RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 TANGO2Q6ICL3 276 aa12.76□□□□□ -0.37
KNTC1-208ENST00000535410 C1orf228Q6PIY5 440 aa12.76□□□□□ -0.37
KNTC1-208ENST00000535410 ZNF852Q6ZMS4 543 aa12.76□□□□□ -0.37
KNTC1-208ENST00000535410 ALYREFQ86V81 257 aaKnown RBP12.76□□□□□ -0.37
KNTC1-208ENST00000535410 NELFCDQ8IXH7 590 aa12.76□□□□□ -0.37
KNTC1-208ENST00000535410 YAF2Q8IY57 180 aa12.76□□□□□ -0.37
KNTC1-208ENST00000535410 HS6ST3Q8IZP7 471 aa12.76□□□□□ -0.37
KNTC1-208ENST00000535410 PDCL2Q8N4E4 241 aa12.76□□□□□ -0.37
KNTC1-208ENST00000535410 ZSCAN18Q8TBC5 510 aaPredicted RBP12.76□□□□□ -0.37
KNTC1-208ENST00000535410 HPS3Q969F9 1004 aa12.76□□□□□ -0.37
KNTC1-208ENST00000535410 TCEAL4Q96EI5 215 aa12.76□□□□□ -0.37
KNTC1-208ENST00000535410 PAGE5Q96GU1 130 aa12.76□□□□□ -0.37
KNTC1-208ENST00000535410 HPDLQ96IR7 371 aa12.76□□□□□ -0.37
KNTC1-208ENST00000535410 MTMR12Q9C0I1 747 aa12.76□□□□□ -0.37
KNTC1-208ENST00000535410 ATXN3LQ9H3M9 355 aa12.76□□□□□ -0.37
KNTC1-208ENST00000535410 BRD9Q9H8M2 597 aa12.76□□□□□ -0.37
KNTC1-208ENST00000535410 SLC39A2Q9NP94 309 aa12.76□□□□□ -0.37
KNTC1-208ENST00000535410 TRPV5Q9NQA5 729 aa12.76□□□□□ -0.37
KNTC1-208ENST00000535410 DDX43Q9NXZ2 648 aaKnown RBP12.76□□□□□ -0.37
KNTC1-208ENST00000535410 ABI2Q9NYB9 513 aaPredicted RBP12.76□□□□□ -0.37
KNTC1-208ENST00000535410 SERTAD1Q9UHV2 236 aa12.76□□□□□ -0.37
KNTC1-208ENST00000535410 A0A1W2PQ27 194 aa12.75□□□□□ -0.37
KNTC1-208ENST00000535410 A0A1W2PQ64 194 aa12.75□□□□□ -0.37
KNTC1-208ENST00000535410 A0A1W2PQD8 194 aa12.75□□□□□ -0.37
KNTC1-208ENST00000535410 KANSL1LA0AUZ9 987 aa12.75□□□□□ -0.37
KNTC1-208ENST00000535410 GOLGA6L4A6NEF3 574 aa12.75□□□□□ -0.37
KNTC1-208ENST00000535410 SOBPA7XYQ1 873 aa12.75□□□□□ -0.37
KNTC1-208ENST00000535410 H0Y858 1186 aa12.75□□□□□ -0.37
KNTC1-208ENST00000535410 TGFB1I1O43294 461 aa12.75□□□□□ -0.37
KNTC1-208ENST00000535410 DLATP10515 647 aaKnown RBP12.75□□□□□ -0.37
KNTC1-208ENST00000535410 HAPLN1P10915 354 aaPredicted RBP12.75□□□□□ -0.37
KNTC1-208ENST00000535410 HOXD13P35453 343 aa12.75□□□□□ -0.37
KNTC1-208ENST00000535410 CYP2J2P51589 502 aa12.75□□□□□ -0.37
KNTC1-208ENST00000535410 TRPC3Q13507 836 aa12.75□□□□□ -0.37
KNTC1-208ENST00000535410 CUL4BQ13620 913 aa12.75□□□□□ -0.37
KNTC1-208ENST00000535410 PDCD11Q14690 1871 aaKnown RBP12.75□□□□□ -0.37
KNTC1-208ENST00000535410 C4orf50Q6ZRC1 276 aa12.75□□□□□ -0.37
KNTC1-208ENST00000535410 TRAPPC11Q7Z392 1133 aa12.75□□□□□ -0.37
KNTC1-208ENST00000535410 CBWD2Q8IUF1 395 aa12.75□□□□□ -0.37
KNTC1-208ENST00000535410 ADGRF2Q8IZF7 708 aa12.75□□□□□ -0.37
KNTC1-208ENST00000535410 TMEM130Q8N3G9 435 aa12.75□□□□□ -0.37
KNTC1-208ENST00000535410 RDH13Q8NBN7 331 aa12.75□□□□□ -0.37
KNTC1-208ENST00000535410 DOCK8Q8NF50 2099 aa12.75□□□□□ -0.37
KNTC1-208ENST00000535410 SHKBP1Q8TBC3 707 aa12.75□□□□□ -0.37
KNTC1-208ENST00000535410 TMEM209Q96SK2 561 aa12.75□□□□□ -0.37
KNTC1-208ENST00000535410 BCO2Q9BYV7 579 aa12.75□□□□□ -0.37
KNTC1-208ENST00000535410 UXTQ9UBK9 157 aaPredicted RBP12.75□□□□□ -0.37
KNTC1-208ENST00000535410 A0A1B0GVL5 298 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 A0A1W2PRU2 124 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 ZNF263O14978 683 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 CLIC2O15247 247 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 PI15O43692 258 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 ACTN4O43707 911 aaKnown RBP12.74□□□□□ -0.37
KNTC1-208ENST00000535410 PHACTR2O75167 634 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 VNN2O95498 520 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 CSH1P0DML2 217 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 CSH2P0DML3 217 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 DDX6P26196 483 aaKnown RBP eCLIP12.74□□□□□ -0.37
KNTC1-208ENST00000535410 GABRR2P28476 465 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 WEE1P30291 646 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 ATICP31939 592 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 CCR2P41597 374 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 MLLT6P55198 1093 aaPredicted RBP12.74□□□□□ -0.37
KNTC1-208ENST00000535410 NUCB2P80303 420 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 CYP24A1Q07973 514 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 TEAD2Q15562 447 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 INTS6LQ5JSJ4 861 aaKnown RBP12.74□□□□□ -0.37
KNTC1-208ENST00000535410 LRRTM3Q86VH5 581 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 SPATA2LQ8IUW3 424 aaPredicted RBP12.74□□□□□ -0.37
KNTC1-208ENST00000535410 MFSD6LQ8IWD5 586 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 GLIS3Q8NEA6 775 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 ZSWIM2Q8NEG5 633 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 ST13P5Q8NFI4 369 aaPredicted RBP12.74□□□□□ -0.37
KNTC1-208ENST00000535410 PJA1Q8NG27 643 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 TMEM174Q8WUU8 243 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 CCDC127Q96BQ5 260 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 MSANTD3Q96H12 275 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 FUBP3Q96I24 572 aaKnown RBP eCLIP12.74□□□□□ -0.37
KNTC1-208ENST00000535410 CEP295NLQ96MC4 621 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 MMS19Q96T76 1030 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 CGRRF1Q99675 332 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 DNAJC25Q9H1X3 360 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 SEMA4AQ9H3S1 761 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 TASP1Q9H6P5 420 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 THG1LQ9NWX6 298 aaKnown RBP12.74□□□□□ -0.37
KNTC1-208ENST00000535410 OBP2AQ9NY56 170 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 EHD2Q9NZN4 543 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 SIX4Q9UIU6 781 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 CDH9Q9ULB4 789 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 L1RE1Q9UN81 338 aa12.74□□□□□ -0.37
KNTC1-208ENST00000535410 FAM237AA0A1B0GTK4 181 aa12.73□□□□□ -0.37
KNTC1-208ENST00000535410 FAM170BA6NMN3 283 aa12.73□□□□□ -0.37
KNTC1-208ENST00000535410 PROB1E7EW31 1015 aa12.73□□□□□ -0.37
KNTC1-208ENST00000535410 PDXKO00764 312 aa12.73□□□□□ -0.37
KNTC1-208ENST00000535410 GABRDO14764 452 aa12.73□□□□□ -0.37
KNTC1-208ENST00000535410 CALUO43852 315 aaPredicted RBP12.73□□□□□ -0.37
KNTC1-208ENST00000535410 MOSPD3O75425 235 aa12.73□□□□□ -0.37
KNTC1-208ENST00000535410 GDI1P31150 447 aa12.73□□□□□ -0.37
KNTC1-208ENST00000535410 TNNC1P63316 161 aa12.73□□□□□ -0.37
KNTC1-208ENST00000535410 UBXN2BQ14CS0 331 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms