RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 ITPR1Q14643 2758 aa3.46□□□□□ -1.85
CHMP4A-208ENST00000534106 IGF2RP11717 2491 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 AKAP13Q12802 2813 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 KMT2EQ8IZD2 1858 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 CDK5RAP2Q96SN8 1893 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 TRIP12Q14669 1992 aaPredicted RBP3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 TBKBP1A7MCY6 615 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 M0R2C6 588 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 MATN3O15232 486 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 SHOXO15266 292 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 PLA2G6O60733 806 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 IGSF3O75054 1194 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 CLASP2O75122 1294 aaKnown RBP3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 PPFIA4O75335 1185 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 FGF18O76093 207 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 GGPS1O95749 300 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 APPP05067 770 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 CENPBP07199 599 aaPredicted RBP3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 IMPDH2P12268 514 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 MYCLP12524 364 aaPredicted RBP3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 TNFRSF1AP19438 455 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 SLC9A5Q14940 896 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 UBE3CQ15386 1083 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 TMEM266Q2M3C6 531 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 SBK1Q52WX2 424 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 ANKRD39Q53RE8 183 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 AXDND1Q5T1B0 1012 aaPredicted RBP3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 SPOUT1Q5T280 376 aaKnown RBP3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 UTP14CQ5TAP6 766 aaKnown RBP3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 N4BP2L1Q5TBK1 243 aaPredicted RBP3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 KRTAP5-3Q6L8H2 238 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 TSSK4Q6SA08 328 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 TMC5Q6UXY8 1006 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 TMEM184AQ6ZMB5 413 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 LRRC55Q6ZSA7 311 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 FAM124AQ86V42 546 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 C1orf210Q8IVY1 113 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 SLITRK4Q8IW52 837 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 AMOTL1Q8IY63 956 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 TRMT2AQ8IZ69 625 aaKnown RBP3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 SLC16A11Q8NCK7 471 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 PPTC7Q8NI37 304 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 AUTS2Q8WXX7 1259 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 P2RX5Q93086 422 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 PPP2R3CQ969Q6 453 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 NOX5Q96PH1 765 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 RMDN3Q96TC7 470 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 SEC62Q99442 399 aaKnown RBP3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 SPON2Q9BUD6 331 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 NT5C1AQ9BXI3 368 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 SRRTQ9BXP5 876 aaKnown RBP3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 TMX1Q9H3N1 280 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 DLGAP2Q9P1A6 1054 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 MTF2Q9Y483 593 aaPredicted RBP3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 ZNF451Q9Y4E5 1061 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 FHOD1Q9Y613 1164 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 LOC400499M0QZD8 3231 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 COL11A1P12107 1806 aaPredicted RBP3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 FREM2Q5SZK8 3169 aa3.46□□□□□ -1.86
CHMP4A-208ENST00000534106 WDFY3Q8IZQ1 3526 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 MYH1P12882 1939 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 C2orf71A6NGG8 1288 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 NT5C1B-RDH14C9J2C7 533 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 MGEA5O60502 916 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 N4BP1O75113 896 aaKnown RBP3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 EIF3JO75822 258 aaKnown RBP3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 TOP3BO95985 862 aaKnown RBP3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 PLATP00750 562 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 LGALS2P05162 132 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 IFIT2P09913 472 aaKnown RBP3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 GLI4P10075 376 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 FGFR1P11362 822 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 EPCAMP16422 314 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 HOXC8P31273 242 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 HOXC13P31276 330 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 TDO2P48775 406 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 SEPHS1P49903 392 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 HMGA2P52926 109 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 SP4Q02446 784 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 CSTF1Q05048 431 aaKnown RBP3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 MGAT3Q09327 533 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 TDGQ13569 410 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 STXBP2Q15833 593 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 DPY19L1Q2PZI1 675 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 NAALADL2Q58DX5 795 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 FBXO47Q5MNV8 452 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 ATAT1Q5SQI0 421 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 CELF3Q5SZQ8 465 aaKnown RBP3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 ARHGEF16Q5VV41 709 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 TSHZ3Q63HK5 1081 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 BORAQ6PGQ7 559 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 GLB1LQ6UWU2 654 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 BTNL9Q6UXG8 535 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 ADAT2Q7Z6V5 191 aaKnown RBP3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 PPFIBP1Q86W92 1011 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 ZNF761Q86XN6 746 aaPredicted RBP3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 CPNE8Q86YQ8 564 aa3.45□□□□□ -1.86
CHMP4A-208ENST00000534106 THNSL1Q8IYQ7 743 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms