RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 GBP2P32456 591 aaPredicted RBP11.49□□□□□ -0.57
HMGA2-209ENST00000539662 PSMC1P62191 440 aaKnown RBP11.49□□□□□ -0.57
HMGA2-209ENST00000539662 MYO1EQ12965 1108 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 NCOA4Q13772 614 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 EDRF1Q3B7T1 1238 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 WDR72Q3MJ13 1102 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 ZACNQ401N2 412 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 PRSS36Q5K4E3 855 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 TOP6BLQ8N6T0 577 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 TDRD5Q8NAT2 981 aaKnown RBP11.49□□□□□ -0.57
HMGA2-209ENST00000539662 GPT2Q8TD30 523 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 TMC2Q8TDI7 906 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 TAS1R2Q8TE23 839 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 SEMA4DQ92854 862 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 CCDC34Q96HJ3 373 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 MMS19Q96T76 1030 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 CORO1BQ9BR76 489 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 LRRC3Q9BY71 257 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 DPEP3Q9H4B8 488 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 SMYD3Q9H7B4 428 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 APOBEC3GQ9HC16 384 aaKnown RBP11.49□□□□□ -0.57
HMGA2-209ENST00000539662 ZNF334Q9HCZ1 680 aaPredicted RBP11.49□□□□□ -0.57
HMGA2-209ENST00000539662 KIAA1468Q9P260 1216 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 NXF1Q9UBU9 619 aaKnown RBP11.49□□□□□ -0.57
HMGA2-209ENST00000539662 DSEQ9UL01 958 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 CTNND2Q9UQB3 1225 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 USTQ9Y2C2 406 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 FRMD4BQ9Y2L6 1034 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 NR2E1Q9Y466 385 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 TECTAO75443 2155 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 COL4A3Q01955 1670 aa11.49□□□□□ -0.57
HMGA2-209ENST00000539662 MAPK13O15264 365 aa11.48□□□□□ -0.57
HMGA2-209ENST00000539662 DCXO43602 365 aa11.48□□□□□ -0.57
HMGA2-209ENST00000539662 HLA-DRAP01903 254 aa11.48□□□□□ -0.57
HMGA2-209ENST00000539662 CYP2F1P24903 491 aa11.48□□□□□ -0.57
HMGA2-209ENST00000539662 PSMC2P35998 433 aaKnown RBP11.48□□□□□ -0.57
HMGA2-209ENST00000539662 MCCD1P59942 119 aaPredicted RBP11.48□□□□□ -0.57
HMGA2-209ENST00000539662 ORC1Q13415 861 aa11.48□□□□□ -0.57
HMGA2-209ENST00000539662 TRPC3Q13507 836 aa11.48□□□□□ -0.57
HMGA2-209ENST00000539662 PABPC1LQ4VXU2 614 aaKnown RBP11.48□□□□□ -0.57
HMGA2-209ENST00000539662 INTS6LQ5JSJ4 861 aaKnown RBP11.48□□□□□ -0.57
HMGA2-209ENST00000539662 TTI2Q6NXR4 508 aa11.48□□□□□ -0.57
HMGA2-209ENST00000539662 ELMSAN1Q6PJG2 1045 aa11.48□□□□□ -0.57
HMGA2-209ENST00000539662 CYP26C1Q6V0L0 522 aa11.48□□□□□ -0.57
HMGA2-209ENST00000539662 SCARA5Q6ZMJ2 495 aa11.48□□□□□ -0.57
HMGA2-209ENST00000539662 ZDHHC14Q8IZN3 488 aa11.48□□□□□ -0.57
HMGA2-209ENST00000539662 THEM5Q8N1Q8 247 aa11.48□□□□□ -0.57
HMGA2-209ENST00000539662 GIPC2Q8TF65 315 aa11.48□□□□□ -0.57
HMGA2-209ENST00000539662 NELFBQ8WX92 580 aa11.48□□□□□ -0.57
HMGA2-209ENST00000539662 FGF13Q92913 245 aa11.48□□□□□ -0.57
HMGA2-209ENST00000539662 ZSWIM3Q96MP5 696 aa11.48□□□□□ -0.57
HMGA2-209ENST00000539662 SEPT5Q99719 369 aaPredicted RBP11.48□□□□□ -0.57
HMGA2-209ENST00000539662 CLSTN2Q9H4D0 955 aa11.48□□□□□ -0.57
HMGA2-209ENST00000539662 ABI2Q9NYB9 513 aaPredicted RBP11.48□□□□□ -0.57
HMGA2-209ENST00000539662 HMGXB4Q9UGU5 601 aa11.48□□□□□ -0.57
HMGA2-209ENST00000539662 HOOK1Q9UJC3 728 aaKnown RBP11.48□□□□□ -0.57
HMGA2-209ENST00000539662 PTPRDP23468 1912 aa11.48□□□□□ -0.57
HMGA2-209ENST00000539662 CETN3O15182 167 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 NARSO43776 548 aaKnown RBP11.47□□□□□ -0.57
HMGA2-209ENST00000539662 XYLBO75191 536 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 POU2F2P09086 479 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 HAPLN1P10915 354 aaPredicted RBP11.47□□□□□ -0.57
HMGA2-209ENST00000539662 LAMP2P13473 410 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 PTPN2P17706 415 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 WARSP23381 471 aaKnown RBP11.47□□□□□ -0.57
HMGA2-209ENST00000539662 RPL13P26373 211 aaKnown RBP11.47□□□□□ -0.57
HMGA2-209ENST00000539662 ZXDAP98168 799 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 MTMR3Q13615 1198 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 PTPN21Q16825 1174 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 ZNF699Q32M78 642 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 MGAT5BQ3V5L5 792 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 CBWD6Q4V339 395 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 CBWD3Q5JTY5 395 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 CBWD5Q5RIA9 395 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 STXBP5Q5T5C0 1151 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 FAM171BQ6P995 826 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 PARM1Q6UWI2 310 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 INTS8Q75QN2 995 aaKnown RBP11.47□□□□□ -0.57
HMGA2-209ENST00000539662 OTOP3Q7RTS5 596 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 TMC8Q8IU68 726 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 GPIHBP1Q8IV16 184 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 NPAS3Q8IXF0 933 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 TMEM86AQ8N2M4 240 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 FGF14Q92915 247 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 MCRS1Q96EZ8 462 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 DHTKD1Q96HY7 919 aaPredicted RBP11.47□□□□□ -0.57
HMGA2-209ENST00000539662 SYT15Q9BQS2 421 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 ACBD6Q9BR61 282 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 KCNK12Q9HB15 430 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 TMEM30AQ9NV96 361 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 EPS15L1Q9UBC2 864 aa11.47□□□□□ -0.57
HMGA2-209ENST00000539662 NCANO14594 1321 aa11.46□□□□□ -0.57
HMGA2-209ENST00000539662 IKBKBO14920 756 aa11.46□□□□□ -0.57
HMGA2-209ENST00000539662 STAU1O95793 577 aaKnown RBP11.46□□□□□ -0.57
HMGA2-209ENST00000539662 ASS1P00966 412 aaKnown RBP11.46□□□□□ -0.57
HMGA2-209ENST00000539662 PDGFBP01127 241 aaPredicted RBP11.46□□□□□ -0.57
HMGA2-209ENST00000539662 MYL4P12829 197 aa11.46□□□□□ -0.57
HMGA2-209ENST00000539662 ATICP31939 592 aa11.46□□□□□ -0.57
HMGA2-209ENST00000539662 GNL1P36915 607 aaPredicted RBP11.46□□□□□ -0.57
HMGA2-209ENST00000539662 ASPAP45381 313 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms