RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 TAF4BQ92750 862 aa7.48□□□□□ -1.21
LPCAT3-209ENST00000540060 CASP10Q92851 521 aa7.48□□□□□ -1.21
LPCAT3-209ENST00000540060 SEMA4DQ92854 862 aa7.48□□□□□ -1.21
LPCAT3-209ENST00000540060 HLA-CQ95604 372 aa7.48□□□□□ -1.21
LPCAT3-209ENST00000540060 ELMO3Q96BJ8 720 aa7.48□□□□□ -1.21
LPCAT3-209ENST00000540060 MSLNLQ96KJ4 702 aa7.48□□□□□ -1.21
LPCAT3-209ENST00000540060 TMEM209Q96SK2 561 aa7.48□□□□□ -1.21
LPCAT3-209ENST00000540060 NOTCH4Q99466 2003 aa7.48□□□□□ -1.21
LPCAT3-209ENST00000540060 BPIFA3Q9BQP9 254 aa7.48□□□□□ -1.21
LPCAT3-209ENST00000540060 PI4K2AQ9BTU6 479 aa7.48□□□□□ -1.21
LPCAT3-209ENST00000540060 OXCT2Q9BYC2 517 aaPredicted RBP7.48□□□□□ -1.21
LPCAT3-209ENST00000540060 IMPG2Q9BZV3 1241 aa7.48□□□□□ -1.21
LPCAT3-209ENST00000540060 APOBEC3GQ9HC16 384 aaKnown RBP7.48□□□□□ -1.21
LPCAT3-209ENST00000540060 MAN1C1Q9NR34 630 aa7.48□□□□□ -1.21
LPCAT3-209ENST00000540060 SAMSN1Q9NSI8 373 aaKnown RBP7.48□□□□□ -1.21
LPCAT3-209ENST00000540060 DZANK1Q9NVP4 752 aa7.48□□□□□ -1.21
LPCAT3-209ENST00000540060 THEGQ9P2T0 379 aa7.48□□□□□ -1.21
LPCAT3-209ENST00000540060 POLIQ9UNA4 740 aa7.48□□□□□ -1.21
LPCAT3-209ENST00000540060 COG5Q9UP83 839 aa7.48□□□□□ -1.21
LPCAT3-209ENST00000540060 NFE2L3Q9Y4A8 694 aa7.48□□□□□ -1.21
LPCAT3-209ENST00000540060 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.48□□□□□ -1.21
LPCAT3-209ENST00000540060 ZNF638Q14966 1978 aaKnown RBP7.48□□□□□ -1.21
LPCAT3-209ENST00000540060 NUP210Q8TEM1 1887 aaPredicted RBP7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 KCNJ18B7U540 433 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 H3BQ06 376 aaPredicted RBP7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 P4HA2O15460 535 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 HCRTO43612 131 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 GFRA3O60609 400 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 CLSTN1O94985 981 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 PAPLNO95428 1278 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 VNN2O95498 520 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 AFPP02771 609 aaKnown RBP7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 OR4Q2P0C623 313 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 SPATA31D3P0C874 917 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 CPB1P15086 417 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 KCNA5P22460 613 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 WARSP23381 471 aaKnown RBP7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 EEF1GP26641 437 aaKnown RBP7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 RAP1GAPP47736 663 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 LHX1P48742 406 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 TFF2Q03403 129 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 KCNH2Q12809 1159 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 KCNJ12Q14500 433 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 MAN2A1Q16706 1144 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 HSP90AA4PQ58FG1 418 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 MIIPQ5JXC2 388 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 TPGS2Q68CL5 300 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 ANKRD54Q6NXT1 300 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 SCARA5Q6ZMJ2 495 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 SPATA31D4Q6ZUB0 917 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 METTL23Q86XA0 190 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 DHX40Q8IX18 779 aaKnown RBP7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 AOPEPQ8N6M6 819 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 SMRP1Q8NCR6 262 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 ZNF461Q8TAF7 563 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 HDAC7Q8WUI4 952 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 MMS19Q96T76 1030 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 PKMYT1Q99640 499 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 ACBD6Q9BR61 282 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 MRPL45Q9BRJ2 306 aaKnown RBP7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 BCO2Q9BYV7 579 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 NIF3L1Q9GZT8 377 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 NAT10Q9H0A0 1025 aaKnown RBP7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 ZCWPW1Q9H0M4 648 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 SDCBP2Q9H190 292 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 HSD3B7Q9H2F3 369 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 PLEKHA4Q9H4M7 779 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 SMYD3Q9H7B4 428 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 SFXN1Q9H9B4 322 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 RAB20Q9NX57 234 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 DDX43Q9NXZ2 648 aaKnown RBP7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 NXF1Q9UBU9 619 aaKnown RBP7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 NME7Q9Y5B8 376 aa7.47□□□□□ -1.21
LPCAT3-209ENST00000540060 HELZP42694 1942 aaKnown RBP7.46□□□□□ -1.21
LPCAT3-209ENST00000540060 MUC3AQ02505 3323 aa7.46□□□□□ -1.21
LPCAT3-209ENST00000540060 DOCK6Q96HP0 2047 aa7.46□□□□□ -1.22
LPCAT3-209ENST00000540060 NCOR1O75376 2440 aa7.46□□□□□ -1.22
LPCAT3-209ENST00000540060 MTMR11A4FU01 709 aa7.46□□□□□ -1.22
LPCAT3-209ENST00000540060 FAM163BP0C2L3 166 aa7.46□□□□□ -1.22
LPCAT3-209ENST00000540060 P4HA1P13674 534 aa7.46□□□□□ -1.22
LPCAT3-209ENST00000540060 ATF2P15336 505 aa7.46□□□□□ -1.22
LPCAT3-209ENST00000540060 ZNF18P17022 549 aa7.46□□□□□ -1.22
LPCAT3-209ENST00000540060 HOXB8P17481 243 aaPredicted RBP7.46□□□□□ -1.22
LPCAT3-209ENST00000540060 ACAT1P24752 427 aaKnown RBP7.46□□□□□ -1.22
LPCAT3-209ENST00000540060 LMO2P25791 158 aa7.46□□□□□ -1.22
LPCAT3-209ENST00000540060 PCSK1P29120 753 aa7.46□□□□□ -1.22
LPCAT3-209ENST00000540060 MTIF2P46199 727 aaKnown RBP7.46□□□□□ -1.22
LPCAT3-209ENST00000540060 CDH8P55286 799 aa7.46□□□□□ -1.22
LPCAT3-209ENST00000540060 ARPP19P56211 112 aa7.46□□□□□ -1.22
LPCAT3-209ENST00000540060 INCA1Q0VD86 236 aa7.46□□□□□ -1.22
LPCAT3-209ENST00000540060 GPR17Q13304 367 aa7.46□□□□□ -1.22
LPCAT3-209ENST00000540060 CLUL1Q15846 466 aa7.46□□□□□ -1.22
LPCAT3-209ENST00000540060 CCDC142Q17RM4 750 aa7.46□□□□□ -1.22
LPCAT3-209ENST00000540060 LEXMQ3ZCV2 418 aa7.46□□□□□ -1.22
LPCAT3-209ENST00000540060 SLC39A12Q504Y0 691 aa7.46□□□□□ -1.22
LPCAT3-209ENST00000540060 TCP11X2Q5H9J9 407 aa7.46□□□□□ -1.22
LPCAT3-209ENST00000540060 INTS6LQ5JSJ4 861 aaKnown RBP7.46□□□□□ -1.22
LPCAT3-209ENST00000540060 SYCE2Q6PIF2 218 aa7.46□□□□□ -1.22
LPCAT3-209ENST00000540060 ELMSAN1Q6PJG2 1045 aa7.46□□□□□ -1.22
LPCAT3-209ENST00000540060 RNF19BQ6ZMZ0 732 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms