RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 CDH5P33151 784 aaPredicted RBP11.8□□□□□ -0.52
CTCFL-212ENST00000539382 CDK7P50613 346 aa11.8□□□□□ -0.52
CTCFL-212ENST00000539382 YWHAEP62258 255 aaKnown RBP11.8□□□□□ -0.52
CTCFL-212ENST00000539382 GPNMBQ14956 572 aa11.8□□□□□ -0.52
CTCFL-212ENST00000539382 TMCO3Q6UWJ1 677 aa11.8□□□□□ -0.52
CTCFL-212ENST00000539382 ZNF572Q7Z3I7 529 aaPredicted RBP11.8□□□□□ -0.52
CTCFL-212ENST00000539382 MRPL10Q7Z7H8 261 aaKnown RBP11.8□□□□□ -0.52
CTCFL-212ENST00000539382 SYCE1Q8N0S2 351 aa11.8□□□□□ -0.52
CTCFL-212ENST00000539382 SPATA4Q8NEY3 305 aa11.8□□□□□ -0.52
CTCFL-212ENST00000539382 CAGE1Q8TC20 777 aa11.8□□□□□ -0.52
CTCFL-212ENST00000539382 KBTBD7Q8WVZ9 684 aa11.8□□□□□ -0.52
CTCFL-212ENST00000539382 HEXIM2Q96MH2 286 aaKnown RBP11.8□□□□□ -0.52
CTCFL-212ENST00000539382 DPEP3Q9H4B8 488 aa11.8□□□□□ -0.52
CTCFL-212ENST00000539382 AVENQ9NQS1 362 aaPredicted RBP11.8□□□□□ -0.52
CTCFL-212ENST00000539382 FAM53CQ9NYF3 392 aa11.8□□□□□ -0.52
CTCFL-212ENST00000539382 AMFRQ9UKV5 643 aa11.8□□□□□ -0.52
CTCFL-212ENST00000539382 A0A0U1RQF3 1178 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 A0A0U1RQG5 324 aaPredicted RBP11.79□□□□□ -0.52
CTCFL-212ENST00000539382 TCRBV5S1A1TA0A578 114 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 KPNA7A9QM74 516 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 O00370 1275 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 MICAL2O94851 1124 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 CD4P01730 458 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 RPLP2P05387 115 aaKnown RBP11.79□□□□□ -0.52
CTCFL-212ENST00000539382 RHOXF2BP0C7M4 288 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 LMO2P25791 158 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 SCNN1GP51170 649 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 LILRA4P59901 499 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 RPL7AP62424 266 aaKnown RBP11.79□□□□□ -0.52
CTCFL-212ENST00000539382 MRPS25P82663 173 aaKnown RBP11.79□□□□□ -0.52
CTCFL-212ENST00000539382 PTPN20Q4JDL3 420 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 CYP4A22Q5TCH4 519 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 PLEKHA7Q6IQ23 1121 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 C11orf63Q6NUN7 778 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 AADACL2Q6P093 401 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 DPH6Q7L8W6 267 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 ACOT1Q86TX2 421 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 GPR161Q8N6U8 529 aaKnown RBP11.79□□□□□ -0.52
CTCFL-212ENST00000539382 RNF169Q8NCN4 708 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 C3orf58Q8NDZ4 430 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 CD101Q93033 1021 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 RHOXF2Q9BQY4 288 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 UVRAGQ9P2Y5 699 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 ANAPC7Q9UJX3 599 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.79□□□□□ -0.52
CTCFL-212ENST00000539382 ZNF623O75123 536 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 LSM8O95777 96 aaKnown RBP11.79□□□□□ -0.52
CTCFL-212ENST00000539382 CDR1P51861 262 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 KCTD19Q17RG1 926 aaPredicted RBP11.79□□□□□ -0.52
CTCFL-212ENST00000539382 CCDC142Q17RM4 750 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 LIMS2Q7Z4I7 341 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 TMEM35BQ8NCS4 154 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 UBA3Q8TBC4 463 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 LINC01599Q8WXQ3 324 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 CPXM1Q96SM3 734 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 PNKPQ96T60 521 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 TRAIPQ9BWF2 469 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 NT5C1AQ9BXI3 368 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 LHX5Q9H2C1 402 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 RBM12Q9NTZ6 932 aaKnown RBP11.79□□□□□ -0.52
CTCFL-212ENST00000539382 WBP1LQ9NX94 342 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 L1RE1Q9UN81 338 aa11.79□□□□□ -0.52
CTCFL-212ENST00000539382 KBTBD13C9JR72 458 aa11.78□□□□□ -0.52
CTCFL-212ENST00000539382 DNM1LO00429 736 aa11.78□□□□□ -0.52
CTCFL-212ENST00000539382 SEC31AO94979 1220 aaKnown RBP11.78□□□□□ -0.52
CTCFL-212ENST00000539382 ZRANB2O95218 330 aaKnown RBP eCLIP11.78□□□□□ -0.52
CTCFL-212ENST00000539382 PFKMP08237 780 aa11.78□□□□□ -0.52
CTCFL-212ENST00000539382 MYBL1P10243 752 aa11.78□□□□□ -0.52
CTCFL-212ENST00000539382 CCL5P13501 91 aa11.78□□□□□ -0.52
CTCFL-212ENST00000539382 LRPAP1P30533 357 aa11.78□□□□□ -0.52
CTCFL-212ENST00000539382 CLCNKBP51801 687 aa11.78□□□□□ -0.52
CTCFL-212ENST00000539382 DMTNQ08495 405 aa11.78□□□□□ -0.52
CTCFL-212ENST00000539382 ZNF211Q13398 564 aaPredicted RBP11.78□□□□□ -0.52
CTCFL-212ENST00000539382 FAM126BQ8IXS8 530 aa11.78□□□□□ -0.52
CTCFL-212ENST00000539382 VCPIP1Q96JH7 1222 aa11.78□□□□□ -0.52
CTCFL-212ENST00000539382 HINFPQ9BQA5 517 aa11.78□□□□□ -0.52
CTCFL-212ENST00000539382 PARD6BQ9BYG5 372 aa11.78□□□□□ -0.52
CTCFL-212ENST00000539382 RNF208Q9H0X6 261 aa11.78□□□□□ -0.52
CTCFL-212ENST00000539382 GDAP2Q9NXN4 497 aa11.78□□□□□ -0.52
CTCFL-212ENST00000539382 TULP2O00295 520 aa11.77□□□□□ -0.52
CTCFL-212ENST00000539382 CEP104O60308 925 aa11.77□□□□□ -0.52
CTCFL-212ENST00000539382 POMCP01189 267 aa11.77□□□□□ -0.52
CTCFL-212ENST00000539382 PDGFRBP09619 1106 aa11.77□□□□□ -0.52
CTCFL-212ENST00000539382 VDRP11473 427 aa11.77□□□□□ -0.52
CTCFL-212ENST00000539382 GPD2P43304 727 aa11.77□□□□□ -0.52
CTCFL-212ENST00000539382 TAF6P49848 677 aa11.77□□□□□ -0.52
CTCFL-212ENST00000539382 PEX5P50542 639 aa11.77□□□□□ -0.52
CTCFL-212ENST00000539382 CKAP4Q07065 602 aaKnown RBP11.77□□□□□ -0.52
CTCFL-212ENST00000539382 CNGA2Q16280 664 aa11.77□□□□□ -0.52
CTCFL-212ENST00000539382 PPP1R26Q5T8A7 1209 aaPredicted RBP11.77□□□□□ -0.52
CTCFL-212ENST00000539382 ZNF598Q86UK7 904 aaKnown RBP11.77□□□□□ -0.52
CTCFL-212ENST00000539382 OR6B3Q8NGW1 331 aa11.77□□□□□ -0.52
CTCFL-212ENST00000539382 HDAC7Q8WUI4 952 aa11.77□□□□□ -0.52
CTCFL-212ENST00000539382 TSPAN18Q96SJ8 248 aa11.77□□□□□ -0.52
CTCFL-212ENST00000539382 BEGAINQ9BUH8 593 aa11.77□□□□□ -0.52
CTCFL-212ENST00000539382 TSPYL2Q9H2G4 693 aaPredicted RBP11.77□□□□□ -0.52
CTCFL-212ENST00000539382 FAM49BQ9NUQ9 324 aa11.77□□□□□ -0.52
CTCFL-212ENST00000539382 NR2E1Q9Y466 385 aa11.77□□□□□ -0.52
CTCFL-212ENST00000539382 CASTOR2A6NHX0 329 aa11.77□□□□□ -0.53
CTCFL-212ENST00000539382 THP07101 528 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms