RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 CTAGE15A4D2H0 777 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 TRAPPC3O43617 180 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 TACC1O75410 805 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 TADA2AO75478 443 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 ITGB1P05556 798 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 CTAGE8P0CG41 777 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 TTC31Q49AM3 519 aaPredicted RBP13.11□□□□□ -0.31
SCARB1-204ENST00000535005 FAM109BQ6ICB4 259 aaPredicted RBP13.11□□□□□ -0.31
SCARB1-204ENST00000535005 CTAGE6Q86UF2 777 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 CTAGE4Q8IX94 777 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 C10orf67Q8IYJ2 551 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 SLC39A11Q8N1S5 342 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 SPATA18Q8TC71 538 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 SHC3Q92529 594 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 BAP1Q92560 729 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.11□□□□□ -0.312e-6■■■■■ 93.7
SCARB1-204ENST00000535005 AJAP1Q9UKB5 411 aaPredicted RBP13.11□□□□□ -0.31
SCARB1-204ENST00000535005 CNTN6Q9UQ52 1028 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 LCHNA4D1U4 455 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 GRXCR1A8MXD5 290 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 F8W810 466 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 CYB561D2O14569 222 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 HUS1O60921 280 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 CYP11A1P05108 521 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 TYMPP19971 482 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 ACO1P21399 889 aaKnown RBP13.11□□□□□ -0.31
SCARB1-204ENST00000535005 PPM1AP35813 382 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 JAM2P57087 298 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 CORO7P57737 925 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 YWHAEP62258 255 aaKnown RBP13.11□□□□□ -0.31
SCARB1-204ENST00000535005 ZBED6P86452 979 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 ELAVL2Q12926 359 aaKnown RBP13.11□□□□□ -0.31
SCARB1-204ENST00000535005 SOWAHAQ2M3V2 549 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 SPOUT1Q5T280 376 aaKnown RBP13.11□□□□□ -0.31
SCARB1-204ENST00000535005 DSTYKQ6XUX3 929 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 CACNA2D4Q7Z3S7 1137 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 TMTC1Q8IUR5 882 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 TDHQ8IZJ6 230 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 TMEM86AQ8N2M4 240 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 KAT5Q92993 513 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 IGSF21Q96ID5 467 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 RPGRIP1Q96KN7 1286 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 NAPGQ99747 312 aaPredicted RBP13.11□□□□□ -0.31
SCARB1-204ENST00000535005 SDCBP2Q9H190 292 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 NUCKS1Q9H1E3 243 aaKnown RBP13.11□□□□□ -0.31
SCARB1-204ENST00000535005 GEMIN8Q9NWZ8 242 aaKnown RBP13.11□□□□□ -0.31
SCARB1-204ENST00000535005 SPG21Q9NZD8 308 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 PCDHB8Q9UN66 801 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 LUC7L2Q9Y383 392 aaKnown RBP13.11□□□□□ -0.31
SCARB1-204ENST00000535005 RWDD3Q9Y3V2 267 aa13.11□□□□□ -0.31
SCARB1-204ENST00000535005 LINC01553A4QN01 128 aa13.1□□□□□ -0.31
SCARB1-204ENST00000535005 RNF225M0QZC1 329 aaPredicted RBP13.1□□□□□ -0.31
SCARB1-204ENST00000535005 SYN3O14994 580 aa13.1□□□□□ -0.31
SCARB1-204ENST00000535005 BRCC3P46736 316 aa13.1□□□□□ -0.31
SCARB1-204ENST00000535005 FXR1P51114 621 aaKnown RBP eCLIP13.1□□□□□ -0.31
SCARB1-204ENST00000535005 RABGGTBP53611 331 aa13.1□□□□□ -0.31
SCARB1-204ENST00000535005 INCA1Q0VD86 236 aa13.1□□□□□ -0.31
SCARB1-204ENST00000535005 DRAP1Q14919 205 aaPredicted RBP13.1□□□□□ -0.31
SCARB1-204ENST00000535005 TMEM173Q86WV6 379 aaPredicted RBP13.1□□□□□ -0.31
SCARB1-204ENST00000535005 RNF168Q8IYW5 571 aaPredicted RBP13.1□□□□□ -0.31
SCARB1-204ENST00000535005 APPL2Q8NEU8 664 aa13.1□□□□□ -0.31
SCARB1-204ENST00000535005 BCL7CQ8WUZ0 217 aaPredicted RBP13.1□□□□□ -0.31
SCARB1-204ENST00000535005 MMS19Q96T76 1030 aa13.1□□□□□ -0.31
SCARB1-204ENST00000535005 GPR88Q9GZN0 384 aa13.1□□□□□ -0.31
SCARB1-204ENST00000535005 SMYD3Q9H7B4 428 aa13.1□□□□□ -0.31
SCARB1-204ENST00000535005 NLRC4Q9NPP4 1024 aa13.1□□□□□ -0.31
SCARB1-204ENST00000535005 STK39Q9UEW8 545 aa13.1□□□□□ -0.31
SCARB1-204ENST00000535005 DSEQ9UL01 958 aa13.1□□□□□ -0.31
SCARB1-204ENST00000535005 PCDHB12Q9Y5F1 795 aa13.1□□□□□ -0.31
SCARB1-204ENST00000535005 SF3B1O75533 1304 aaKnown RBP eCLIP13.1□□□□□ -0.311e-6■■■■■ 121.3
SCARB1-204ENST00000535005 NT5C1B-RDH14C9J2C7 533 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 GABRDO14764 452 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 WEE2P0C1S8 567 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 ODC1P11926 461 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 WARSP23381 471 aaKnown RBP13.09□□□□□ -0.31
SCARB1-204ENST00000535005 CASP14P31944 242 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 BMPR1AP36894 532 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 PBX3P40426 434 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 CASP8Q14790 479 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 ARHGAP44Q17R89 818 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 FUT10Q6P4F1 479 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 PDXDC1Q6P996 788 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 FMNL3Q8IVF7 1028 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 FAM71AQ8IYT1 594 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 HASPINQ8TF76 798 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 KBTBD7Q8WVZ9 684 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 RUBCNQ92622 972 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 SYN2Q92777 582 aaPredicted RBP13.09□□□□□ -0.31
SCARB1-204ENST00000535005 SAMD11Q96NU1 681 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 SPAG5Q96R06 1193 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 PLVAPQ9BX97 442 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 CISHQ9NSE2 258 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 TARSL2A2RTX5 802 aaKnown RBP13.09□□□□□ -0.31
SCARB1-204ENST00000535005 F8VZ95 297 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 I3L4J1 428 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 FOXN3O00409 490 aaPredicted RBP13.09□□□□□ -0.31
SCARB1-204ENST00000535005 MFAP3LO75121 409 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 CLSTN1O94985 981 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 RB1P06400 928 aa13.09□□□□□ -0.31
SCARB1-204ENST00000535005 FGFR3P22607 806 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms