050 aaPredicted RBP7.32□□□□□ -1.24
CDH19-203ENST00000540086 GABBR2O75899 941 aa7.32□□□□□ -1.24
CDH19-203ENST00000540086 GJB6O95452 261 aa7.32□□□□□ -1.24
CDH19-203ENST00000540086 CHRM1P11229 460 aaPredicted RBP7.32□□□□□ -1.24
CDH19-203ENST00000540086 CCDC130P13994 396 aa7.32□□□□□ -1.24
CDH19-203ENST00000540086 CSF2RAP15509 400 aa7.32□□□□□ -1.24
CDH19-203ENST00000540086 MMP8P22894 467 aa7.32□□□□□ -1.24
CDH19-203ENST00000540086 WARSP23381 471 aaKnown RBP7.32□□□□□ -1.24
CDH19-203ENST00000540086 OR1G1P47890 313 aa7.32□□□□□ -1.24
CDH19-203ENST00000540086 AARSP49588 968 aaKnown RBP eCLIP7.32□□□□□ -1.24
CDH19-203ENST00000540086 PSMC1P62191 440 aaKnown RBP7.32□□□□□ -1.24
CDH19-203ENST00000540086 DSC1Q08554 894 aa7.32□□□□□ -1.24
CDH19-203ENST00000540086 PTP4A2Q12974 167 aa7.32□□□□□ -1.24
CDH19-203ENST00000540086 CNGA2Q16280 664 aa7.32□□□□□ -1.24
CDH19-203ENST00000540086 IFI16Q16666 785 aaKnown RBP7.32□□□□□ -1.24
CDH19-203ENST00000540086 PPP1R26Q5T8A7 1209 aaPredicted RBP7.32□□□□□ -1.24
CDH19-203ENST00000540086 LIN9Q5TKA1 542 aa7.32□□□□□ -1.24
CDH19-203ENST00000540086 CNKSR3Q6P9H4 555 aa7.32□□□□□ -1.24
CDH19-203ENST00000540086 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.32□□□□□ -1.24
CDH19-203ENST00000540086 DAAM2Q86T65 1068 aa7.32□□□□□ -1.24
CDH19-203ENST00000540086 PHF13Q86YI8 300 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms