RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 ZNF568Q3ZCX4 644 aa5.7□□□□□ -1.5
CHD4-205ENST00000536301 TXNDC8Q6A555 127 aa5.7□□□□□ -1.5
CHD4-205ENST00000536301 BLOC1S2Q6QNY1 142 aa5.7□□□□□ -1.5
CHD4-205ENST00000536301 PADI6Q6TGC4 694 aa5.7□□□□□ -1.5
CHD4-205ENST00000536301 RASSF3Q86WH2 238 aa5.7□□□□□ -1.5
CHD4-205ENST00000536301 TTC30AQ86WT1 665 aa5.7□□□□□ -1.5
CHD4-205ENST00000536301 CATSPER3Q86XQ3 398 aa5.7□□□□□ -1.5
CHD4-205ENST00000536301 CCDC33Q8N5R6 958 aa5.7□□□□□ -1.5
CHD4-205ENST00000536301 DEFB119Q8N690 84 aa5.7□□□□□ -1.5
CHD4-205ENST00000536301 MAB21L3Q8N8X9 362 aa5.7□□□□□ -1.5
CHD4-205ENST00000536301 TSTD1Q8NFU3 115 aa5.7□□□□□ -1.5
CHD4-205ENST00000536301 OR10T2Q8NGX3 314 aa5.7□□□□□ -1.5
CHD4-205ENST00000536301 TNFRSF25Q93038 417 aa5.7□□□□□ -1.5
CHD4-205ENST00000536301 PSMG2Q969U7 264 aa5.7□□□□□ -1.5
CHD4-205ENST00000536301 ACO2Q99798 780 aaKnown RBP5.7□□□□□ -1.5
CHD4-205ENST00000536301 P2RY13Q9BPV8 354 aa5.7□□□□□ -1.5
CHD4-205ENST00000536301 CCDC94Q9BW85 323 aaPredicted RBP5.7□□□□□ -1.5
CHD4-205ENST00000536301 TARS2Q9BW92 718 aaKnown RBP5.7□□□□□ -1.5
CHD4-205ENST00000536301 HAPLN2Q9GZV7 340 aa5.7□□□□□ -1.5
CHD4-205ENST00000536301 C2orf40Q9H1Z8 148 aa5.7□□□□□ -1.5
CHD4-205ENST00000536301 TTC12Q9H892 705 aaPredicted RBP5.7□□□□□ -1.5
CHD4-205ENST00000536301 CNTN3Q9P232 1028 aa5.7□□□□□ -1.5
CHD4-205ENST00000536301 EVLQ9UI08 416 aaPredicted RBP5.7□□□□□ -1.5
CHD4-205ENST00000536301 TBX20Q9UMR3 447 aa5.7□□□□□ -1.5
CHD4-205ENST00000536301 TNFSF13BQ9Y275 285 aa5.7□□□□□ -1.5
CHD4-205ENST00000536301 WNT6Q9Y6F9 365 aa5.7□□□□□ -1.5
CHD4-205ENST00000536301 CFAP46Q8IYW2 2715 aa5.7□□□□□ -1.5
CHD4-205ENST00000536301 COL6A6A6NMZ7 2263 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 NUMA1Q14980 2115 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 MGAQ8IWI9 3026 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 K7EQS6 105 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 M0QZQ0 153 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 SH3BP5O60239 455 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 OAZ2O95190 189 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 F11P03951 625 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 HMGB1P09429 215 aaKnown RBP5.69□□□□□ -1.5
CHD4-205ENST00000536301 HMGA1P17096 107 aaKnown RBP5.69□□□□□ -1.5
CHD4-205ENST00000536301 CYP11B2P19099 503 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 DRD1P21728 446 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 WEE1P30291 646 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 RPL9P32969 192 aaKnown RBP5.69□□□□□ -1.5
CHD4-205ENST00000536301 HSPA4P34932 840 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 P2RY2P41231 377 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 ALDH1A3P47895 512 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 AARSP49588 968 aaKnown RBP eCLIP5.69□□□□□ -1.51e-9■■■□□ 16.9
CHD4-205ENST00000536301 FOSBP53539 338 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 IRX6P78412 446 aaPredicted RBP5.69□□□□□ -1.5
CHD4-205ENST00000536301 YWHAHQ04917 246 aaPredicted RBP5.69□□□□□ -1.5
CHD4-205ENST00000536301 GPR17Q13304 367 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 KRT32Q14532 448 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 CALCRLQ16602 461 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 ZC2HC1CQ53FD0 456 aaPredicted RBP5.69□□□□□ -1.5
CHD4-205ENST00000536301 C2orf27AQ580R0 203 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 SDHAF4Q5VUM1 108 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 CCNI2Q6ZMN8 369 aaPredicted RBP5.69□□□□□ -1.5
CHD4-205ENST00000536301 SLCO6A1Q86UG4 719 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 LRRTM3Q86VH5 581 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 SLFN12Q8IYM2 578 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 TRIM22Q8IYM9 498 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 CMTM8Q8IZV2 173 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 DAW1Q8N136 415 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 TTC16Q8NEE8 873 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 MCPH1Q8NEM0 835 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 APPL2Q8NEU8 664 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 OLIG1Q8TAK6 271 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 USP33Q8TEY7 942 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 CD101Q93033 1021 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 CNOT6LQ96LI5 555 aaKnown RBP5.69□□□□□ -1.5
CHD4-205ENST00000536301 MTMR9Q96QG7 549 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 SLC22A12Q96S37 553 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 SEPT5Q99719 369 aaPredicted RBP5.69□□□□□ -1.5
CHD4-205ENST00000536301 GTPBP2Q9BX10 602 aaKnown RBP5.69□□□□□ -1.5
CHD4-205ENST00000536301 SLC32A1Q9H598 525 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 CCDC86Q9H6F5 360 aaKnown RBP5.69□□□□□ -1.5
CHD4-205ENST00000536301 ECT2Q9H8V3 914 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 TPCN1Q9ULQ1 816 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 PCDHA12Q9UN75 941 aa5.69□□□□□ -1.5
CHD4-205ENST00000536301 ARHGEF35A5YM69 484 aa5.68□□□□□ -1.5
CHD4-205ENST00000536301 OR6C75A6NL08 312 aa5.68□□□□□ -1.5
CHD4-205ENST00000536301 UPK3BL1B0FP48 263 aa5.68□□□□□ -1.5
CHD4-205ENST00000536301 UPK3BL2E5RIL1 263 aa5.68□□□□□ -1.5
CHD4-205ENST00000536301 PYCARD-AS1I3L0S3 204 aa5.68□□□□□ -1.5
CHD4-205ENST00000536301 SGK1O00141 431 aa5.68□□□□□ -1.5
CHD4-205ENST00000536301 SCAMP3O14828 347 aaKnown RBP5.68□□□□□ -1.5
CHD4-205ENST00000536301 BAG4O95429 457 aaKnown RBP5.68□□□□□ -1.5
CHD4-205ENST00000536301 CTDNEP1O95476 244 aa5.68□□□□□ -1.5
CHD4-205ENST00000536301 CFIP05156 583 aa5.68□□□□□ -1.5
CHD4-205ENST00000536301 FTH1P19P0C7X4 201 aa5.68□□□□□ -1.5
CHD4-205ENST00000536301 CXCL8P10145 99 aa5.68□□□□□ -1.5
CHD4-205ENST00000536301 XRCC6P12956 609 aaKnown RBP eCLIP5.68□□□□□ -1.5
CHD4-205ENST00000536301 PROZP22891 400 aa5.68□□□□□ -1.5
CHD4-205ENST00000536301 MARCKSP29966 332 aaPredicted RBP5.68□□□□□ -1.5
CHD4-205ENST00000536301 LRPAP1P30533 357 aa5.68□□□□□ -1.5
CHD4-205ENST00000536301 OPRD1P41143 372 aa5.68□□□□□ -1.5
CHD4-205ENST00000536301 TNFSF9P41273 254 aa5.68□□□□□ -1.5
CHD4-205ENST00000536301 YARSP54577 528 aaKnown RBP5.68□□□□□ -1.5
CHD4-205ENST00000536301 PEX3P56589 373 aa5.68□□□□□ -1.5
CHD4-205ENST00000536301 NLRP12P59046 1061 aa5.68□□□□□ -1.5
CHD4-205ENST00000536301 SCRN1Q12765 414 aa5.68□□□□□ -1.5
CHD4-205ENST00000536301 USP4Q13107 963 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms