RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 LHX6Q9UPM6 363 aa10.9□□□□□ -0.66
CLSTN3-203ENST00000534830 TIMM13Q9Y5L4 95 aaPredicted RBP10.9□□□□□ -0.66
CLSTN3-203ENST00000534830 SPAG17Q6Q759 2223 aa10.9□□□□□ -0.66
CLSTN3-203ENST00000534830 OR6C75A6NL08 312 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 SRRM3A6NNA2 597 aaPredicted RBP10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 ZNF197O14709 1029 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 PPP6R2O75170 966 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 OR4Q2P0C623 313 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 ZNF806P0C7X5 589 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 GAP43P17677 238 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 CASP5P51878 434 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 WNT7BP56706 349 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 RING1Q06587 406 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 TWF1Q12792 350 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 GAS6Q14393 721 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 TMEM132DQ14C87 1099 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 POSTNQ15063 836 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 E2F4Q16254 413 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 CCDC73Q6ZRK6 1079 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 EFCAB13Q8IY85 973 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 HS6ST3Q8IZP7 471 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 SPEM1Q8N4L4 309 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 ZSWIM2Q8NEG5 633 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 IRF7Q92985 503 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 CORO1BQ9BR76 489 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 TRMT61BQ9BVS5 477 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 FGFBP2Q9BYJ0 223 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 DNAJC25Q9H1X3 360 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 ZFP14Q9HCL3 533 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 HSFX1Q9UBD0 423 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 PIAS3Q9Y6X2 628 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 TICRRQ7Z2Z1 1910 aa10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 NUP210Q8TEM1 1887 aaPredicted RBP10.89□□□□□ -0.67
CLSTN3-203ENST00000534830 MTMR11A4FU01 709 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 TMEM8BA6NDV4 472 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 CHRNB1P11230 501 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 CPB1P15086 417 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 CCNE1P24864 410 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 GDI1P31150 447 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 TXLNAP40222 546 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 NOVA1P51513 510 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 OVOS1Q6IE37 1185 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 CENPPQ6IPU0 288 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 DSTYKQ6XUX3 929 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 PDZD4Q76G19 769 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 NT5DC4Q86YG4 428 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 TMC8Q8IU68 726 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 LEMD2Q8NC56 503 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 OR10T2Q8NGX3 314 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 CXorf38Q8TB03 319 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 POMGNT1Q8WZA1 660 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 FAM212AQ96EL1 285 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 ZNF512Q96ME7 567 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 ZSWIM3Q96MP5 696 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 ASB16Q96NS5 453 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 ACCSQ96QU6 501 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 TMEM209Q96SK2 561 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 ADAM33Q9BZ11 813 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 PANK2Q9BZ23 570 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 SMOC1Q9H4F8 434 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 MRPL44Q9H9J2 332 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 TRPV4Q9HBA0 871 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 FOXD4L1Q9NU39 408 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 KBTBD4Q9NVX7 518 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 DPP3Q9NY33 737 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 TBC1D7Q9P0N9 293 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 YIPF1Q9Y548 306 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 PCDHB13Q9Y5F0 798 aa10.88□□□□□ -0.67
CLSTN3-203ENST00000534830 K7ESF4 209 aa10.87□□□□□ -0.67
CLSTN3-203ENST00000534830 GIPC1O14908 333 aa10.87□□□□□ -0.67
CLSTN3-203ENST00000534830 SPTLC2O15270 562 aa10.87□□□□□ -0.67
CLSTN3-203ENST00000534830 IL18RAPO95256 599 aa10.87□□□□□ -0.67
CLSTN3-203ENST00000534830 ODC1P11926 461 aa10.87□□□□□ -0.67
CLSTN3-203ENST00000534830 GARTP22102 1010 aa10.87□□□□□ -0.67
CLSTN3-203ENST00000534830 STAT6P42226 847 aa10.87□□□□□ -0.67
CLSTN3-203ENST00000534830 DUSP4Q13115 394 aa10.87□□□□□ -0.67
CLSTN3-203ENST00000534830 ALCAMQ13740 583 aa10.87□□□□□ -0.67
CLSTN3-203ENST00000534830 FAM78AQ5JUQ0 283 aa10.87□□□□□ -0.67
CLSTN3-203ENST00000534830 CYP4A22Q5TCH4 519 aa10.87□□□□□ -0.67
CLSTN3-203ENST00000534830 RNF43Q68DV7 783 aa10.87□□□□□ -0.67
CLSTN3-203ENST00000534830 IQCEQ6IPM2 695 aa10.87□□□□□ -0.67
CLSTN3-203ENST00000534830 CNNM4Q6P4Q7 775 aa10.87□□□□□ -0.67
CLSTN3-203ENST00000534830 USP37Q86T82 979 aa10.87□□□□□ -0.67
CLSTN3-203ENST00000534830 ELMOD1Q8N336 334 aa10.87□□□□□ -0.67
CLSTN3-203ENST00000534830 PGLYRP2Q96PD5 576 aa10.87□□□□□ -0.67
CLSTN3-203ENST00000534830 ZCWPW1Q9H0M4 648 aa10.87□□□□□ -0.67
CLSTN3-203ENST00000534830 ZNF334Q9HCZ1 680 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-203ENST00000534830 TRPV5Q9NQA5 729 aa10.87□□□□□ -0.67
CLSTN3-203ENST00000534830 RBM12Q9NTZ6 932 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-203ENST00000534830 PANK4Q9NVE7 773 aa10.87□□□□□ -0.67
CLSTN3-203ENST00000534830 EXOC7Q9UPT5 735 aa10.87□□□□□ -0.67
CLSTN3-203ENST00000534830 OBSL1O75147 1896 aa10.87□□□□□ -0.67
CLSTN3-203ENST00000534830 NCANO14594 1321 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 CYB561D2O14569 222 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 GCNT3O95395 438 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 YEATS4O95619 227 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 LDHAP00338 332 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 HOXC13P31276 330 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 TAF6P49848 677 aa10.86□□□□□ -0.67
CLSTN3-203ENST00000534830 ZNF252P-AS1Q0IIN9 211 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms