RNA–Protein interactions for RNA: ENST00000535993.1

CCND1-202, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-202ENST00000535993 TTC9BQ8N6N2 239 aa13.14□□□□□ -0.31
CCND1-202ENST00000535993 ZBTB44Q8NCP5 570 aa13.14□□□□□ -0.31
CCND1-202ENST00000535993 SPPL2BQ8TCT7 592 aa13.14□□□□□ -0.31
CCND1-202ENST00000535993 FOXD4L4Q8WXT5 416 aaPredicted RBP13.14□□□□□ -0.31
CCND1-202ENST00000535993 NELL1Q92832 810 aa13.14□□□□□ -0.31
CCND1-202ENST00000535993 FAM213AQ9BRX8 229 aa13.14□□□□□ -0.31
CCND1-202ENST00000535993 TASP1Q9H6P5 420 aa13.14□□□□□ -0.31
CCND1-202ENST00000535993 OLFML3Q9NRN5 406 aa13.14□□□□□ -0.31
CCND1-202ENST00000535993 ZMYM5Q9UJ78 669 aa13.14□□□□□ -0.31
CCND1-202ENST00000535993 COL4A3Q01955 1670 aa13.14□□□□□ -0.31
CCND1-202ENST00000535993 CEP250Q9BV73 2442 aa13.13□□□□□ -0.31
CCND1-202ENST00000535993 ARNTLO00327 626 aa13.13□□□□□ -0.31
CCND1-202ENST00000535993 SPTLC2O15270 562 aa13.13□□□□□ -0.31
CCND1-202ENST00000535993 HAPLN1P10915 354 aaPredicted RBP13.13□□□□□ -0.31
CCND1-202ENST00000535993 CCNE1P24864 410 aa13.13□□□□□ -0.31
CCND1-202ENST00000535993 CCR3P51677 355 aa13.13□□□□□ -0.31
CCND1-202ENST00000535993 TFAMQ00059 246 aaKnown RBP13.13□□□□□ -0.31
CCND1-202ENST00000535993 PLCB2Q00722 1185 aa13.13□□□□□ -0.31
CCND1-202ENST00000535993 TSPY1Q01534 308 aa13.13□□□□□ -0.31
CCND1-202ENST00000535993 KCNA1Q09470 495 aa13.13□□□□□ -0.31
CCND1-202ENST00000535993 LRRC32Q14392 662 aa13.13□□□□□ -0.31
CCND1-202ENST00000535993 STK38Q15208 465 aa13.13□□□□□ -0.31
CCND1-202ENST00000535993 ARHGAP29Q52LW3 1261 aa13.13□□□□□ -0.31
CCND1-202ENST00000535993 STXBP5Q5T5C0 1151 aa13.13□□□□□ -0.31
CCND1-202ENST00000535993 BRSK2Q8IWQ3 736 aa13.13□□□□□ -0.31
CCND1-202ENST00000535993 RSPRY1Q96DX4 576 aa13.13□□□□□ -0.31
CCND1-202ENST00000535993 LPIN3Q9BQK8 851 aa13.13□□□□□ -0.31
CCND1-202ENST00000535993 PANK2Q9BZ23 570 aa13.13□□□□□ -0.31
CCND1-202ENST00000535993 LRRC27Q9C0I9 530 aa13.13□□□□□ -0.31
CCND1-202ENST00000535993 IKZF4Q9H2S9 585 aa13.13□□□□□ -0.31
CCND1-202ENST00000535993 TMEM206Q9H813 350 aa13.13□□□□□ -0.31
CCND1-202ENST00000535993 PANK4Q9NVE7 773 aa13.13□□□□□ -0.31
CCND1-202ENST00000535993 ABI2Q9NYB9 513 aaPredicted RBP13.13□□□□□ -0.31
CCND1-202ENST00000535993 RBAKQ9NYW8 714 aaPredicted RBP13.13□□□□□ -0.31
CCND1-202ENST00000535993 NCDNQ9UBB6 729 aa13.13□□□□□ -0.31
CCND1-202ENST00000535993 TFIP11Q9UBB9 837 aaKnown RBP13.13□□□□□ -0.31
CCND1-202ENST00000535993 PCDHB5Q9Y5E4 795 aa13.13□□□□□ -0.31
CCND1-202ENST00000535993 FANCMQ8IYD8 2048 aa13.13□□□□□ -0.31
CCND1-202ENST00000535993 FRMD3A2A2Y4 597 aa13.12□□□□□ -0.31
CCND1-202ENST00000535993 LILRB5O75023 590 aa13.12□□□□□ -0.31
CCND1-202ENST00000535993 ATF6P18850 670 aa13.12□□□□□ -0.31
CCND1-202ENST00000535993 POLR2BP30876 1174 aaKnown RBP13.12□□□□□ -0.31
CCND1-202ENST00000535993 DNM1Q05193 864 aaKnown RBP13.12□□□□□ -0.31
CCND1-202ENST00000535993 NFE2Q16621 373 aaPredicted RBP13.12□□□□□ -0.31
CCND1-202ENST00000535993 TSSK4Q6SA08 328 aa13.12□□□□□ -0.31
CCND1-202ENST00000535993 STXBP4Q6ZWJ1 553 aa13.12□□□□□ -0.31
CCND1-202ENST00000535993 LRRTM3Q86VH5 581 aa13.12□□□□□ -0.31
CCND1-202ENST00000535993 GPIHBP1Q8IV16 184 aa13.12□□□□□ -0.31
CCND1-202ENST00000535993 CCDC65Q8IXS2 484 aa13.12□□□□□ -0.31
CCND1-202ENST00000535993 GPR161Q8N6U8 529 aaKnown RBP13.12□□□□□ -0.31
CCND1-202ENST00000535993 SAAL1Q96ER3 474 aa13.12□□□□□ -0.31
CCND1-202ENST00000535993 MKNK1Q9BUB5 465 aa13.12□□□□□ -0.31
CCND1-202ENST00000535993 EPC1Q9H2F5 836 aa13.12□□□□□ -0.31
CCND1-202ENST00000535993 THG1LQ9NWX6 298 aaKnown RBP13.12□□□□□ -0.31
CCND1-202ENST00000535993 ITGA11Q9UKX5 1188 aa13.12□□□□□ -0.31
CCND1-202ENST00000535993 AGAP1Q9UPQ3 857 aa13.12□□□□□ -0.31
CCND1-202ENST00000535993 R3HCC1Q9Y3T6 440 aaKnown RBP13.12□□□□□ -0.31
CCND1-202ENST00000535993 NCANO14594 1321 aa13.12□□□□□ -0.31
CCND1-202ENST00000535993 SCN1AP35498 2009 aa13.12□□□□□ -0.31
CCND1-202ENST00000535993 TCHHQ07283 1943 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 CACNA1AO00555 2505 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 A0A087X0B3 334 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 MYBPHLA2RUH7 354 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 SLC38A8A6NNN8 435 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 KIAA0391O15091 583 aaKnown RBP13.11□□□□□ -0.31
CCND1-202ENST00000535993 EXTL3O43909 919 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 HUS1O60921 280 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 ITGB3P05106 788 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 CHRNB1P11230 501 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 DDX6P26196 483 aaKnown RBP eCLIP13.11□□□□□ -0.31
CCND1-202ENST00000535993 CXCL12P48061 93 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 CASP5P51878 434 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 RBP5P82980 135 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 CYP4F8P98187 520 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 MYL7Q01449 175 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 DGKKQ5KSL6 1271 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 RALGPS2Q86X27 583 aaPredicted RBP13.11□□□□□ -0.31
CCND1-202ENST00000535993 TMEM86AQ8N2M4 240 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 PDCL2Q8N4E4 241 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 SPEM1Q8N4L4 309 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 DCLK2Q8N568 766 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 CSGALNACT2Q8N6G5 542 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 CELF5Q8N6W0 485 aaKnown RBP13.11□□□□□ -0.31
CCND1-202ENST00000535993 LRRC52Q8N7C0 313 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 C1orf127Q8N9H9 656 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 SPATA18Q8TC71 538 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 BPIFB1Q8TDL5 484 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 GIPC2Q8TF65 315 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 NOC3LQ8WTT2 800 aaKnown RBP13.11□□□□□ -0.31
CCND1-202ENST00000535993 ACBD6Q9BR61 282 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 IL21Q9HBE4 155 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 RCOR1Q9UKL0 485 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 CFAP45Q9UL16 551 aa13.11□□□□□ -0.31
CCND1-202ENST00000535993 SMG5Q9UPR3 1016 aaKnown RBP13.11□□□□□ -0.31
CCND1-202ENST00000535993 GOLGA8IPA6NC78 632 aa13.1□□□□□ -0.31
CCND1-202ENST00000535993 GOLGA8JA6NMD2 632 aa13.1□□□□□ -0.31
CCND1-202ENST00000535993 SOBPA7XYQ1 873 aa13.1□□□□□ -0.31
CCND1-202ENST00000535993 SPECC1L-ADORA2AF8WAN1 911 aa13.1□□□□□ -0.31
CCND1-202ENST00000535993 CUTAO60888 179 aa13.1□□□□□ -0.31
CCND1-202ENST00000535993 PRPF40AO75400 957 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms