RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 CYP11A1P05108 521 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 FAM228BP0C875 321 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 CD19P15391 556 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 PDE6CP51160 858 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 KIF11P52732 1056 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 FMO1Q01740 532 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 MAPK8IP2Q13387 824 aaPredicted RBP16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 CEP57Q86XR8 500 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 PASD1Q8IV76 773 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 SLC39A11Q8N1S5 342 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 C17orf53Q8N3J3 647 aaPredicted RBP16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 FIBCD1Q8N539 461 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 ACRBPQ8NEB7 543 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 SP7Q8TDD2 431 aaPredicted RBP16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 ATRIPQ8WXE1 791 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 IGSF21Q96ID5 467 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 HEXIM2Q96MH2 286 aaKnown RBP16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 TMEM209Q96SK2 561 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 AGPAT1Q99943 283 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 NT5C1AQ9BXI3 368 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 MTIF3Q9H2K0 278 aaKnown RBP16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 FAM49BQ9NUQ9 324 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 ADAMTS1Q9UHI8 967 aa16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 REXO2Q9Y3B8 237 aaKnown RBP16.68■□□□□ 0.26
SFSWAP-206ENST00000537582 EFEMP2O95967 443 aa16.67■□□□□ 0.26
SFSWAP-206ENST00000537582 CYP27A1Q02318 531 aa16.67■□□□□ 0.26
SFSWAP-206ENST00000537582 RTP2Q5QGT7 225 aa16.67■□□□□ 0.26
SFSWAP-206ENST00000537582 OR10T2Q8NGX3 314 aa16.67■□□□□ 0.26
SFSWAP-206ENST00000537582 CCDC42Q96M95 316 aa16.67■□□□□ 0.26
SFSWAP-206ENST00000537582 SEPT11Q9NVA2 429 aaKnown RBP16.67■□□□□ 0.26
SFSWAP-206ENST00000537582 TAS2R14Q9NYV8 317 aa16.67■□□□□ 0.26
SFSWAP-206ENST00000537582 TFR2Q9UP52 801 aa16.67■□□□□ 0.26
SFSWAP-206ENST00000537582 SF3B1O75533 1304 aaKnown RBP eCLIP16.66■□□□□ 0.26
SFSWAP-206ENST00000537582 SSU72P8A0A1W2PR75 194 aa16.66■□□□□ 0.26
SFSWAP-206ENST00000537582 ARHGAP6O43182 974 aa16.66■□□□□ 0.26
SFSWAP-206ENST00000537582 LAG3P18627 525 aa16.66■□□□□ 0.26
SFSWAP-206ENST00000537582 CDR2Q01850 454 aa16.66■□□□□ 0.26
SFSWAP-206ENST00000537582 OVOS1Q6IE37 1185 aa16.66■□□□□ 0.26
SFSWAP-206ENST00000537582 UNC93AQ86WB7 457 aa16.66■□□□□ 0.26
SFSWAP-206ENST00000537582 TMEM86AQ8N2M4 240 aa16.66■□□□□ 0.26
SFSWAP-206ENST00000537582 SLC30A5Q8TAD4 765 aa16.66■□□□□ 0.26
SFSWAP-206ENST00000537582 ZNF606Q8WXB4 792 aa16.66■□□□□ 0.26
SFSWAP-206ENST00000537582 DEF6Q9H4E7 631 aa16.66■□□□□ 0.26
SFSWAP-206ENST00000537582 CRTAC1Q9NQ79 661 aa16.66■□□□□ 0.26
SFSWAP-206ENST00000537582 BZW2Q9Y6E2 419 aaKnown RBP16.66■□□□□ 0.26
SFSWAP-206ENST00000537582 EPN1Q9Y6I3 576 aaPredicted RBP16.66■□□□□ 0.26
SFSWAP-206ENST00000537582 VWA8A3KMH1 1905 aa16.65■□□□□ 0.26
SFSWAP-206ENST00000537582 AKR1B10O60218 316 aa16.65■□□□□ 0.26
SFSWAP-206ENST00000537582 NDUFA10O95299 355 aa16.65■□□□□ 0.26
SFSWAP-206ENST00000537582 PAEPP09466 180 aa16.65■□□□□ 0.26
SFSWAP-206ENST00000537582 OR4Q2P0C623 313 aa16.65■□□□□ 0.26
SFSWAP-206ENST00000537582 CCDC172P0C7W6 258 aa16.65■□□□□ 0.26
SFSWAP-206ENST00000537582 CCDC130P13994 396 aa16.65■□□□□ 0.26
SFSWAP-206ENST00000537582 TYMPP19971 482 aa16.65■□□□□ 0.26
SFSWAP-206ENST00000537582 FGFR3P22607 806 aa16.65■□□□□ 0.26
SFSWAP-206ENST00000537582 PBX2P40425 430 aa16.65■□□□□ 0.26
SFSWAP-206ENST00000537582 YWHAHQ04917 246 aaPredicted RBP16.65■□□□□ 0.26
SFSWAP-206ENST00000537582 HS1BP3Q53T59 392 aa16.65■□□□□ 0.26
SFSWAP-206ENST00000537582 VARS2Q5ST30 1063 aaKnown RBP16.65■□□□□ 0.26
SFSWAP-206ENST00000537582 DENND1BQ6P3S1 775 aa16.65■□□□□ 0.26
SFSWAP-206ENST00000537582 METTL23Q86XA0 190 aa16.65■□□□□ 0.26
SFSWAP-206ENST00000537582 MYBPHLA2RUH7 354 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 LINC01553A4QN01 128 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 TMCO5BA8MYB1 307 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 O00370 1275 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 TRAPPC3O43617 180 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 TNFAIP3P21580 790 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 PAX3P23760 479 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 BPIFB4P59827 614 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 MDH1BQ5I0G3 518 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 PPP1R26Q5T8A7 1209 aaPredicted RBP16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 PRSS55Q6UWB4 352 aaPredicted RBP16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 FMNL3Q8IVF7 1028 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 RNF168Q8IYW5 571 aaPredicted RBP16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 CRYBG2Q8N1P7 616 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 TTC39CQ8N584 583 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 B3GALNT2Q8NCR0 500 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 CLP1Q92989 425 aaKnown RBP16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 SYT15Q9BQS2 421 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 TMLHEQ9NVH6 421 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 SPG21Q9NZD8 308 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 DSEQ9UL01 958 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 NENFQ9UMX5 172 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 YBX2Q9Y2T7 364 aaKnown RBP16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 LAMA3Q16787 3333 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 ESPNB1AK53 854 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 CLDN5O00501 218 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 MICAL2O94851 1124 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 CA3P07451 260 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 PTPN1P18031 435 aaKnown RBP16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 LHX1P48742 406 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 SLC18A3Q16572 532 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 GOLGA7BQ2TAP0 167 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 RSPO2Q6UXX9 243 aaPredicted RBP16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 LRRTM3Q86VH5 581 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 CCDC170Q8IYT3 715 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 CYFIP2Q96F07 1278 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 TMEM169Q96HH4 297 aa16.64■□□□□ 0.25
SFSWAP-206ENST00000537582 C17orf80Q9BSJ5 609 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms