RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 LARGE1O95461 756 aa12.12□□□□□ -0.47
CLPB-208ENST00000538021 GJA4P35212 333 aa12.12□□□□□ -0.47
CLPB-208ENST00000538021 MYBPC2Q14324 1141 aa12.12□□□□□ -0.47
CLPB-208ENST00000538021 COL28A1Q2UY09 1125 aa12.12□□□□□ -0.47
CLPB-208ENST00000538021 SLC10A6Q3KNW5 377 aa12.12□□□□□ -0.47
CLPB-208ENST00000538021 MPZL3Q6UWV2 235 aa12.12□□□□□ -0.47
CLPB-208ENST00000538021 ARMCX6Q7L4S7 300 aa12.12□□□□□ -0.47
CLPB-208ENST00000538021 MAB21L3Q8N8X9 362 aa12.12□□□□□ -0.47
CLPB-208ENST00000538021 ERMNQ8TAM6 284 aa12.12□□□□□ -0.47
CLPB-208ENST00000538021 GIPC2Q8TF65 315 aa12.12□□□□□ -0.47
CLPB-208ENST00000538021 USP13Q92995 863 aaPredicted RBP12.12□□□□□ -0.47
CLPB-208ENST00000538021 CD101Q93033 1021 aa12.12□□□□□ -0.47
CLPB-208ENST00000538021 TNFRSF25Q93038 417 aa12.12□□□□□ -0.47
CLPB-208ENST00000538021 ZBTB45Q96K62 511 aaPredicted RBP12.12□□□□□ -0.47
CLPB-208ENST00000538021 YTHDC1Q96MU7 727 aaKnown RBP12.12□□□□□ -0.47
CLPB-208ENST00000538021 ZSWIM6Q9HCJ5 1215 aa12.12□□□□□ -0.47
CLPB-208ENST00000538021 ANKFY1Q9P2R3 1169 aa12.12□□□□□ -0.47
CLPB-208ENST00000538021 ENGP17813 658 aa12.11□□□□□ -0.47
CLPB-208ENST00000538021 ATF6P18850 670 aa12.11□□□□□ -0.47
CLPB-208ENST00000538021 PROZP22891 400 aa12.11□□□□□ -0.47
CLPB-208ENST00000538021 RPA1P27694 616 aa12.11□□□□□ -0.47
CLPB-208ENST00000538021 NMT1P30419 496 aaKnown RBP12.11□□□□□ -0.47
CLPB-208ENST00000538021 NPTX2P47972 431 aa12.11□□□□□ -0.47
CLPB-208ENST00000538021 TUFMP49411 452 aaKnown RBP12.11□□□□□ -0.47
CLPB-208ENST00000538021 ATXN3P54252 364 aaPredicted RBP12.11□□□□□ -0.47
CLPB-208ENST00000538021 SCAPQ12770 1279 aa12.11□□□□□ -0.47
CLPB-208ENST00000538021 DMP1Q13316 513 aaPredicted RBP12.11□□□□□ -0.47
CLPB-208ENST00000538021 SLC39A12Q504Y0 691 aa12.11□□□□□ -0.47
CLPB-208ENST00000538021 HDDC3Q8N4P3 179 aa12.11□□□□□ -0.47
CLPB-208ENST00000538021 CPA6Q8N4T0 437 aa12.11□□□□□ -0.47
CLPB-208ENST00000538021 EZH1Q92800 747 aaPredicted RBP12.11□□□□□ -0.47
CLPB-208ENST00000538021 BHMT2Q9H2M3 363 aa12.11□□□□□ -0.47
CLPB-208ENST00000538021 TMEM134Q9H6X4 195 aa12.11□□□□□ -0.47
CLPB-208ENST00000538021 ECT2Q9H8V3 914 aa12.11□□□□□ -0.47
CLPB-208ENST00000538021 TDP1Q9NUW8 608 aa12.11□□□□□ -0.47
CLPB-208ENST00000538021 ORC3Q9UBD5 711 aaPredicted RBP12.11□□□□□ -0.47
CLPB-208ENST00000538021 EVLQ9UI08 416 aaPredicted RBP12.11□□□□□ -0.47
CLPB-208ENST00000538021 TBX20Q9UMR3 447 aa12.11□□□□□ -0.47
CLPB-208ENST00000538021 CACNA1EQ15878 2313 aa12.11□□□□□ -0.47
CLPB-208ENST00000538021 PCNX2A6NKB5 2137 aa12.11□□□□□ -0.47
CLPB-208ENST00000538021 BPTFQ12830 3046 aa12.1□□□□□ -0.47
CLPB-208ENST00000538021 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.1□□□□□ -0.47
CLPB-208ENST00000538021 BTBD18B2RXH4 712 aa12.1□□□□□ -0.47
CLPB-208ENST00000538021 ABLIM1O14639 778 aa12.1□□□□□ -0.47
CLPB-208ENST00000538021 MAP3K13O43283 966 aa12.1□□□□□ -0.47
CLPB-208ENST00000538021 CXCL8P10145 99 aa12.1□□□□□ -0.47
CLPB-208ENST00000538021 MCM7P33993 719 aa12.1□□□□□ -0.47
CLPB-208ENST00000538021 AARSP49588 968 aaKnown RBP eCLIP12.1□□□□□ -0.47
CLPB-208ENST00000538021 GUCY2FP51841 1108 aa12.1□□□□□ -0.47
CLPB-208ENST00000538021 SEC13P55735 322 aa12.1□□□□□ -0.47
CLPB-208ENST00000538021 SEMA3BQ13214 749 aa12.1□□□□□ -0.47
CLPB-208ENST00000538021 PDGFRLQ15198 375 aa12.1□□□□□ -0.47
CLPB-208ENST00000538021 C2orf27AQ580R0 203 aa12.1□□□□□ -0.47
CLPB-208ENST00000538021 LPCAT2Q7L5N7 544 aa12.1□□□□□ -0.47
CLPB-208ENST00000538021 TAS1R3Q7RTX0 852 aa12.1□□□□□ -0.47
CLPB-208ENST00000538021 TMEFF1Q8IYR6 380 aa12.1□□□□□ -0.47
CLPB-208ENST00000538021 MDGA1Q8NFP4 955 aa12.1□□□□□ -0.47
CLPB-208ENST00000538021 RIN3Q8TB24 985 aa12.1□□□□□ -0.47
CLPB-208ENST00000538021 RLN3Q8WXF3 142 aa12.1□□□□□ -0.47
CLPB-208ENST00000538021 WASF1Q92558 559 aa12.1□□□□□ -0.47
CLPB-208ENST00000538021 CNOT6LQ96LI5 555 aaKnown RBP12.1□□□□□ -0.47
CLPB-208ENST00000538021 GTPBP2Q9BX10 602 aaKnown RBP12.1□□□□□ -0.47
CLPB-208ENST00000538021 KIF9Q9HAQ2 790 aa12.1□□□□□ -0.47
CLPB-208ENST00000538021 KMT5AQ9NQR1 393 aa12.1□□□□□ -0.47
CLPB-208ENST00000538021 TMEM74BQ9NUR3 256 aa12.1□□□□□ -0.47
CLPB-208ENST00000538021 HSFX1Q9UBD0 423 aa12.1□□□□□ -0.47
CLPB-208ENST00000538021 ZMYM5Q9UJ78 669 aa12.1□□□□□ -0.47
CLPB-208ENST00000538021 FLNBO75369 2602 aaKnown RBP12.09□□□□□ -0.47
CLPB-208ENST00000538021 ZNF638Q14966 1978 aaKnown RBP12.09□□□□□ -0.47
CLPB-208ENST00000538021 FAM221BA6H8Z2 402 aa12.09□□□□□ -0.47
CLPB-208ENST00000538021 CFIP05156 583 aa12.09□□□□□ -0.47
CLPB-208ENST00000538021 ODC1P11926 461 aa12.09□□□□□ -0.47
CLPB-208ENST00000538021 TYMPP19971 482 aa12.09□□□□□ -0.47
CLPB-208ENST00000538021 DDX6P26196 483 aaKnown RBP eCLIP12.09□□□□□ -0.47
CLPB-208ENST00000538021 LRPAP1P30533 357 aa12.09□□□□□ -0.47
CLPB-208ENST00000538021 PTGER3P43115 390 aa12.09□□□□□ -0.47
CLPB-208ENST00000538021 MATR3P43243 847 aaKnown RBP eCLIP12.09□□□□□ -0.47
CLPB-208ENST00000538021 IFNAR2P48551 515 aa12.09□□□□□ -0.47
CLPB-208ENST00000538021 FOSBP53539 338 aa12.09□□□□□ -0.47
CLPB-208ENST00000538021 FAM193AP78312 1265 aa12.09□□□□□ -0.47
CLPB-208ENST00000538021 MTF1Q14872 753 aa12.09□□□□□ -0.47
CLPB-208ENST00000538021 NOLC1Q14978 699 aaKnown RBP eCLIP12.09□□□□□ -0.47
CLPB-208ENST00000538021 HAUS3Q68CZ6 603 aa12.09□□□□□ -0.47
CLPB-208ENST00000538021 TXNDC8Q6A555 127 aa12.09□□□□□ -0.47
CLPB-208ENST00000538021 PIP4P1Q86T03 277 aa12.09□□□□□ -0.47
CLPB-208ENST00000538021 RASSF3Q86WH2 238 aa12.09□□□□□ -0.47
CLPB-208ENST00000538021 CCDC33Q8N5R6 958 aa12.09□□□□□ -0.47
CLPB-208ENST00000538021 OR10T2Q8NGX3 314 aa12.09□□□□□ -0.47
CLPB-208ENST00000538021 CCDC26Q8TAB7 109 aa12.09□□□□□ -0.47
CLPB-208ENST00000538021 HNRNPLLQ8WVV9 542 aaKnown RBP12.09□□□□□ -0.47
CLPB-208ENST00000538021 FSCN3Q9NQT6 498 aa12.09□□□□□ -0.47
CLPB-208ENST00000538021 PDRG1Q9NUG6 133 aa12.09□□□□□ -0.47
CLPB-208ENST00000538021 DUS2Q9NX74 493 aaKnown RBP12.09□□□□□ -0.47
CLPB-208ENST00000538021 ARHGAP28Q9P2N2 729 aa12.09□□□□□ -0.47
CLPB-208ENST00000538021 MBD1Q9UIS9 605 aaPredicted RBP12.09□□□□□ -0.47
CLPB-208ENST00000538021 UBQLN1Q9UMX0 589 aaKnown RBP12.09□□□□□ -0.47
CLPB-208ENST00000538021 ATXN2Q99700 1313 aaKnown RBP12.09□□□□□ -0.47
CLPB-208ENST00000538021 IGSF10Q6WRI0 2623 aa12.08□□□□□ -0.47
CLPB-208ENST00000538021 TNFRSF10BO14763 440 aa12.08□□□□□ -0.48
CLPB-208ENST00000538021 HIP1RO75146 1068 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms