RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 IQCKQ8N0W5 287 aa9.54□□□□□ -0.88
SF3B2-216ENST00000534765 CFAP61Q8NHU2 1237 aa9.54□□□□□ -0.88
SF3B2-216ENST00000534765 ARHGAP39Q9C0H5 1083 aa9.54□□□□□ -0.88
SF3B2-216ENST00000534765 RNF19AQ9NV58 838 aa9.54□□□□□ -0.88
SF3B2-216ENST00000534765 UTP6Q9NYH9 597 aaKnown RBP9.54□□□□□ -0.88
SF3B2-216ENST00000534765 ARMCX3Q9UH62 379 aaPredicted RBP9.54□□□□□ -0.88
SF3B2-216ENST00000534765 TBK1Q9UHD2 729 aa9.54□□□□□ -0.88
SF3B2-216ENST00000534765 USP34Q70CQ2 3546 aa9.54□□□□□ -0.88
SF3B2-216ENST00000534765 A0A1W2PQJ5 194 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 P4HA2O15460 535 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 B4GALT5O43286 388 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 SLC26A4O43511 780 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 FAM189A1O60320 539 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 JAK3P52333 1124 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 NLRP11P59045 1033 aaKnown RBP9.53□□□□□ -0.88
SF3B2-216ENST00000534765 ZNF844Q08AG5 666 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 SNAPC2Q13487 334 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 CAPSQ13938 189 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 FIGNQ5HY92 759 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 CREG2Q8IUH2 290 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 RIBC1Q8N443 379 aaPredicted RBP9.53□□□□□ -0.88
SF3B2-216ENST00000534765 DHX38Q92620 1227 aaKnown RBP9.53□□□□□ -0.88
SF3B2-216ENST00000534765 ERP27Q96DN0 273 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 LRRC27Q9C0I9 530 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 CNOT10Q9H9A5 744 aaKnown RBP9.53□□□□□ -0.88
SF3B2-216ENST00000534765 ZNF302Q9NR11 478 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 SEPT11Q9NVA2 429 aaKnown RBP9.53□□□□□ -0.88
SF3B2-216ENST00000534765 GCNT4Q9P109 453 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 ANO9A1A5B4 782 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 MAGEA13PA6NCF6 341 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 CFHP08603 1231 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 PPP1R2P41236 205 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 FMO5P49326 533 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 KIF11P52732 1056 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 ARHGAP1Q07960 439 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 EMC2Q15006 297 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 LACTB2Q53H82 288 aaPredicted RBP9.53□□□□□ -0.88
SF3B2-216ENST00000534765 PPP1R2P3Q6NXS1 205 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 FOXR2Q6PJQ5 311 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 FRMD5Q7Z6J6 570 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 LNX1Q8TBB1 728 aaPredicted RBP9.53□□□□□ -0.88
SF3B2-216ENST00000534765 SPIRE2Q8WWL2 714 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 TSG101Q99816 390 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.53□□□□□ -0.881e-7■■■■□ 23.5
SF3B2-216ENST00000534765 PCDH10Q9P2E7 1040 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 PCDHA13Q9Y5I0 950 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 EMSYQ7Z589 1322 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 STK10O94804 968 aaKnown RBP9.53□□□□□ -0.88
SF3B2-216ENST00000534765 CALB2P22676 271 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 ACOT2P49753 483 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 CELF3Q5SZQ8 465 aaKnown RBP9.53□□□□□ -0.88
SF3B2-216ENST00000534765 SLC20A1Q8WUM9 679 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 TSPAN18Q96SJ8 248 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 RNPEPL1Q9HAU8 725 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 ARHGAP28Q9P2N2 729 aa9.53□□□□□ -0.88
SF3B2-216ENST00000534765 UTP11Q9Y3A2 253 aaKnown RBP9.53□□□□□ -0.88
SF3B2-216ENST00000534765 ADGRA2Q96PE1 1338 aa9.52□□□□□ -0.88
SF3B2-216ENST00000534765 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.52□□□□□ -0.88
SF3B2-216ENST00000534765 AFPP02771 609 aaKnown RBP9.52□□□□□ -0.88
SF3B2-216ENST00000534765 PSAPP07602 524 aa9.52□□□□□ -0.88
SF3B2-216ENST00000534765 GSTA1P08263 222 aa9.52□□□□□ -0.88
SF3B2-216ENST00000534765 GAP43P17677 238 aa9.52□□□□□ -0.88
SF3B2-216ENST00000534765 MUTP22033 750 aa9.52□□□□□ -0.88
SF3B2-216ENST00000534765 SSTR3P32745 418 aaPredicted RBP9.52□□□□□ -0.88
SF3B2-216ENST00000534765 ARL2P36404 184 aa9.52□□□□□ -0.88
SF3B2-216ENST00000534765 NCCRP1Q6ZVX7 275 aaPredicted RBP9.52□□□□□ -0.88
SF3B2-216ENST00000534765 ZFAND2BQ8WV99 257 aa9.52□□□□□ -0.88
SF3B2-216ENST00000534765 CAVIN3Q969G5 261 aa9.52□□□□□ -0.88
SF3B2-216ENST00000534765 NTPCRQ9BSD7 190 aaKnown RBP9.52□□□□□ -0.88
SF3B2-216ENST00000534765 SYT11Q9BT88 431 aa9.52□□□□□ -0.88
SF3B2-216ENST00000534765 FAM129AQ9BZQ8 928 aa9.52□□□□□ -0.88
SF3B2-216ENST00000534765 TMEM117Q9H0C3 514 aa9.52□□□□□ -0.88
SF3B2-216ENST00000534765 ADAMTS1Q9UHI8 967 aa9.52□□□□□ -0.88
SF3B2-216ENST00000534765 GGA2Q9UJY4 613 aa9.52□□□□□ -0.88
SF3B2-216ENST00000534765 NENFQ9UMX5 172 aa9.52□□□□□ -0.88
SF3B2-216ENST00000534765 ITM2BQ9Y287 266 aa9.52□□□□□ -0.88
SF3B2-216ENST00000534765 SH3GLB1Q9Y371 365 aa9.52□□□□□ -0.88
SF3B2-216ENST00000534765 UMODL1Q5DID0 1318 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 A6NJR5 290 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 FAM155AB1AL88 458 aaPredicted RBP9.52□□□□□ -0.89
SF3B2-216ENST00000534765 CAPN9O14815 690 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 EPHB2P29323 1055 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 SFNP31947 248 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 BFSP1Q12934 665 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 RPS6KA1Q15418 735 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 KIAA0753Q2KHM9 967 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 SNX30Q5VWJ9 437 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 SPOPLQ6IQ16 392 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 LRRC8BQ6P9F7 803 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 GPR142Q7Z601 462 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 MAP4K3Q8IVH8 894 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 SCUBE1Q8IWY4 988 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 PIP4K2CQ8TBX8 421 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 SCG3Q8WXD2 468 aaKnown RBP9.52□□□□□ -0.89
SF3B2-216ENST00000534765 CCDC127Q96BQ5 260 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 KREMEN1Q96MU8 473 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 TXLNGQ9NUQ3 528 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 NKIRAS1Q9NYS0 192 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 ABLIM1O14639 778 aa9.52□□□□□ -0.89
SF3B2-216ENST00000534765 TROVE2P10155 538 aaKnown RBP eCLIP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms