RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 INTS13Q9NVM9 706 aa20.52■□□□□ 0.88
TNFRSF1A-212ENST00000539372 HSFX1Q9UBD0 423 aa20.52■□□□□ 0.88
TNFRSF1A-212ENST00000539372 SERTAD1Q9UHV2 236 aa20.52■□□□□ 0.88
TNFRSF1A-212ENST00000539372 SNX9Q9Y5X1 595 aa20.52■□□□□ 0.88
TNFRSF1A-212ENST00000539372 NCANO14594 1321 aa20.52■□□□□ 0.87
TNFRSF1A-212ENST00000539372 CLIC2O15247 247 aa20.51■□□□□ 0.87
TNFRSF1A-212ENST00000539372 HUS1O60921 280 aa20.51■□□□□ 0.87
TNFRSF1A-212ENST00000539372 ATF6P18850 670 aa20.51■□□□□ 0.87
TNFRSF1A-212ENST00000539372 CYP2J2P51589 502 aa20.51■□□□□ 0.87
TNFRSF1A-212ENST00000539372 TSPY1Q01534 308 aa20.51■□□□□ 0.87
TNFRSF1A-212ENST00000539372 VEPH1Q14D04 833 aa20.51■□□□□ 0.87
TNFRSF1A-212ENST00000539372 GAREM2Q75VX8 874 aa20.51■□□□□ 0.87
TNFRSF1A-212ENST00000539372 ITIH5Q86UX2 942 aa20.51■□□□□ 0.87
TNFRSF1A-212ENST00000539372 CEP57L1Q8IYX8 460 aa20.51■□□□□ 0.87
TNFRSF1A-212ENST00000539372 DCP1BQ8IZD4 617 aaKnown RBP20.51■□□□□ 0.87
TNFRSF1A-212ENST00000539372 ATXN3LQ9H3M9 355 aa20.51■□□□□ 0.87
TNFRSF1A-212ENST00000539372 DDX43Q9NXZ2 648 aaKnown RBP20.51■□□□□ 0.87
TNFRSF1A-212ENST00000539372 UBE4BO95155 1302 aa20.51■□□□□ 0.87
TNFRSF1A-212ENST00000539372 FAM170BA6NMN3 283 aa20.5■□□□□ 0.87
TNFRSF1A-212ENST00000539372 TNNC2P02585 160 aa20.5■□□□□ 0.87
TNFRSF1A-212ENST00000539372 HAPLN1P10915 354 aaPredicted RBP20.5■□□□□ 0.87
TNFRSF1A-212ENST00000539372 PSMC3P17980 439 aa20.5■□□□□ 0.87
TNFRSF1A-212ENST00000539372 ACAT1P24752 427 aaKnown RBP20.5■□□□□ 0.87
TNFRSF1A-212ENST00000539372 GABRR2P28476 465 aa20.5■□□□□ 0.87
TNFRSF1A-212ENST00000539372 GDI1P31150 447 aa20.5■□□□□ 0.87
TNFRSF1A-212ENST00000539372 NBL1P41271 181 aa20.5■□□□□ 0.87
TNFRSF1A-212ENST00000539372 OSTM1Q86WC4 334 aa20.5■□□□□ 0.87
TNFRSF1A-212ENST00000539372 SPPL2BQ8TCT7 592 aa20.5■□□□□ 0.87
TNFRSF1A-212ENST00000539372 C2orf15Q8WU43 125 aaKnown RBP20.5■□□□□ 0.87
TNFRSF1A-212ENST00000539372 RSPRY1Q96DX4 576 aa20.5■□□□□ 0.87
TNFRSF1A-212ENST00000539372 PI4K2AQ9BTU6 479 aa20.5■□□□□ 0.87
TNFRSF1A-212ENST00000539372 GPR88Q9GZN0 384 aa20.5■□□□□ 0.87
TNFRSF1A-212ENST00000539372 TRPV4Q9HBA0 871 aa20.5■□□□□ 0.87
TNFRSF1A-212ENST00000539372 ZDHHC9Q9Y397 364 aa20.5■□□□□ 0.87
TNFRSF1A-212ENST00000539372 R3HCC1Q9Y3T6 440 aaKnown RBP20.5■□□□□ 0.87
TNFRSF1A-212ENST00000539372 MYO15AQ9UKN7 3530 aa20.5■□□□□ 0.87
TNFRSF1A-212ENST00000539372 PVALEFA0A1B0GWK0 134 aa20.49■□□□□ 0.87
TNFRSF1A-212ENST00000539372 HEPACAM2A8MVW5 462 aa20.49■□□□□ 0.87
TNFRSF1A-212ENST00000539372 PROB1E7EW31 1015 aa20.49■□□□□ 0.87
TNFRSF1A-212ENST00000539372 HCRTO43612 131 aa20.49■□□□□ 0.87
TNFRSF1A-212ENST00000539372 ACTN4O43707 911 aaKnown RBP20.49■□□□□ 0.87
TNFRSF1A-212ENST00000539372 GPR15P49685 360 aa20.49■□□□□ 0.87
TNFRSF1A-212ENST00000539372 SMARCB1Q12824 385 aa20.49■□□□□ 0.87
TNFRSF1A-212ENST00000539372 SURF1Q15526 300 aa20.49■□□□□ 0.87
TNFRSF1A-212ENST00000539372 TAF12Q16514 161 aa20.49■□□□□ 0.87
TNFRSF1A-212ENST00000539372 SNRNP35Q16560 246 aaKnown RBP20.49■□□□□ 0.87
TNFRSF1A-212ENST00000539372 DUOXA2Q1HG44 320 aa20.49■□□□□ 0.87
TNFRSF1A-212ENST00000539372 GPR158Q5T848 1215 aa20.49■□□□□ 0.87
TNFRSF1A-212ENST00000539372 ADGRF2Q8IZF7 708 aa20.49■□□□□ 0.87
TNFRSF1A-212ENST00000539372 TMEM86AQ8N2M4 240 aa20.49■□□□□ 0.87
TNFRSF1A-212ENST00000539372 LEO1Q8WVC0 666 aaPredicted RBP20.49■□□□□ 0.87
TNFRSF1A-212ENST00000539372 DNASE1L2Q92874 299 aa20.49■□□□□ 0.87
TNFRSF1A-212ENST00000539372 KIAA1586Q9HCI6 787 aa20.49■□□□□ 0.87
TNFRSF1A-212ENST00000539372 LTB4R2Q9NPC1 389 aa20.49■□□□□ 0.87
TNFRSF1A-212ENST00000539372 GDAP2Q9NXN4 497 aa20.49■□□□□ 0.87
TNFRSF1A-212ENST00000539372 PCDHB5Q9Y5E4 795 aa20.49■□□□□ 0.87
TNFRSF1A-212ENST00000539372 USP34Q70CQ2 3546 aa20.49■□□□□ 0.87
TNFRSF1A-212ENST00000539372 A0A1B0GVL5 298 aa20.48■□□□□ 0.87
TNFRSF1A-212ENST00000539372 FGF19O95750 216 aa20.48■□□□□ 0.87
TNFRSF1A-212ENST00000539372 SLFN14P0C7P3 912 aa20.48■□□□□ 0.87
TNFRSF1A-212ENST00000539372 DLATP10515 647 aaKnown RBP20.48■□□□□ 0.87
TNFRSF1A-212ENST00000539372 PFKFB1P16118 471 aa20.48■□□□□ 0.87
TNFRSF1A-212ENST00000539372 TARSP26639 723 aaKnown RBP20.48■□□□□ 0.87
TNFRSF1A-212ENST00000539372 CYP4F8P98187 520 aa20.48■□□□□ 0.87
TNFRSF1A-212ENST00000539372 MYL7Q01449 175 aa20.48■□□□□ 0.87
TNFRSF1A-212ENST00000539372 MYO1EQ12965 1108 aa20.48■□□□□ 0.87
TNFRSF1A-212ENST00000539372 CCDC142Q17RM4 750 aa20.48■□□□□ 0.87
TNFRSF1A-212ENST00000539372 HS2ST1Q7LGA3 356 aa20.48■□□□□ 0.87
TNFRSF1A-212ENST00000539372 ASCL5Q7RTU5 278 aa20.48■□□□□ 0.87
TNFRSF1A-212ENST00000539372 ARID3BQ8IVW6 561 aaPredicted RBP20.48■□□□□ 0.87
TNFRSF1A-212ENST00000539372 C1orf210Q8IVY1 113 aa20.48■□□□□ 0.87
TNFRSF1A-212ENST00000539372 TOP6BLQ8N6T0 577 aa20.48■□□□□ 0.87
TNFRSF1A-212ENST00000539372 STKLD1Q8NE28 680 aa20.48■□□□□ 0.87
TNFRSF1A-212ENST00000539372 DEPDC1BQ8WUY9 529 aa20.48■□□□□ 0.87
TNFRSF1A-212ENST00000539372 IRF7Q92985 503 aa20.48■□□□□ 0.87
TNFRSF1A-212ENST00000539372 CCDC127Q96BQ5 260 aa20.48■□□□□ 0.87
TNFRSF1A-212ENST00000539372 PAGE5Q96GU1 130 aa20.48■□□□□ 0.87
TNFRSF1A-212ENST00000539372 HPDLQ96IR7 371 aa20.48■□□□□ 0.87
TNFRSF1A-212ENST00000539372 SPATA32Q96LK8 384 aa20.48■□□□□ 0.87
TNFRSF1A-212ENST00000539372 ACBD6Q9BR61 282 aa20.48■□□□□ 0.87
TNFRSF1A-212ENST00000539372 MKNK1Q9BUB5 465 aa20.48■□□□□ 0.87
TNFRSF1A-212ENST00000539372 ZNF263O14978 683 aa20.47■□□□□ 0.87
TNFRSF1A-212ENST00000539372 PRPF40AO75400 957 aaKnown RBP20.47■□□□□ 0.87
TNFRSF1A-212ENST00000539372 CYP24A1Q07973 514 aa20.47■□□□□ 0.87
TNFRSF1A-212ENST00000539372 BMT2Q1RMZ1 405 aa20.47■□□□□ 0.87
TNFRSF1A-212ENST00000539372 SOWAHAQ2M3V2 549 aa20.47■□□□□ 0.87
TNFRSF1A-212ENST00000539372 ARHGAP15Q53QZ3 475 aa20.47■□□□□ 0.87
TNFRSF1A-212ENST00000539372 INTS6LQ5JSJ4 861 aaKnown RBP20.47■□□□□ 0.87
TNFRSF1A-212ENST00000539372 SDHAF4Q5VUM1 108 aa20.47■□□□□ 0.87
TNFRSF1A-212ENST00000539372 ZNF852Q6ZMS4 543 aa20.47■□□□□ 0.87
TNFRSF1A-212ENST00000539372 WDR49Q8IV35 697 aa20.47■□□□□ 0.87
TNFRSF1A-212ENST00000539372 MFSD6LQ8IWD5 586 aa20.47■□□□□ 0.87
TNFRSF1A-212ENST00000539372 XXYLT1Q8NBI6 393 aa20.47■□□□□ 0.87
TNFRSF1A-212ENST00000539372 FNBP1Q96RU3 617 aa20.47■□□□□ 0.87
TNFRSF1A-212ENST00000539372 BCO2Q9BYV7 579 aa20.47■□□□□ 0.87
TNFRSF1A-212ENST00000539372 IL21Q9HBE4 155 aa20.47■□□□□ 0.87
TNFRSF1A-212ENST00000539372 SHISA7A6NL88 538 aa20.46■□□□□ 0.87
TNFRSF1A-212ENST00000539372 KLRC4O43908 158 aa20.46■□□□□ 0.87
TNFRSF1A-212ENST00000539372 TNNI1P19237 187 aa20.46■□□□□ 0.87
TNFRSF1A-212ENST00000539372 CMA1P23946 247 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms