RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 CFAP97Q9P2B7 532 aa3.92□□□□□ -1.78
BRCA2-205ENST00000533776 MRFAP1Q9Y605 127 aa3.92□□□□□ -1.78
BRCA2-205ENST00000533776 CFAP20Q9Y6A4 193 aaKnown RBP3.92□□□□□ -1.78
BRCA2-205ENST00000533776 SMIM22K7EJ46 135 aa3.91□□□□□ -1.78
BRCA2-205ENST00000533776 IGSF3O75054 1194 aa3.91□□□□□ -1.78
BRCA2-205ENST00000533776 CHEK2O96017 543 aa3.91□□□□□ -1.78
BRCA2-205ENST00000533776 PDHA1P08559 390 aa3.91□□□□□ -1.78
BRCA2-205ENST00000533776 KELP23276 732 aa3.91□□□□□ -1.78
BRCA2-205ENST00000533776 SMARCA1P28370 1054 aa3.91□□□□□ -1.78
BRCA2-205ENST00000533776 CYP2C19P33261 490 aa3.91□□□□□ -1.78
BRCA2-205ENST00000533776 PIK3CGP48736 1102 aa3.91□□□□□ -1.78
BRCA2-205ENST00000533776 DSC2Q02487 901 aa3.91□□□□□ -1.78
BRCA2-205ENST00000533776 HABP2Q14520 560 aaPredicted RBP3.91□□□□□ -1.78
BRCA2-205ENST00000533776 ETFDHQ16134 617 aa3.91□□□□□ -1.78
BRCA2-205ENST00000533776 PROSER3Q2NL68 480 aa3.91□□□□□ -1.78
BRCA2-205ENST00000533776 VPS53Q5VIR6 699 aa3.91□□□□□ -1.78
BRCA2-205ENST00000533776 CEP85Q6P2H3 762 aa3.91□□□□□ -1.78
BRCA2-205ENST00000533776 ZNF66Q6ZN08 573 aa3.91□□□□□ -1.78
BRCA2-205ENST00000533776 PNMA8AQ86V59 439 aaPredicted RBP3.91□□□□□ -1.78
BRCA2-205ENST00000533776 MTMR8Q96EF0 704 aa3.91□□□□□ -1.78
BRCA2-205ENST00000533776 GPR35Q9HC97 309 aa3.91□□□□□ -1.78
BRCA2-205ENST00000533776 SERHLQ9NQF3 203 aa3.91□□□□□ -1.78
BRCA2-205ENST00000533776 ARHGEF3Q9NR81 526 aa3.91□□□□□ -1.78
BRCA2-205ENST00000533776 SERTAD4Q9NUC0 356 aa3.91□□□□□ -1.78
BRCA2-205ENST00000533776 RLIMQ9NVW2 624 aa3.91□□□□□ -1.78
BRCA2-205ENST00000533776 SIDT1Q9NXL6 827 aaKnown RBP3.91□□□□□ -1.78
BRCA2-205ENST00000533776 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.91□□□□□ -1.78
BRCA2-205ENST00000533776 CACNA1IQ9P0X4 2223 aa3.91□□□□□ -1.78
BRCA2-205ENST00000533776 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.9□□□□□ -1.79
BRCA2-205ENST00000533776 SHTN1A0MZ66 631 aa3.9□□□□□ -1.79
BRCA2-205ENST00000533776 M0QYG6 137 aa3.9□□□□□ -1.79
BRCA2-205ENST00000533776 FZD9O00144 591 aa3.9□□□□□ -1.79
BRCA2-205ENST00000533776 SOAT2O75908 522 aa3.9□□□□□ -1.79
BRCA2-205ENST00000533776 NXPH3O95157 252 aa3.9□□□□□ -1.79
BRCA2-205ENST00000533776 CYP2D6P10635 497 aa3.9□□□□□ -1.79
BRCA2-205ENST00000533776 JUPP14923 745 aa3.9□□□□□ -1.79
BRCA2-205ENST00000533776 SSBP2P81877 361 aaPredicted RBP3.9□□□□□ -1.79
BRCA2-205ENST00000533776 ITKQ08881 620 aa3.9□□□□□ -1.79
BRCA2-205ENST00000533776 MTMR1Q13613 665 aa3.9□□□□□ -1.79
BRCA2-205ENST00000533776 YTHDF3Q7Z739 585 aaKnown RBP3.9□□□□□ -1.79
BRCA2-205ENST00000533776 ATRIPQ8WXE1 791 aa3.9□□□□□ -1.79
BRCA2-205ENST00000533776 RPL36ALQ969Q0 106 aaKnown RBP3.9□□□□□ -1.79
BRCA2-205ENST00000533776 SH2D3AQ9BRG2 576 aa3.9□□□□□ -1.79
BRCA2-205ENST00000533776 KRTAP2-2Q9BYT5 123 aa3.9□□□□□ -1.79
BRCA2-205ENST00000533776 TINAGL1Q9GZM7 467 aaPredicted RBP3.9□□□□□ -1.79
BRCA2-205ENST00000533776 CCDC8Q9H0W5 538 aaPredicted RBP3.9□□□□□ -1.79
BRCA2-205ENST00000533776 NRIP3Q9NQ35 241 aa3.9□□□□□ -1.79
BRCA2-205ENST00000533776 ATP8A1Q9Y2Q0 1164 aa3.9□□□□□ -1.79
BRCA2-205ENST00000533776 PCDHA3Q9Y5H8 950 aa3.9□□□□□ -1.79
BRCA2-205ENST00000533776 RAD54BQ9Y620 910 aa3.9□□□□□ -1.79
BRCA2-205ENST00000533776 PRSS29PA6NIE9 313 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 H0YIZ8 118 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 PPM1DO15297 605 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 JTBO76095 146 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 LATS1O95835 1130 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 FAM163BP0C2L3 166 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 NHLRC4P0CG21 123 aaPredicted RBP3.89□□□□□ -1.79
BRCA2-205ENST00000533776 RARBP10826 455 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 PRDX5P30044 214 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 PTGER1P34995 402 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 GCLCP48506 637 aaPredicted RBP3.89□□□□□ -1.79
BRCA2-205ENST00000533776 TOB1P50616 345 aaPredicted RBP3.89□□□□□ -1.79
BRCA2-205ENST00000533776 CLCN2P51788 898 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 GUCY2FP51841 1108 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 ADKP55263 362 aaKnown RBP3.89□□□□□ -1.79
BRCA2-205ENST00000533776 TUBA4AP68366 448 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 MAPK7Q13164 816 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 KIF22Q14807 665 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 SLC44A4Q53GD3 710 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 TEDDM1Q5T9Z0 273 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 EFCAB2Q5VUJ9 269 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 C11orf87Q6NUJ2 197 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 SLC29A4Q7RTT9 530 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 NEK8Q86SG6 692 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 FAM109AQ8N4B1 249 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 FANCBQ8NB91 859 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 C3orf20Q8ND61 904 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 TNPO1Q92973 898 aaKnown RBP3.89□□□□□ -1.79
BRCA2-205ENST00000533776 ZBTB9Q96C00 473 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 REPS1Q96D71 796 aa3.89□□□□□ -1.79
BRCA2-205ENST00000533776 TISP43B9A030 160 aa3.88□□□□□ -1.79
BRCA2-205ENST00000533776 GABRDO14764 452 aa3.88□□□□□ -1.79
BRCA2-205ENST00000533776 ZNF213O14771 459 aa3.88□□□□□ -1.79
BRCA2-205ENST00000533776 KATNA1O75449 491 aa3.88□□□□□ -1.79
BRCA2-205ENST00000533776 BMP15O95972 392 aa3.88□□□□□ -1.79
BRCA2-205ENST00000533776 IGKV2-30P06310 120 aa3.88□□□□□ -1.79
BRCA2-205ENST00000533776 CERS1P27544 350 aa3.88□□□□□ -1.79
BRCA2-205ENST00000533776 ALDH9A1P49189 494 aa3.88□□□□□ -1.79
BRCA2-205ENST00000533776 BOP1Q14137 746 aaKnown RBP3.88□□□□□ -1.79
BRCA2-205ENST00000533776 FAM50AQ14320 339 aaKnown RBP3.88□□□□□ -1.79
BRCA2-205ENST00000533776 ODF1Q14990 250 aa3.88□□□□□ -1.79
BRCA2-205ENST00000533776 PTPN21Q16825 1174 aa3.88□□□□□ -1.79
BRCA2-205ENST00000533776 SUPT20HL1Q3ZLR7 823 aa3.88□□□□□ -1.79
BRCA2-205ENST00000533776 CEP78Q5JTW2 689 aa3.88□□□□□ -1.79
BRCA2-205ENST00000533776 ZNF618Q5T7W0 954 aa3.88□□□□□ -1.79
BRCA2-205ENST00000533776 PRAMEF17Q5VTA0 474 aa3.88□□□□□ -1.79
BRCA2-205ENST00000533776 EGFLAMQ63HQ2 1017 aa3.88□□□□□ -1.79
BRCA2-205ENST00000533776 TMEM108Q6UXF1 575 aa3.88□□□□□ -1.79
BRCA2-205ENST00000533776 FAM90A1Q86YD7 464 aa3.88□□□□□ -1.79
BRCA2-205ENST00000533776 FAM46DQ8NEK8 389 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms