RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 PLK5Q496M5 336 aa6.49□□□□□ -1.37
CPSF7-219ENST00000539952 ARHGAP15Q53QZ3 475 aa6.49□□□□□ -1.37
CPSF7-219ENST00000539952 XKR4Q5GH76 650 aa6.49□□□□□ -1.37
CPSF7-219ENST00000539952 ZNF280DQ6N043 979 aa6.49□□□□□ -1.37
CPSF7-219ENST00000539952 Q6ZS52 159 aa6.49□□□□□ -1.37
CPSF7-219ENST00000539952 RBM43Q6ZSC3 357 aaKnown RBP6.49□□□□□ -1.37
CPSF7-219ENST00000539952 C11orf74Q86VG3 221 aa6.49□□□□□ -1.37
CPSF7-219ENST00000539952 CCDC26Q8TAB7 109 aa6.49□□□□□ -1.37
CPSF7-219ENST00000539952 ANKRD7Q92527 254 aa6.49□□□□□ -1.37
CPSF7-219ENST00000539952 JAKMIP1Q96N16 626 aaKnown RBP6.49□□□□□ -1.37
CPSF7-219ENST00000539952 TNMDQ9H2S6 317 aa6.49□□□□□ -1.37
CPSF7-219ENST00000539952 GTSE1Q9NYZ3 720 aa6.49□□□□□ -1.37
CPSF7-219ENST00000539952 ZMYM5Q9UJ78 669 aa6.49□□□□□ -1.37
CPSF7-219ENST00000539952 WASF3Q9UPY6 502 aa6.49□□□□□ -1.37
CPSF7-219ENST00000539952 MTMR6Q9Y217 621 aa6.49□□□□□ -1.37
CPSF7-219ENST00000539952 TNFSF13BQ9Y275 285 aa6.49□□□□□ -1.37
CPSF7-219ENST00000539952 ASH1LQ9NR48 2969 aaKnown RBP6.48□□□□□ -1.37
CPSF7-219ENST00000539952 A0A1W2PRU2 124 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 BCLAF3A2AJT9 711 aaKnown RBP6.48□□□□□ -1.37
CPSF7-219ENST00000539952 I3L4J1 428 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 K7ERI5 159 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 PODXLO00592 558 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 TRDMT1O14717 391 aaKnown RBP6.48□□□□□ -1.37
CPSF7-219ENST00000539952 KHNYNO15037 678 aaKnown RBP6.48□□□□□ -1.37
CPSF7-219ENST00000539952 EXTL3O43909 919 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 USO1O60763 962 aaKnown RBP6.48□□□□□ -1.37
CPSF7-219ENST00000539952 OAZ2O95190 189 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 CPA1P15085 419 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 GJA1P17302 382 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 CYP11B2P19099 503 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 DRD1P21728 446 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 IGFBP6P24592 240 aaPredicted RBP6.48□□□□□ -1.37
CPSF7-219ENST00000539952 NAMPTP43490 491 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 GCGRP47871 477 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 ALDH1A3P47895 512 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 SOX9P48436 509 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 CREB5Q02930 508 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 RING1Q06587 406 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 ZNF252P-AS1Q0IIN9 211 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 GPR17Q13304 367 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 FBXO43Q4G163 708 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 USP39Q53GS9 565 aaKnown RBP6.48□□□□□ -1.37
CPSF7-219ENST00000539952 GLRA4Q5JXX5 417 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 SH3PXD2AQ5TCZ1 1133 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 ATF7IP2Q5U623 682 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 TXNDC11Q6PKC3 985 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 SARM1Q6SZW1 724 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 RNF19BQ6ZMZ0 732 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 PIK3AP1Q6ZUJ8 805 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 MAEAQ7L5Y9 396 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 DNAJB7Q7Z6W7 309 aaPredicted RBP6.48□□□□□ -1.37
CPSF7-219ENST00000539952 DRC7Q8IY82 874 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 C3orf58Q8NDZ4 430 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 DEPTORQ8TB45 409 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 SHKBP1Q8TBC3 707 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 BPIFB1Q8TDL5 484 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 PIGOQ8TEQ8 1089 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 GATA6Q92908 595 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 SUSD3Q96L08 255 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 IFT74Q96LB3 600 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 PCMTD1Q96MG8 357 aaPredicted RBP6.48□□□□□ -1.37
CPSF7-219ENST00000539952 ACAP3Q96P50 834 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 LLPHQ9BRT6 129 aaKnown RBP6.48□□□□□ -1.37
CPSF7-219ENST00000539952 EDEM2Q9BV94 578 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 SCNM1Q9BWG6 230 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 LRRC3Q9BY71 257 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 DUSP15Q9H1R2 295 aaPredicted RBP6.48□□□□□ -1.37
CPSF7-219ENST00000539952 CXCL16Q9H2A7 254 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 ATXN3LQ9H3M9 355 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 SLC32A1Q9H598 525 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 TTC12Q9H892 705 aaPredicted RBP6.48□□□□□ -1.37
CPSF7-219ENST00000539952 NCOA5Q9HCD5 579 aaKnown RBP6.48□□□□□ -1.37
CPSF7-219ENST00000539952 KCND1Q9NSA2 647 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 C2orf42Q9NWW7 574 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 HSFX1Q9UBD0 423 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 EBF1Q9UH73 591 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 KCNG1Q9UIX4 513 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 PCDHGC3Q9UN70 934 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 KCNJ14Q9UNX9 436 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 MSRB2Q9Y3D2 182 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 NEUROG3Q9Y4Z2 214 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.48□□□□□ -1.37
CPSF7-219ENST00000539952 PHLPP2Q6ZVD8 1323 aa6.48□□□□□ -1.37
CPSF7-219ENST00000539952 COL4A3Q01955 1670 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 H0Y626 953 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 GOLGA6L19H0YKK7 550 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 TAF4O00268 1085 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 GIPC1O14908 333 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 CCP110O43303 1012 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 CDKL5O76039 1030 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 TRIM16O95361 564 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 CPB1P15086 417 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 KCNE1P15382 129 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 LIG1P18858 919 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 MUTP22033 750 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 GRM5P41594 1212 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 TXKP42681 527 aa6.47□□□□□ -1.37
CPSF7-219ENST00000539952 PXNP49023 591 aaPredicted RBP6.47□□□□□ -1.37
CPSF7-219ENST00000539952 TUFMP49411 452 aaKnown RBP6.47□□□□□ -1.37
CPSF7-219ENST00000539952 DNM1Q05193 864 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms