RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	MFSD1	Q9H3U5	465 aa		5.52	□□□□□ -1.53
ECHDC1-223	ENST00000534442	IFT122	Q9HBG6	1241 aa		5.52	□□□□□ -1.53
ECHDC1-223	ENST00000534442	PARD6A	Q9NPB6	346 aa		5.52	□□□□□ -1.53
ECHDC1-223	ENST00000534442	PRSS50	Q9UI38	385 aa		5.52	□□□□□ -1.53
ECHDC1-223	ENST00000534442	PAXBP1	Q9Y5B6	917 aa		5.52	□□□□□ -1.53
ECHDC1-223	ENST00000534442	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	5.52	□□□□□ -1.53
ECHDC1-223	ENST00000534442	UTY	O14607	1347 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442		A0A1B0GUL7	405 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	ABLIM1	O14639	778 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	PI15	O43692	258 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	ADAM23	O75077	832 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	PCDH8	O95206	1070 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	VIPR1	P32241	457 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	SLC5A3	P53794	718 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	NKX3-2	P78367	333 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	CDK17	Q00537	523 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	ARHGAP29	Q52LW3	1261 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	ATAT1	Q5SQI0	421 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	MBNL2	Q5VZF2	373 aa	Known RBP	5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	ZNF790	Q6PG37	636 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	LILRA6	Q6PI73	481 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	TMC5	Q6UXY8	1006 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	CD300LD	Q6UXZ3	194 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	CATIP	Q7Z7H3	387 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	ATG4D	Q86TL0	474 aa	Predicted RBP	5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	RPAIN	Q86UA6	219 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	ZNF843	Q8N446	348 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	DTX3	Q8N9I9	347 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	CALML6	Q8TD86	181 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	CPA5	Q8WXQ8	436 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	SECISBP2L	Q93073	1101 aa	Known RBP	5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	HPS3	Q969F9	1004 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	LRIG1	Q96JA1	1093 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	TOX2	Q96NM4	488 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	BTBD2	Q9BX70	525 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	PITHD1	Q9GZP4	211 aa	Predicted RBP	5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	TMEM39B	Q9GZU3	492 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	SMOC2	Q9H3U7	446 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	MTG2	Q9H4K7	406 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	ZNF552	Q9H707	407 aa	Predicted RBP	5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	RCAN3	Q9UKA8	241 aa		5.51	□□□□□ -1.53
ECHDC1-223	ENST00000534442	FANCM	Q8IYD8	2048 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	PTPRQ	Q9UMZ3	2332 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442		A0A0A6YYJ9	748 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	HRK	O00198	91 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	RNMT	O43148	476 aa	Known RBP	5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	TPD52L2	O43399	206 aa	Known RBP	5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	KIN	O60870	393 aa	Known RBP	5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	OPHN1	O60890	802 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	OFD1	O75665	1012 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	IL18BP	O95998	194 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	GLI1	P08151	1106 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	TRIM27	P14373	513 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	CYP2C18	P33260	490 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	MC3R	P41968	323 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	GP2	P55259	537 aa	Known RBP	5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	BCAR1	P56945	870 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	CCT2	P78371	535 aa	Known RBP	5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	DLX2	Q07687	328 aa	Predicted RBP	5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	TNFAIP1	Q13829	316 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	STIL	Q15468	1287 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	SKIDA1	Q1XH10	827 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	TCEAL5	Q5H9L2	206 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	COLEC12	Q5KU26	742 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	SLC10A5	Q5PT55	438 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	ZMYM1	Q5SVZ6	1142 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	SYCP2L	Q5T4T6	812 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	PHF19	Q5T6S3	580 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	STRIP1	Q5VSL9	837 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	VASN	Q6EMK4	673 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	GADL1	Q6ZQY3	521 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	MIER2	Q8N344	545 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	RSAD2	Q8WXG1	361 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	CELF1	Q92879	486 aa	Known RBP	5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	NGRN	Q9NPE2	291 aa	Known RBP	5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	SAP30BP	Q9UHR5	308 aa	Known RBP	5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	EVL	Q9UI08	416 aa	Predicted RBP	5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	DNM3	Q9UQ16	869 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	CDY2A	Q9Y6F7	541 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	ARAP2	Q8WZ64	1704 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	RFX7	Q2KHR2	1363 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	ASXL3	Q9C0F0	2248 aa		5.5	□□□□□ -1.53
ECHDC1-223	ENST00000534442	XDH	P47989	1333 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	FRMPD2	Q68DX3	1309 aa	Predicted RBP	5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	DOPEY2	Q9Y3R5	2298 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	NUP98	P52948	1817 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442		A6NNZ2	444 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	PLIN1	O60240	522 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	MYB	P10242	640 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	ATF2	P15336	505 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	PDC	P20941	246 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	EDNRB	P24530	442 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	RGS2	P41220	211 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	IL13RA1	P78552	427 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	PURA	Q00577	322 aa	Known RBP	5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	PPARA	Q07869	468 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	SPIDR	Q14159	915 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	MFSD14C	Q5VZR4	134 aa		5.49	□□□□□ -1.53
ECHDC1-223	ENST00000534442	KANK2	Q63ZY3	851 aa		5.49	□□□□□ -1.53

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