RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 MMP19Q99542 508 aa4.27□□□□□ -1.73
AC055720.1-201ENST00000539552 MAGEH1Q9H213 219 aa4.27□□□□□ -1.73
AC055720.1-201ENST00000539552 CHMP4BQ9H444 224 aaKnown RBP4.27□□□□□ -1.73
AC055720.1-201ENST00000539552 ZWILCHQ9H900 591 aa4.27□□□□□ -1.73
AC055720.1-201ENST00000539552 PDRG1Q9NUG6 133 aa4.27□□□□□ -1.73
AC055720.1-201ENST00000539552 AP5S1Q9NUS5 200 aa4.27□□□□□ -1.73
AC055720.1-201ENST00000539552 IRAK4Q9NWZ3 460 aa4.27□□□□□ -1.73
AC055720.1-201ENST00000539552 CLDND1Q9NY35 253 aa4.27□□□□□ -1.73
AC055720.1-201ENST00000539552 CEP72Q9P209 647 aa4.27□□□□□ -1.73
AC055720.1-201ENST00000539552 ORC3Q9UBD5 711 aaPredicted RBP4.27□□□□□ -1.73
AC055720.1-201ENST00000539552 AASSQ9UDR5 926 aa4.27□□□□□ -1.73
AC055720.1-201ENST00000539552 CORO2BQ9UQ03 480 aa4.27□□□□□ -1.73
AC055720.1-201ENST00000539552 RRP7AQ9Y3A4 280 aaKnown RBP4.27□□□□□ -1.73
AC055720.1-201ENST00000539552 SPO11Q9Y5K1 396 aa4.27□□□□□ -1.73
AC055720.1-201ENST00000539552 SBF2Q86WG5 1849 aa4.27□□□□□ -1.73
AC055720.1-201ENST00000539552 PAPPAQ13219 1627 aa4.27□□□□□ -1.73
AC055720.1-201ENST00000539552 PGPEP1LA6NFU8 196 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 H7C0S8 307 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 TGM5O43548 720 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 KDM1AO60341 852 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 PPFIA2O75334 1257 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 DGKIO75912 1065 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 CYP17A1P05093 508 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 CKMT1AP12532 417 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 TSHRP16473 764 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 CNTFP26441 200 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 HTR1BP28222 390 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 MC3RP41968 323 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 IL12RB1P42701 662 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 KIF11P52732 1056 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 SLC5A3P53794 718 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 GALNT1Q10472 559 aaPredicted RBP4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 CDC16Q13042 620 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 SCARB2Q14108 478 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 TAF5Q15542 800 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 TESK1Q15569 626 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 PTPN14Q15678 1187 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 GPR19Q15760 415 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 UAP1L1Q3KQV9 507 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 ZACNQ401N2 412 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 FBXO47Q5MNV8 452 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 DENND5AQ6IQ26 1287 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 SLC30A6Q6NXT4 461 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 CYP2R1Q6VVX0 501 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 CATSPER4Q7RTX7 472 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 PLEKHH3Q7Z736 793 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 SDCCAG8Q86SQ7 713 aaPredicted RBP4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 VSIG1Q86XK7 387 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 NME9Q86XW9 330 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 PALM2Q8IXS6 379 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 NLGN4XQ8N0W4 816 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 GALNT15Q8N3T1 639 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 PRR18Q8N4B5 295 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 ANKRD52Q8NB46 1076 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 CCDC191Q8NCU4 936 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 RCBTB1Q8NDN9 531 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 SIMC1Q8NDZ2 872 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 CENPTQ96BT3 561 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 TIGD1Q96MW7 591 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 FCRL3Q96P31 734 aaPredicted RBP4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 LRFN3Q9BTN0 628 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 KLC2Q9H0B6 622 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 ABCF3Q9NUQ8 709 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 BTG4Q9NY30 223 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 H2AFY2Q9P0M6 372 aaPredicted RBP4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 NUDT5Q9UKK9 219 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 SIK3Q9Y2K2 1263 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 TCAF1Q9Y4C2 921 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 SYCP2Q9BX26 1530 aa4.26□□□□□ -1.73
AC055720.1-201ENST00000539552 CASP8AP2Q9UKL3 1982 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 WDR33Q9C0J8 1336 aaKnown RBP4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 A0A1W2PPH5 198 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 GOLGA6L3A6NEY3 463 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 MROH6A6NGR9 719 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 H7BY64 318 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 KRIT1O00522 736 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 WNT9AO14904 365 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 USO1O60763 962 aaKnown RBP4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 SOAT2O75908 522 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 ZNF205O95201 554 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 APOA4P06727 396 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 SLC3A2P08195 630 aaKnown RBP4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 MYF5P13349 255 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 IFNGR1P15260 489 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 VAV1P15498 845 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 ALOX12P18054 663 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 SLC9A1P19634 815 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 PDCP20941 246 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 DCCP43146 1447 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 HSPA7P48741 367 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 MTNR1BP49286 362 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 HNRNPMP52272 730 aaKnown RBP eCLIP4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 TMF1P82094 1093 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 LACTBP83111 547 aaPredicted RBP4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 TLE2Q04725 743 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 MTA1Q13330 715 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 FHL2Q14192 279 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 MPEG1Q2M385 716 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 PGS1Q32NB8 556 aa4.25□□□□□ -1.73
AC055720.1-201ENST00000539552 CCDC157Q569K6 752 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms