RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 TTC9BQ8N6N2 239 aa14.71□□□□□ -0.05
CD9-208ENST00000538834 ATAD1Q8NBU5 361 aa14.71□□□□□ -0.05
CD9-208ENST00000538834 CYP4F11Q9HBI6 524 aa14.71□□□□□ -0.05
CD9-208ENST00000538834 HCFC1R1Q9NWW0 138 aa14.71□□□□□ -0.05
CD9-208ENST00000538834 YIPF1Q9Y548 306 aa14.71□□□□□ -0.05
CD9-208ENST00000538834 ZFP37Q9Y6Q3 630 aaPredicted RBP14.71□□□□□ -0.05
CD9-208ENST00000538834 ZDBF2Q9HCK1 2354 aa14.7□□□□□ -0.06
CD9-208ENST00000538834 TRIM49BA6NDI0 452 aa14.7□□□□□ -0.06
CD9-208ENST00000538834 PMM2O15305 246 aa14.7□□□□□ -0.06
CD9-208ENST00000538834 SLC16A3O15427 465 aaKnown RBP14.7□□□□□ -0.06
CD9-208ENST00000538834 GPR37L1O60883 481 aa14.7□□□□□ -0.06
CD9-208ENST00000538834 RHOP08100 348 aa14.7□□□□□ -0.06
CD9-208ENST00000538834 HAPLN1P10915 354 aaPredicted RBP14.7□□□□□ -0.06
CD9-208ENST00000538834 LAMP2P13473 410 aa14.7□□□□□ -0.06
CD9-208ENST00000538834 ALADP13716 330 aa14.7□□□□□ -0.06
CD9-208ENST00000538834 LMO2P25791 158 aa14.7□□□□□ -0.06
CD9-208ENST00000538834 ELF1P32519 619 aa14.7□□□□□ -0.06
CD9-208ENST00000538834 CCR2P41597 374 aa14.7□□□□□ -0.06
CD9-208ENST00000538834 NCOA4Q13772 614 aa14.7□□□□□ -0.06
CD9-208ENST00000538834 PTPN21Q16825 1174 aa14.7□□□□□ -0.06
CD9-208ENST00000538834 SLC5A9Q2M3M2 681 aa14.7□□□□□ -0.06
CD9-208ENST00000538834 TMC8Q8IU68 726 aa14.7□□□□□ -0.06
CD9-208ENST00000538834 ADGRF2Q8IZF7 708 aa14.7□□□□□ -0.06
CD9-208ENST00000538834 TDRD5Q8NAT2 981 aaKnown RBP14.7□□□□□ -0.06
CD9-208ENST00000538834 SPPL2BQ8TCT7 592 aa14.7□□□□□ -0.06
CD9-208ENST00000538834 TAF4BQ92750 862 aa14.7□□□□□ -0.06
CD9-208ENST00000538834 EDAQ92838 391 aa14.7□□□□□ -0.06
CD9-208ENST00000538834 SYAP1Q96A49 352 aaPredicted RBP14.7□□□□□ -0.06
CD9-208ENST00000538834 FAXDC2Q96IV6 333 aa14.7□□□□□ -0.06
CD9-208ENST00000538834 CLSTN2Q9H4D0 955 aa14.7□□□□□ -0.06
CD9-208ENST00000538834 ABCB6Q9NP58 842 aa14.7□□□□□ -0.06
CD9-208ENST00000538834 DDX43Q9NXZ2 648 aaKnown RBP14.7□□□□□ -0.06
CD9-208ENST00000538834 MUTYHQ9UIF7 546 aa14.7□□□□□ -0.06
CD9-208ENST00000538834 COQ4Q9Y3A0 265 aa14.7□□□□□ -0.06
CD9-208ENST00000538834 PRRG1O14668 218 aa14.69□□□□□ -0.06
CD9-208ENST00000538834 CETN3O15182 167 aa14.69□□□□□ -0.06
CD9-208ENST00000538834 HCRTO43612 131 aa14.69□□□□□ -0.06
CD9-208ENST00000538834 ATF6P18850 670 aa14.69□□□□□ -0.06
CD9-208ENST00000538834 MARSP56192 900 aaKnown RBP14.69□□□□□ -0.06
CD9-208ENST00000538834 TWF1Q12792 350 aa14.69□□□□□ -0.06
CD9-208ENST00000538834 SGSM1Q2NKQ1 1148 aa14.69□□□□□ -0.06
CD9-208ENST00000538834 WDR72Q3MJ13 1102 aa14.69□□□□□ -0.06
CD9-208ENST00000538834 CFAP221Q4G0U5 840 aa14.69□□□□□ -0.06
CD9-208ENST00000538834 SLC39A12Q504Y0 691 aa14.69□□□□□ -0.06
CD9-208ENST00000538834 ISM2Q6H9L7 571 aa14.69□□□□□ -0.06
CD9-208ENST00000538834 RBM43Q6ZSC3 357 aaKnown RBP14.69□□□□□ -0.06
CD9-208ENST00000538834 FILIP1Q7Z7B0 1213 aa14.69□□□□□ -0.06
CD9-208ENST00000538834 DCP1BQ8IZD4 617 aaKnown RBP14.69□□□□□ -0.06
CD9-208ENST00000538834 ITFG1Q8TB96 612 aa14.69□□□□□ -0.06
CD9-208ENST00000538834 PSMG2Q969U7 264 aa14.69□□□□□ -0.06
CD9-208ENST00000538834 NXPE3Q969Y0 559 aa14.69□□□□□ -0.06
CD9-208ENST00000538834 ACSF2Q96CM8 615 aaPredicted RBP14.69□□□□□ -0.06
CD9-208ENST00000538834 CEP63Q96MT8 703 aa14.69□□□□□ -0.06
CD9-208ENST00000538834 PGLYRP2Q96PD5 576 aa14.69□□□□□ -0.06
CD9-208ENST00000538834 MRPL45Q9BRJ2 306 aaKnown RBP14.69□□□□□ -0.06
CD9-208ENST00000538834 BCO2Q9BYV7 579 aa14.69□□□□□ -0.06
CD9-208ENST00000538834 SDCBP2Q9H190 292 aa14.69□□□□□ -0.06
CD9-208ENST00000538834 PIDD1Q9HB75 910 aa14.69□□□□□ -0.06
CD9-208ENST00000538834 CRTAC1Q9NQ79 661 aa14.69□□□□□ -0.06
CD9-208ENST00000538834 CDH9Q9ULB4 789 aa14.69□□□□□ -0.06
CD9-208ENST00000538834 CDH7Q9ULB5 785 aa14.69□□□□□ -0.06
CD9-208ENST00000538834 ASB3Q9Y575 518 aa14.69□□□□□ -0.06
CD9-208ENST00000538834 MYBPHLA2RUH7 354 aa14.68□□□□□ -0.06
CD9-208ENST00000538834 PSMA7O14818 248 aa14.68□□□□□ -0.06
CD9-208ENST00000538834 LRRN2O75325 713 aa14.68□□□□□ -0.06
CD9-208ENST00000538834 HLA-DRAP01903 254 aa14.68□□□□□ -0.06
CD9-208ENST00000538834 LRG1P02750 347 aa14.68□□□□□ -0.06
CD9-208ENST00000538834 FSHRP23945 695 aa14.68□□□□□ -0.06
CD9-208ENST00000538834 PCSK1P29120 753 aa14.68□□□□□ -0.06
CD9-208ENST00000538834 TUFMP49411 452 aaKnown RBP14.68□□□□□ -0.06
CD9-208ENST00000538834 ZXDAP98168 799 aa14.68□□□□□ -0.06
CD9-208ENST00000538834 MYL7Q01449 175 aa14.68□□□□□ -0.06
CD9-208ENST00000538834 HTR4Q13639 388 aa14.68□□□□□ -0.06
CD9-208ENST00000538834 NFE2Q16621 373 aaPredicted RBP14.68□□□□□ -0.06
CD9-208ENST00000538834 CCDC142Q17RM4 750 aa14.68□□□□□ -0.06
CD9-208ENST00000538834 PABPC1LQ4VXU2 614 aaKnown RBP14.68□□□□□ -0.06
CD9-208ENST00000538834 NPAS3Q8IXF0 933 aa14.68□□□□□ -0.06
CD9-208ENST00000538834 LEMD2Q8NC56 503 aa14.68□□□□□ -0.06
CD9-208ENST00000538834 GPT2Q8TD30 523 aa14.68□□□□□ -0.06
CD9-208ENST00000538834 TAS1R2Q8TE23 839 aa14.68□□□□□ -0.06
CD9-208ENST00000538834 FGF13Q92913 245 aa14.68□□□□□ -0.06
CD9-208ENST00000538834 SLC35C1Q96A29 364 aa14.68□□□□□ -0.06
CD9-208ENST00000538834 EEF2KMTQ96G04 330 aa14.68□□□□□ -0.06
CD9-208ENST00000538834 FUBP3Q96I24 572 aaKnown RBP eCLIP14.68□□□□□ -0.06
CD9-208ENST00000538834 IL21Q9HBE4 155 aa14.68□□□□□ -0.06
CD9-208ENST00000538834 TMEM8AQ9HCN3 771 aa14.68□□□□□ -0.06
CD9-208ENST00000538834 IGSF9Q9P2J2 1179 aa14.68□□□□□ -0.06
CD9-208ENST00000538834 LIMD1Q9UGP4 676 aa14.68□□□□□ -0.06
CD9-208ENST00000538834 POLIQ9UNA4 740 aa14.68□□□□□ -0.06
CD9-208ENST00000538834 SLC27A5Q9Y2P5 690 aa14.68□□□□□ -0.06
CD9-208ENST00000538834 SPDYE4A6NLX3 237 aa14.67□□□□□ -0.06
CD9-208ENST00000538834 ATP2C2O75185 946 aa14.67□□□□□ -0.06
CD9-208ENST00000538834 TRIM49P0CI25 452 aa14.67□□□□□ -0.06
CD9-208ENST00000538834 TRIM49CP0CI26 452 aa14.67□□□□□ -0.06
CD9-208ENST00000538834 HMGA1P17096 107 aaKnown RBP14.67□□□□□ -0.06
CD9-208ENST00000538834 ACAT1P24752 427 aaKnown RBP14.67□□□□□ -0.06
CD9-208ENST00000538834 MAGEA11P43364 429 aa14.67□□□□□ -0.06
CD9-208ENST00000538834 ASPAP45381 313 aa14.67□□□□□ -0.06
CD9-208ENST00000538834 PLD1Q13393 1074 aa14.67□□□□□ -0.06
CD9-208ENST00000538834 TRPC3Q13507 836 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms