RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 LOC730098B7Z3J9 87 aa24.34■■□□□ 1.49
SFSWAP-204ENST00000535399 STX10O60499 249 aa24.34■■□□□ 1.49
SFSWAP-204ENST00000535399 MXI1P50539 228 aa24.34■■□□□ 1.49
SFSWAP-204ENST00000535399 TSPY1Q01534 308 aa24.34■■□□□ 1.49
SFSWAP-204ENST00000535399 DUSP4Q13115 394 aa24.34■■□□□ 1.49
SFSWAP-204ENST00000535399 ZNF667Q5HYK9 610 aa24.34■■□□□ 1.49
SFSWAP-204ENST00000535399 INTS6LQ5JSJ4 861 aaKnown RBP24.34■■□□□ 1.49
SFSWAP-204ENST00000535399 KRT39Q6A163 491 aa24.34■■□□□ 1.49
SFSWAP-204ENST00000535399 DCP1BQ8IZD4 617 aaKnown RBP24.34■■□□□ 1.49
SFSWAP-204ENST00000535399 SLC35C1Q96A29 364 aa24.34■■□□□ 1.49
SFSWAP-204ENST00000535399 PI4K2AQ9BTU6 479 aa24.34■■□□□ 1.49
SFSWAP-204ENST00000535399 SRRTQ9BXP5 876 aaKnown RBP24.34■■□□□ 1.49
SFSWAP-204ENST00000535399 SMYD3Q9H7B4 428 aa24.34■■□□□ 1.49
SFSWAP-204ENST00000535399 TMLHEQ9NVH6 421 aa24.34■■□□□ 1.49
SFSWAP-204ENST00000535399 NME7Q9Y5B8 376 aa24.34■■□□□ 1.49
SFSWAP-204ENST00000535399 MTCL1Q9Y4B5 1905 aaKnown RBP24.33■■□□□ 1.49
SFSWAP-204ENST00000535399 XYLBO75191 536 aa24.33■■□□□ 1.49
SFSWAP-204ENST00000535399 LMO2P25791 158 aa24.33■■□□□ 1.49
SFSWAP-204ENST00000535399 PCSK1P29120 753 aa24.33■■□□□ 1.49
SFSWAP-204ENST00000535399 SMARCB1Q12824 385 aa24.33■■□□□ 1.49
SFSWAP-204ENST00000535399 CCDC40Q4G0X9 1142 aa24.33■■□□□ 1.49
SFSWAP-204ENST00000535399 CBWD6Q4V339 395 aa24.33■■□□□ 1.49
SFSWAP-204ENST00000535399 CBWD3Q5JTY5 395 aa24.33■■□□□ 1.49
SFSWAP-204ENST00000535399 CBWD5Q5RIA9 395 aa24.33■■□□□ 1.49
SFSWAP-204ENST00000535399 TCERG1LQ5VWI1 586 aa24.33■■□□□ 1.49
SFSWAP-204ENST00000535399 SPOPLQ6IQ16 392 aa24.33■■□□□ 1.49
SFSWAP-204ENST00000535399 GJD3Q8N144 294 aa24.33■■□□□ 1.49
SFSWAP-204ENST00000535399 TTC9BQ8N6N2 239 aa24.33■■□□□ 1.49
SFSWAP-204ENST00000535399 SEMA4DQ92854 862 aa24.33■■□□□ 1.49
SFSWAP-204ENST00000535399 RPGRIP1Q96KN7 1286 aa24.33■■□□□ 1.49
SFSWAP-204ENST00000535399 APOBEC3GQ9HC16 384 aaKnown RBP24.33■■□□□ 1.49
SFSWAP-204ENST00000535399 YIPF1Q9Y548 306 aa24.33■■□□□ 1.49
SFSWAP-204ENST00000535399 CLUHO75153 1309 aa24.33■■□□□ 1.48
SFSWAP-204ENST00000535399 LRRN2O75325 713 aa24.32■■□□□ 1.48
SFSWAP-204ENST00000535399 CDR1P51861 262 aa24.32■■□□□ 1.48
SFSWAP-204ENST00000535399 CCDC183Q5T5S1 534 aa24.32■■□□□ 1.48
SFSWAP-204ENST00000535399 GRASPQ7Z6J2 395 aaPredicted RBP24.32■■□□□ 1.48
SFSWAP-204ENST00000535399 SDCBP2Q9H190 292 aa24.32■■□□□ 1.48
SFSWAP-204ENST00000535399 HSFX1Q9UBD0 423 aa24.32■■□□□ 1.48
SFSWAP-204ENST00000535399 SLC27A5Q9Y2P5 690 aa24.32■■□□□ 1.48
SFSWAP-204ENST00000535399 CUL9Q8IWT3 2517 aa24.32■■□□□ 1.48
SFSWAP-204ENST00000535399 FGFR1OPO95684 399 aaKnown RBP24.31■■□□□ 1.48
SFSWAP-204ENST00000535399 GNA14O95837 355 aa24.31■■□□□ 1.48
SFSWAP-204ENST00000535399 LRG1P02750 347 aa24.31■■□□□ 1.48
SFSWAP-204ENST00000535399 GNL1P36915 607 aaPredicted RBP24.31■■□□□ 1.48
SFSWAP-204ENST00000535399 RAP1GAPP47736 663 aa24.31■■□□□ 1.48
SFSWAP-204ENST00000535399 CDH8P55286 799 aa24.31■■□□□ 1.48
SFSWAP-204ENST00000535399 MARSP56192 900 aaKnown RBP24.31■■□□□ 1.48
SFSWAP-204ENST00000535399 NTHL1P78549 312 aa24.31■■□□□ 1.48
SFSWAP-204ENST00000535399 TWF1Q12792 350 aa24.31■■□□□ 1.48
SFSWAP-204ENST00000535399 CCDC142Q17RM4 750 aa24.31■■□□□ 1.48
SFSWAP-204ENST00000535399 FAM171BQ6P995 826 aa24.31■■□□□ 1.48
SFSWAP-204ENST00000535399 SCARA5Q6ZMJ2 495 aa24.31■■□□□ 1.48
SFSWAP-204ENST00000535399 C2orf15Q8WU43 125 aaKnown RBP24.31■■□□□ 1.48
SFSWAP-204ENST00000535399 SYT15Q9BQS2 421 aa24.31■■□□□ 1.48
SFSWAP-204ENST00000535399 SNX25Q9H3E2 840 aa24.31■■□□□ 1.48
SFSWAP-204ENST00000535399 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.31■■□□□ 1.485e-7■■■■■ 26.9
SFSWAP-204ENST00000535399 HCFC1R1Q9NWW0 138 aa24.31■■□□□ 1.48
SFSWAP-204ENST00000535399 DNMT3BQ9UBC3 853 aaKnown RBP24.31■■□□□ 1.48
SFSWAP-204ENST00000535399 CDH9Q9ULB4 789 aa24.31■■□□□ 1.48
SFSWAP-204ENST00000535399 MYBPHLA2RUH7 354 aa24.3■■□□□ 1.48
SFSWAP-204ENST00000535399 ATP2C2O75185 946 aa24.3■■□□□ 1.48
SFSWAP-204ENST00000535399 CLSTN1O94985 981 aa24.3■■□□□ 1.48
SFSWAP-204ENST00000535399 PDGFRBP09619 1106 aa24.3■■□□□ 1.48
SFSWAP-204ENST00000535399 P4HA1P13674 534 aa24.3■■□□□ 1.48
SFSWAP-204ENST00000535399 SP100P23497 879 aaPredicted RBP24.3■■□□□ 1.48
SFSWAP-204ENST00000535399 ERCC5P28715 1186 aaPredicted RBP24.3■■□□□ 1.48
SFSWAP-204ENST00000535399 SSTR3P32745 418 aaPredicted RBP24.3■■□□□ 1.48
SFSWAP-204ENST00000535399 ASPAP45381 313 aa24.3■■□□□ 1.48
SFSWAP-204ENST00000535399 NOP14P78316 857 aaKnown RBP24.3■■□□□ 1.48
SFSWAP-204ENST00000535399 NFE2Q16621 373 aaPredicted RBP24.3■■□□□ 1.48
SFSWAP-204ENST00000535399 TRIM59Q8IWR1 403 aa24.3■■□□□ 1.48
SFSWAP-204ENST00000535399 FBXL13Q8NEE6 735 aa24.3■■□□□ 1.48
SFSWAP-204ENST00000535399 OR6B3Q8NGW1 331 aa24.3■■□□□ 1.48
SFSWAP-204ENST00000535399 SPPL2BQ8TCT7 592 aa24.3■■□□□ 1.48
SFSWAP-204ENST00000535399 CRTAC1Q9NQ79 661 aa24.3■■□□□ 1.48
SFSWAP-204ENST00000535399 RAB20Q9NX57 234 aa24.3■■□□□ 1.48
SFSWAP-204ENST00000535399 ABI2Q9NYB9 513 aaPredicted RBP24.3■■□□□ 1.48
SFSWAP-204ENST00000535399 TMEM63CQ9P1W3 806 aa24.3■■□□□ 1.48
SFSWAP-204ENST00000535399 CEP72Q9P209 647 aa24.3■■□□□ 1.48
SFSWAP-204ENST00000535399 DACH1Q9UI36 760 aa24.3■■□□□ 1.48
SFSWAP-204ENST00000535399 GTF3C4Q9UKN8 822 aa24.3■■□□□ 1.48
SFSWAP-204ENST00000535399 USTQ9Y2C2 406 aa24.3■■□□□ 1.48
SFSWAP-204ENST00000535399 COQ4Q9Y3A0 265 aa24.3■■□□□ 1.48
SFSWAP-204ENST00000535399 C2CD4DB7Z1M9 353 aa24.29■■□□□ 1.48
SFSWAP-204ENST00000535399 SOAT2O75908 522 aa24.29■■□□□ 1.48
SFSWAP-204ENST00000535399 PSMC1P62191 440 aaKnown RBP24.29■■□□□ 1.48
SFSWAP-204ENST00000535399 IRF2BP1Q8IU81 584 aa24.29■■□□□ 1.48
SFSWAP-204ENST00000535399 IMPG2Q9BZV3 1241 aa24.29■■□□□ 1.48
SFSWAP-204ENST00000535399 DNAJC25Q9H1X3 360 aa24.29■■□□□ 1.48
SFSWAP-204ENST00000535399 NR2E1Q9Y466 385 aa24.29■■□□□ 1.48
SFSWAP-204ENST00000535399 PCDHB5Q9Y5E4 795 aa24.29■■□□□ 1.48
SFSWAP-204ENST00000535399 PMM2O15305 246 aa24.28■■□□□ 1.48
SFSWAP-204ENST00000535399 N4BP1O75113 896 aaKnown RBP24.28■■□□□ 1.48
SFSWAP-204ENST00000535399 HAPLN1P10915 354 aaPredicted RBP24.28■■□□□ 1.48
SFSWAP-204ENST00000535399 TUFMP49411 452 aaKnown RBP24.28■■□□□ 1.48
SFSWAP-204ENST00000535399 CT47A1Q5JQC4 288 aaPredicted RBP24.28■■□□□ 1.48
SFSWAP-204ENST00000535399 BCO2Q9BYV7 579 aa24.28■■□□□ 1.48
SFSWAP-204ENST00000535399 NIF3L1Q9GZT8 377 aa24.28■■□□□ 1.48
SFSWAP-204ENST00000535399 BDP1A6H8Y1 2624 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms