RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 ADARB2Q9NS39 739 aaKnown RBP26.32■■□□□ 1.8
RAB40C-204ENST00000538492 TTLL12Q14166 644 aaPredicted RBP26.32■■□□□ 1.8
RAB40C-204ENST00000538492 LRRC14Q15048 493 aa26.32■■□□□ 1.8
RAB40C-204ENST00000538492 ERO1BQ86YB8 467 aa26.32■■□□□ 1.8
RAB40C-204ENST00000538492 MGARPQ8TDB4 240 aa26.32■■□□□ 1.8
RAB40C-204ENST00000538492 FZD8Q9H461 694 aa26.32■■□□□ 1.8
RAB40C-204ENST00000538492 ANK1P16157 1881 aa26.32■■□□□ 1.8
RAB40C-204ENST00000538492 ETS1P14921 441 aa26.31■■□□□ 1.8
RAB40C-204ENST00000538492 CDH8P55286 799 aa26.31■■□□□ 1.8
RAB40C-204ENST00000538492 KCNV1Q6PIU1 500 aa26.31■■□□□ 1.8
RAB40C-204ENST00000538492 SPOCD1Q6ZMY3 1216 aa26.31■■□□□ 1.8
RAB40C-204ENST00000538492 TBK1Q9UHD2 729 aa26.31■■□□□ 1.8
RAB40C-204ENST00000538492 CEP83Q9Y592 693 aa26.31■■□□□ 1.8
RAB40C-204ENST00000538492 DICER1Q9UPY3 1922 aaKnown RBP26.31■■□□□ 1.8
RAB40C-204ENST00000538492 LRRD1A4D1F6 860 aa26.31■■□□□ 1.8
RAB40C-204ENST00000538492 TJP3O95049 919 aa26.31■■□□□ 1.8
RAB40C-204ENST00000538492 EIF4BP23588 611 aaKnown RBP26.31■■□□□ 1.8
RAB40C-204ENST00000538492 CNGA2Q16280 664 aa26.31■■□□□ 1.8
RAB40C-204ENST00000538492 PPP1R15BQ5SWA1 713 aa26.31■■□□□ 1.8
RAB40C-204ENST00000538492 LRRC34Q8IZ02 419 aa26.31■■□□□ 1.8
RAB40C-204ENST00000538492 AGTPBP1Q9UPW5 1226 aa26.31■■□□□ 1.8
RAB40C-204ENST00000538492 H0YHG0 523 aa26.3■■□□□ 1.8
RAB40C-204ENST00000538492 TFDP1Q14186 410 aa26.3■■□□□ 1.8
RAB40C-204ENST00000538492 SPRED3Q2MJR0 410 aa26.3■■□□□ 1.8
RAB40C-204ENST00000538492 WDR72Q3MJ13 1102 aa26.3■■□□□ 1.8
RAB40C-204ENST00000538492 CCDC62Q6P9F0 684 aa26.3■■□□□ 1.8
RAB40C-204ENST00000538492 EXOC8Q8IYI6 725 aa26.3■■□□□ 1.8
RAB40C-204ENST00000538492 BBOF1Q8ND07 529 aa26.3■■□□□ 1.8
RAB40C-204ENST00000538492 OSBPL7Q9BZF2 842 aa26.3■■□□□ 1.8
RAB40C-204ENST00000538492 ZNF518BQ9C0D4 1074 aa26.3■■□□□ 1.8
RAB40C-204ENST00000538492 CDT1Q9H211 546 aa26.3■■□□□ 1.8
RAB40C-204ENST00000538492 RNPEPQ9H4A4 650 aa26.3■■□□□ 1.8
RAB40C-204ENST00000538492 PCDHGC3Q9UN70 934 aa26.3■■□□□ 1.8
RAB40C-204ENST00000538492 B4GALT4O60513 344 aa26.3■■□□□ 1.8
RAB40C-204ENST00000538492 FSBPO95073 299 aa26.3■■□□□ 1.8
RAB40C-204ENST00000538492 PSMC4P43686 418 aa26.3■■□□□ 1.8
RAB40C-204ENST00000538492 MBTD1Q05BQ5 628 aa26.3■■□□□ 1.8
RAB40C-204ENST00000538492 CYTH4Q9UIA0 394 aa26.3■■□□□ 1.8
RAB40C-204ENST00000538492 GOLGA6L7A0A1B0GV03 622 aa26.29■■□□□ 1.8
RAB40C-204ENST00000538492 RFC1P35251 1148 aaPredicted RBP26.29■■□□□ 1.8
RAB40C-204ENST00000538492 PIGHQ14442 188 aaPredicted RBP26.29■■□□□ 1.8
RAB40C-204ENST00000538492 PTPN20Q4JDL3 420 aa26.29■■□□□ 1.8
RAB40C-204ENST00000538492 HIBCHQ6NVY1 386 aaPredicted RBP26.29■■□□□ 1.8
RAB40C-204ENST00000538492 RBM15Q96T37 977 aaKnown RBP eCLIP26.29■■□□□ 1.81e-6■■■■■ 29.9
RAB40C-204ENST00000538492 SMARCAD1Q9H4L7 1026 aa26.29■■□□□ 1.8
RAB40C-204ENST00000538492 DNAJC25-GNG10A0A024R161 153 aa26.29■■□□□ 1.8
RAB40C-204ENST00000538492 NFICP08651 508 aa26.29■■□□□ 1.8
RAB40C-204ENST00000538492 VIMP08670 466 aaKnown RBP26.29■■□□□ 1.8
RAB40C-204ENST00000538492 GJC2Q5T442 439 aaPredicted RBP26.29■■□□□ 1.8
RAB40C-204ENST00000538492 CYP4F22Q6NT55 531 aa26.29■■□□□ 1.8
RAB40C-204ENST00000538492 RPF1Q9H9Y2 349 aaKnown RBP26.29■■□□□ 1.8
RAB40C-204ENST00000538492 MLXIPLQ9NP71 852 aa26.29■■□□□ 1.8
RAB40C-204ENST00000538492 TMEM120BA0PK00 339 aa26.28■■□□□ 1.8
RAB40C-204ENST00000538492 CETPP11597 493 aa26.28■■□□□ 1.8
RAB40C-204ENST00000538492 CDH5P33151 784 aaPredicted RBP26.28■■□□□ 1.8
RAB40C-204ENST00000538492 ARSEP51690 589 aa26.28■■□□□ 1.8
RAB40C-204ENST00000538492 SMTNL2Q2TAL5 461 aa26.28■■□□□ 1.8
RAB40C-204ENST00000538492 LRRC38Q5VT99 294 aa26.28■■□□□ 1.8
RAB40C-204ENST00000538492 ANKRD13AQ8IZ07 590 aa26.28■■□□□ 1.8
RAB40C-204ENST00000538492 SIX4Q9UIU6 781 aa26.28■■□□□ 1.8
RAB40C-204ENST00000538492 LMNB2Q03252 620 aa26.28■■□□□ 1.8
RAB40C-204ENST00000538492 TFDP3Q5H9I0 405 aa26.28■■□□□ 1.8
RAB40C-204ENST00000538492 CYP4X1Q8N118 509 aa26.28■■□□□ 1.8
RAB40C-204ENST00000538492 JOSD2Q8TAC2 188 aa26.28■■□□□ 1.8
RAB40C-204ENST00000538492 DYDC1Q8WWB3 177 aa26.28■■□□□ 1.8
RAB40C-204ENST00000538492 KCNK9Q9NPC2 374 aa26.28■■□□□ 1.8
RAB40C-204ENST00000538492 hCG_1818297A0A087WSY0 165 aa26.27■■□□□ 1.8
RAB40C-204ENST00000538492 GPR25O00155 361 aa26.27■■□□□ 1.8
RAB40C-204ENST00000538492 CXCL11O14625 94 aa26.27■■□□□ 1.8
RAB40C-204ENST00000538492 ATP2C2O75185 946 aa26.27■■□□□ 1.8
RAB40C-204ENST00000538492 PLCB3Q01970 1234 aa26.27■■□□□ 1.8
RAB40C-204ENST00000538492 EAPPQ56P03 285 aaPredicted RBP26.27■■□□□ 1.8
RAB40C-204ENST00000538492 HP1BP3Q5SSJ5 553 aaPredicted RBP26.27■■□□□ 1.8
RAB40C-204ENST00000538492 ZWILCHQ9H900 591 aa26.27■■□□□ 1.8
RAB40C-204ENST00000538492 SPDYE5A6NIY4 337 aa26.27■■□□□ 1.8
RAB40C-204ENST00000538492 HBP1O60381 514 aa26.27■■□□□ 1.8
RAB40C-204ENST00000538492 ITGBL1O95965 494 aaPredicted RBP26.27■■□□□ 1.8
RAB40C-204ENST00000538492 PSMA2P25787 234 aa26.27■■□□□ 1.8
RAB40C-204ENST00000538492 ADCY1Q08828 1119 aa26.27■■□□□ 1.8
RAB40C-204ENST00000538492 ZNF667Q5HYK9 610 aa26.27■■□□□ 1.8
RAB40C-204ENST00000538492 KCNT1Q5JUK3 1230 aa26.27■■□□□ 1.8
RAB40C-204ENST00000538492 VSTM1Q6UX27 236 aa26.27■■□□□ 1.8
RAB40C-204ENST00000538492 TAX1BP1Q86VP1 789 aa26.27■■□□□ 1.8
RAB40C-204ENST00000538492 ANKRD42Q8N9B4 389 aa26.27■■□□□ 1.8
RAB40C-204ENST00000538492 C1orf127Q8N9H9 656 aa26.27■■□□□ 1.8
RAB40C-204ENST00000538492 SAE1Q9UBE0 346 aaPredicted RBP26.27■■□□□ 1.8
RAB40C-204ENST00000538492 KRT3P12035 628 aa26.26■■□□□ 1.79
RAB40C-204ENST00000538492 CDKN2BP42772 138 aa26.26■■□□□ 1.79
RAB40C-204ENST00000538492 DYNLT1P63172 113 aa26.26■■□□□ 1.79
RAB40C-204ENST00000538492 TAP1Q03518 808 aa26.26■■□□□ 1.79
RAB40C-204ENST00000538492 ACTN3Q08043 901 aaPredicted RBP26.26■■□□□ 1.79
RAB40C-204ENST00000538492 GPS1Q13098 491 aa26.26■■□□□ 1.79
RAB40C-204ENST00000538492 CCDC13Q8IYE1 715 aa26.26■■□□□ 1.79
RAB40C-204ENST00000538492 ZCCHC9Q8N567 271 aaKnown RBP26.26■■□□□ 1.79
RAB40C-204ENST00000538492 ALLCQ8N6M5 410 aa26.26■■□□□ 1.79
RAB40C-204ENST00000538492 TMEM121Q9BTD3 319 aa26.26■■□□□ 1.79
RAB40C-204ENST00000538492 SDCBP2Q9H190 292 aa26.26■■□□□ 1.79
RAB40C-204ENST00000538492 HMGXB4Q9UGU5 601 aa26.26■■□□□ 1.79
RAB40C-204ENST00000538492 MAGEA4P43358 317 aa26.26■■□□□ 1.79
RAB40C-204ENST00000538492 EMC1Q8N766 993 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms