RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 STXBP5LQ9Y2K9 1186 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 DNAH12Q6ZR08 3092 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 COL4A6Q14031 1691 aa13.13□□□□□ -0.31
DDB1-209ENST00000537877 TBKBP1A7MCY6 615 aa13.12□□□□□ -0.31
DDB1-209ENST00000537877 TMCO5BA8MYB1 307 aa13.12□□□□□ -0.31
DDB1-209ENST00000537877 O00370 1275 aa13.12□□□□□ -0.31
DDB1-209ENST00000537877 DGKIO75912 1065 aa13.12□□□□□ -0.31
DDB1-209ENST00000537877 FTLP02792 175 aaPredicted RBP13.12□□□□□ -0.31
DDB1-209ENST00000537877 TYMPP19971 482 aa13.12□□□□□ -0.31
DDB1-209ENST00000537877 NSFP46459 744 aaKnown RBP13.12□□□□□ -0.31
DDB1-209ENST00000537877 OR1G1P47890 313 aa13.12□□□□□ -0.31
DDB1-209ENST00000537877 GATMP50440 423 aa13.12□□□□□ -0.31
DDB1-209ENST00000537877 GALCP54803 685 aa13.12□□□□□ -0.31
DDB1-209ENST00000537877 ETF1P62495 437 aaKnown RBP13.12□□□□□ -0.31
DDB1-209ENST00000537877 FPGSQ05932 587 aa13.12□□□□□ -0.31
DDB1-209ENST00000537877 CNGA2Q16280 664 aa13.12□□□□□ -0.31
DDB1-209ENST00000537877 WSCD1Q658N2 575 aa13.12□□□□□ -0.31
DDB1-209ENST00000537877 CD300LGQ6UXG3 332 aa13.12□□□□□ -0.31
DDB1-209ENST00000537877 METTL23Q86XA0 190 aa13.12□□□□□ -0.31
DDB1-209ENST00000537877 C7orf61Q8IZ16 206 aa13.12□□□□□ -0.31
DDB1-209ENST00000537877 RNF10Q8N5U6 811 aaKnown RBP13.12□□□□□ -0.31
DDB1-209ENST00000537877 TMEM35BQ8NCS4 154 aa13.12□□□□□ -0.31
DDB1-209ENST00000537877 SECISBP2LQ93073 1101 aaKnown RBP13.12□□□□□ -0.31
DDB1-209ENST00000537877 TOP1MTQ969P6 601 aa13.12□□□□□ -0.31
DDB1-209ENST00000537877 HEXIM2Q96MH2 286 aaKnown RBP13.12□□□□□ -0.31
DDB1-209ENST00000537877 ZSWIM1Q9BR11 485 aa13.12□□□□□ -0.31
DDB1-209ENST00000537877 LHX5Q9H2C1 402 aa13.12□□□□□ -0.31
DDB1-209ENST00000537877 RRAGDQ9NQL2 400 aaPredicted RBP13.12□□□□□ -0.31
DDB1-209ENST00000537877 TAS2R14Q9NYV8 317 aa13.12□□□□□ -0.31
DDB1-209ENST00000537877 TRIM10Q9UDY6 481 aa13.12□□□□□ -0.31
DDB1-209ENST00000537877 GUCA1BQ9UMX6 200 aa13.12□□□□□ -0.31
DDB1-209ENST00000537877 PCDHB8Q9UN66 801 aa13.12□□□□□ -0.31
DDB1-209ENST00000537877 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.12□□□□□ -0.31
DDB1-209ENST00000537877 NME7Q9Y5B8 376 aa13.12□□□□□ -0.31
DDB1-209ENST00000537877 BRCA2P51587 3418 aa13.12□□□□□ -0.31
DDB1-209ENST00000537877 CARNS1A5YM72 827 aa13.11□□□□□ -0.31
DDB1-209ENST00000537877 TRAPPC3O43617 180 aa13.11□□□□□ -0.31
DDB1-209ENST00000537877 CAPN15O75808 1086 aa13.11□□□□□ -0.31
DDB1-209ENST00000537877 MYBL1P10243 752 aa13.11□□□□□ -0.31
DDB1-209ENST00000537877 TNNT1P13805 278 aa13.11□□□□□ -0.31
DDB1-209ENST00000537877 PCSK1P29120 753 aa13.11□□□□□ -0.31
DDB1-209ENST00000537877 ORC1Q13415 861 aa13.11□□□□□ -0.31
DDB1-209ENST00000537877 IFI16Q16666 785 aaKnown RBP13.11□□□□□ -0.31
DDB1-209ENST00000537877 NAA35Q5VZE5 725 aa13.11□□□□□ -0.31
DDB1-209ENST00000537877 ARHGAP17Q68EM7 881 aa13.11□□□□□ -0.31
DDB1-209ENST00000537877 PSRC1Q6PGN9 363 aaPredicted RBP13.11□□□□□ -0.31
DDB1-209ENST00000537877 LCLAT1Q6UWP7 414 aa13.11□□□□□ -0.31
DDB1-209ENST00000537877 ACOT1Q86TX2 421 aa13.11□□□□□ -0.31
DDB1-209ENST00000537877 OSTM1Q86WC4 334 aa13.11□□□□□ -0.31
DDB1-209ENST00000537877 PHF13Q86YI8 300 aaPredicted RBP13.11□□□□□ -0.31
DDB1-209ENST00000537877 RFFLQ8WZ73 363 aa13.11□□□□□ -0.31
DDB1-209ENST00000537877 RABGGTAQ92696 567 aa13.11□□□□□ -0.31
DDB1-209ENST00000537877 CYFIP2Q96F07 1278 aa13.11□□□□□ -0.31
DDB1-209ENST00000537877 VCPIP1Q96JH7 1222 aa13.11□□□□□ -0.31
DDB1-209ENST00000537877 CALR3Q96L12 384 aaKnown RBP13.11□□□□□ -0.31
DDB1-209ENST00000537877 COLEC11Q9BWP8 271 aa13.11□□□□□ -0.31
DDB1-209ENST00000537877 DNAJB4Q9UDY4 337 aa13.11□□□□□ -0.31
DDB1-209ENST00000537877 GTF3C4Q9UKN8 822 aa13.11□□□□□ -0.31
DDB1-209ENST00000537877 TFR2Q9UP52 801 aa13.11□□□□□ -0.31
DDB1-209ENST00000537877 MACROD2A1Z1Q3 448 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 NRP1O14786 923 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 MICAL2O94851 1124 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 UPP2O95045 317 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 ABL1P00519 1130 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 CFHP08603 1231 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 ACRP10323 421 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 ABCB4P21439 1286 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 IGFBP6P24592 240 aaPredicted RBP13.1□□□□□ -0.31
DDB1-209ENST00000537877 BRCC3P46736 316 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 GNG11P61952 73 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 GPC5P78333 572 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 DEFB103AP81534 67 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 C1QBPQ07021 282 aaKnown RBP13.1□□□□□ -0.31
DDB1-209ENST00000537877 ELAVL2Q12926 359 aaKnown RBP13.1□□□□□ -0.31
DDB1-209ENST00000537877 TCEAL1Q15170 157 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 PAN2Q504Q3 1202 aaKnown RBP13.1□□□□□ -0.31
DDB1-209ENST00000537877 MON1BQ7L1V2 547 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 PASD1Q8IV76 773 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 RHOT2Q8IXI1 618 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 CMTR2Q8IYT2 770 aaKnown RBP13.1□□□□□ -0.31
DDB1-209ENST00000537877 B3GALNT2Q8NCR0 500 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 MSANTD4Q8NCY6 345 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 TRIM58Q8NG06 486 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 HASPINQ8TF76 798 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 BADQ92934 168 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 ZNF689Q96CS4 500 aaPredicted RBP13.1□□□□□ -0.31
DDB1-209ENST00000537877 NOX5Q96PH1 765 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 ALS2CR12Q96Q35 445 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 RC3H2Q9HBD1 1191 aaKnown RBP13.1□□□□□ -0.31
DDB1-209ENST00000537877 AVENQ9NQS1 362 aaPredicted RBP13.1□□□□□ -0.31
DDB1-209ENST00000537877 DDX43Q9NXZ2 648 aaKnown RBP13.1□□□□□ -0.31
DDB1-209ENST00000537877 ADAM28Q9UKQ2 775 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 TSPAN16Q9UKR8 245 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 CDH9Q9ULB4 789 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 FAN1Q9Y2M0 1017 aa13.1□□□□□ -0.31
DDB1-209ENST00000537877 PRG3Q9Y2Y8 225 aaPredicted RBP13.1□□□□□ -0.31
DDB1-209ENST00000537877 SF3B1O75533 1304 aaKnown RBP eCLIP13.1□□□□□ -0.31
DDB1-209ENST00000537877 PTPRSQ13332 1948 aa13.09□□□□□ -0.31
DDB1-209ENST00000537877 M0QYV0 167 aa13.09□□□□□ -0.31
DDB1-209ENST00000537877 SYN3O14994 580 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms