RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 ZDHHC14Q8IZN3 488 aa14.36□□□□□ -0.11
SMG6-203ENST00000536871 CEP120Q8N960 986 aa14.36□□□□□ -0.11
SMG6-203ENST00000536871 SNF8Q96H20 258 aa14.36□□□□□ -0.11
SMG6-203ENST00000536871 TMEM176AQ96HP8 235 aa14.36□□□□□ -0.11
SMG6-203ENST00000536871 HPDLQ96IR7 371 aa14.36□□□□□ -0.11
SMG6-203ENST00000536871 TMEM109Q9BVC6 243 aa14.36□□□□□ -0.11
SMG6-203ENST00000536871 BARX2Q9UMQ3 279 aaPredicted RBP14.36□□□□□ -0.11
SMG6-203ENST00000536871 F2P00734 622 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 CALCAP01258 141 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 VTNP04004 478 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 CFHP08603 1231 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 RPL21P46778 160 aaKnown RBP14.35□□□□□ -0.11
SMG6-203ENST00000536871 YARSP54577 528 aaKnown RBP14.35□□□□□ -0.11
SMG6-203ENST00000536871 RAD23BP54727 409 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 NFX1Q12986 1120 aaKnown RBP14.35□□□□□ -0.11
SMG6-203ENST00000536871 MAP2K5Q13163 448 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 FBXO25Q8TCJ0 367 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 NCAPGQ9BPX3 1015 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 KATNAL1Q9BW62 490 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 ATP8A1Q9Y2Q0 1164 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 MANSC4A6NHS7 340 aaPredicted RBP14.35□□□□□ -0.11
SMG6-203ENST00000536871 CELF2O95319 508 aaKnown RBP14.35□□□□□ -0.11
SMG6-203ENST00000536871 RALAP11233 206 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 ATF7P17544 494 aaPredicted RBP14.35□□□□□ -0.11
SMG6-203ENST00000536871 SSR1P43307 286 aaKnown RBP14.35□□□□□ -0.11
SMG6-203ENST00000536871 GABRB2P47870 512 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 CPT1AP50416 773 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 KRT17Q04695 432 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 ADCY2Q08462 1091 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 MORN1Q5T089 497 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 MARCH8Q5T0T0 291 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 GJC2Q5T442 439 aaPredicted RBP14.35□□□□□ -0.11
SMG6-203ENST00000536871 NOTUMQ6P988 496 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 SLC27A1Q6PCB7 646 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 SCARA5Q6ZMJ2 495 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 ZNF365Q70YC5 407 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 CXorf38Q8TB03 319 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 MCEEQ96PE7 176 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 TRAIPQ9BWF2 469 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 ROPN1BQ9BZX4 212 aaPredicted RBP14.35□□□□□ -0.11
SMG6-203ENST00000536871 TRIM7Q9C029 511 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 CNOT10Q9H9A5 744 aaKnown RBP14.35□□□□□ -0.11
SMG6-203ENST00000536871 ROPN1Q9HAT0 212 aaPredicted RBP14.35□□□□□ -0.11
SMG6-203ENST00000536871 DPP3Q9NY33 737 aa14.35□□□□□ -0.11
SMG6-203ENST00000536871 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.34□□□□□ -0.11
SMG6-203ENST00000536871 MBLAC1A4D2B0 266 aaPredicted RBP14.34□□□□□ -0.11
SMG6-203ENST00000536871 EIF3HO15372 352 aaKnown RBP eCLIP14.34□□□□□ -0.11
SMG6-203ENST00000536871 XPOTO43592 962 aaKnown RBP14.34□□□□□ -0.11
SMG6-203ENST00000536871 KRT3P12035 628 aa14.34□□□□□ -0.11
SMG6-203ENST00000536871 ATF2P15336 505 aa14.34□□□□□ -0.11
SMG6-203ENST00000536871 DESP17661 470 aa14.34□□□□□ -0.11
SMG6-203ENST00000536871 RDXP35241 583 aaKnown RBP14.34□□□□□ -0.11
SMG6-203ENST00000536871 IRAK1P51617 712 aa14.34□□□□□ -0.11
SMG6-203ENST00000536871 TAS2R40P59535 323 aa14.34□□□□□ -0.11
SMG6-203ENST00000536871 BYSLQ13895 437 aaKnown RBP14.34□□□□□ -0.11
SMG6-203ENST00000536871 ZNF394Q53GI3 561 aa14.34□□□□□ -0.11
SMG6-203ENST00000536871 C6orf118Q5T5N4 469 aa14.34□□□□□ -0.11
SMG6-203ENST00000536871 LRRC52Q8N7C0 313 aa14.34□□□□□ -0.11
SMG6-203ENST00000536871 TTC13Q8NBP0 860 aa14.34□□□□□ -0.11
SMG6-203ENST00000536871 TFAP2BQ92481 460 aa14.34□□□□□ -0.11
SMG6-203ENST00000536871 PGM2Q96G03 612 aa14.34□□□□□ -0.11
SMG6-203ENST00000536871 SYNCQ9H7C4 482 aa14.34□□□□□ -0.11
SMG6-203ENST00000536871 ASIC3Q9UHC3 531 aa14.34□□□□□ -0.11
SMG6-203ENST00000536871 DRG1Q9Y295 367 aaKnown RBP14.34□□□□□ -0.11
SMG6-203ENST00000536871 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.34□□□□□ -0.11
SMG6-203ENST00000536871 TCRBV7S2A1N4TA0A589 114 aa14.33□□□□□ -0.11
SMG6-203ENST00000536871 FAM170AA1A519 330 aa14.33□□□□□ -0.11
SMG6-203ENST00000536871 SETSIPP0DME0 302 aa14.33□□□□□ -0.11
SMG6-203ENST00000536871 GNAT1P11488 350 aa14.33□□□□□ -0.11
SMG6-203ENST00000536871 INHBEP58166 350 aa14.33□□□□□ -0.11
SMG6-203ENST00000536871 KRT71Q3SY84 523 aa14.33□□□□□ -0.11
SMG6-203ENST00000536871 TFDP3Q5H9I0 405 aa14.33□□□□□ -0.11
SMG6-203ENST00000536871 OLFML2BQ68BL8 750 aa14.33□□□□□ -0.11
SMG6-203ENST00000536871 TMEM192Q8IY95 271 aa14.33□□□□□ -0.11
SMG6-203ENST00000536871 WDTC1Q8N5D0 677 aa14.33□□□□□ -0.11
SMG6-203ENST00000536871 SLC4A11Q8NBS3 891 aa14.33□□□□□ -0.11
SMG6-203ENST00000536871 BEST2Q8NFU1 509 aa14.33□□□□□ -0.11
SMG6-203ENST00000536871 CPB2Q96IY4 423 aa14.33□□□□□ -0.11
SMG6-203ENST00000536871 ZNF668Q96K58 619 aaPredicted RBP14.33□□□□□ -0.11
SMG6-203ENST00000536871 NT5C1AQ9BXI3 368 aa14.33□□□□□ -0.11
SMG6-203ENST00000536871 ADAMTS10Q9H324 1103 aa14.33□□□□□ -0.11
SMG6-203ENST00000536871 POLIQ9UNA4 740 aa14.33□□□□□ -0.11
SMG6-203ENST00000536871 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.33□□□□□ -0.11
SMG6-203ENST00000536871 AGAP1Q9UPQ3 857 aa14.33□□□□□ -0.11
SMG6-203ENST00000536871 GNEQ9Y223 722 aaKnown RBP14.33□□□□□ -0.11
SMG6-203ENST00000536871 USTQ9Y2C2 406 aa14.33□□□□□ -0.11
SMG6-203ENST00000536871 MCM3APO60318 1980 aa14.33□□□□□ -0.12
SMG6-203ENST00000536871 KRT1P04264 644 aa14.33□□□□□ -0.12
SMG6-203ENST00000536871 FLT3P36888 993 aa14.33□□□□□ -0.12
SMG6-203ENST00000536871 RPL7AP62424 266 aaKnown RBP14.33□□□□□ -0.12
SMG6-203ENST00000536871 ZFYVE27Q5T4F4 411 aa14.33□□□□□ -0.12
SMG6-203ENST00000536871 DENND1BQ6P3S1 775 aa14.33□□□□□ -0.12
SMG6-203ENST00000536871 CATSPER4Q7RTX7 472 aa14.33□□□□□ -0.12
SMG6-203ENST00000536871 CDR2LQ86X02 465 aaPredicted RBP14.33□□□□□ -0.12
SMG6-203ENST00000536871 CPNE8Q86YQ8 564 aa14.33□□□□□ -0.12
SMG6-203ENST00000536871 NME8Q8N427 588 aa14.33□□□□□ -0.12
SMG6-203ENST00000536871 NPLOC4Q8TAT6 608 aa14.33□□□□□ -0.12
SMG6-203ENST00000536871 C1orf54Q8WWF1 131 aa14.33□□□□□ -0.12
SMG6-203ENST00000536871 SOCS4Q8WXH5 440 aa14.33□□□□□ -0.12
SMG6-203ENST00000536871 KIF12Q96FN5 646 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms