RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 STOML2Q9UJZ1 356 aa8.18□□□□□ -1.1
CSRP1-218ENST00000533402 CCDC162PA2VCL2 907 aa8.18□□□□□ -1.1
CSRP1-218ENST00000533402 FESP07332 822 aa8.18□□□□□ -1.1
CSRP1-218ENST00000533402 CCND2P30279 289 aa8.18□□□□□ -1.1
CSRP1-218ENST00000533402 CRKLP46109 303 aaKnown RBP8.18□□□□□ -1.1
CSRP1-218ENST00000533402 MXI1P50539 228 aa8.18□□□□□ -1.1
CSRP1-218ENST00000533402 VEPH1Q14D04 833 aa8.18□□□□□ -1.1
CSRP1-218ENST00000533402 GSTA3Q16772 222 aa8.18□□□□□ -1.1
CSRP1-218ENST00000533402 C15orf59Q2T9L4 293 aaPredicted RBP8.18□□□□□ -1.1
CSRP1-218ENST00000533402 TTC27Q6P3X3 843 aa8.18□□□□□ -1.1
CSRP1-218ENST00000533402 ZBTB49Q6ZSB9 765 aa8.18□□□□□ -1.1
CSRP1-218ENST00000533402 C1orf54Q8WWF1 131 aa8.18□□□□□ -1.1
CSRP1-218ENST00000533402 RBM15Q96T37 977 aaKnown RBP eCLIP8.18□□□□□ -1.1
CSRP1-218ENST00000533402 PACSIN1Q9BY11 444 aa8.18□□□□□ -1.1
CSRP1-218ENST00000533402 KIAA1024Q9UPX6 916 aa8.18□□□□□ -1.1
CSRP1-218ENST00000533402 AKT3Q9Y243 479 aa8.18□□□□□ -1.1
CSRP1-218ENST00000533402 GDAQ9Y2T3 454 aa8.18□□□□□ -1.1
CSRP1-218ENST00000533402 GPC6Q9Y625 555 aaPredicted RBP8.18□□□□□ -1.1
CSRP1-218ENST00000533402 AK5Q9Y6K8 562 aa8.18□□□□□ -1.1
CSRP1-218ENST00000533402 FBLN1P23142 703 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 EPHB2P29323 1055 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 FBXW4P57775 412 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 NEK5Q6P3R8 708 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 SYDE1Q6ZW31 735 aaPredicted RBP8.17□□□□□ -1.1
CSRP1-218ENST00000533402 REXO1L1PQ8IX06 675 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 ANKZF1Q9H8Y5 726 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 PCDH12Q9NPG4 1184 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 ENTPD7Q9NQZ7 604 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 FBXO28Q9NVF7 368 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 ZNF446Q9NWS9 450 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 MYOM1P52179 1685 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 TTLL1O95922 423 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 MMP1P03956 469 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 NCKAP1LP55160 1127 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 CSTF3Q12996 717 aaKnown RBP8.17□□□□□ -1.1
CSRP1-218ENST00000533402 MPP3Q13368 585 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 FAAH2Q6GMR7 532 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 C4orf50Q6ZRC1 276 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 PRUNE1Q86TP1 453 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 OTUD5Q96G74 571 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 TMEM237Q96Q45 408 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 TEKT3Q9BXF9 490 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 ZNF556Q9HAH1 456 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 ATPIF1Q9UII2 106 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 WBP11Q9Y2W2 641 aaKnown RBP8.17□□□□□ -1.1
CSRP1-218ENST00000533402 MED23Q9ULK4 1368 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 NOTOA8MTQ0 251 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 TPST1O60507 370 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 DDAH1O94760 285 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 MEI1Q5TIA1 1274 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 DDIASQ8IXT1 998 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 TC2NQ8N9U0 490 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 FNIP1Q8TF40 1166 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 BORCS5Q969J3 196 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 EDC3Q96F86 508 aaKnown RBP8.17□□□□□ -1.1
CSRP1-218ENST00000533402 FAM167AQ96KS9 214 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 EPB41L4AQ9HCS5 686 aaPredicted RBP8.17□□□□□ -1.1
CSRP1-218ENST00000533402 RSL24D1Q9UHA3 163 aaKnown RBP8.17□□□□□ -1.1
CSRP1-218ENST00000533402 DDX25Q9UHL0 483 aaKnown RBP8.17□□□□□ -1.1
CSRP1-218ENST00000533402 TRIM49BA6NDI0 452 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 SPDYE5A6NIY4 337 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 PHF2O75151 1096 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 SLC5A9Q2M3M2 681 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 FAM83BQ5T0W9 1011 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 ZNF280DQ6N043 979 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 PCDHA1Q9Y5I3 950 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 ITIH2P19823 946 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 NAA20P61599 178 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 BNC1Q01954 994 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 OVGP1Q12889 678 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 TSTA3Q13630 321 aaPredicted RBP8.17□□□□□ -1.1
CSRP1-218ENST00000533402 IKBIPQ70UQ0 350 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 BTBD10Q9BSF8 475 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 SHCBP1LQ9BZQ2 653 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 DNAJC12Q9UKB3 198 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 A0A1B0GTH6 734 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 VAV1P15498 845 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 PMLP29590 882 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 TTKP33981 857 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 NUP62P37198 522 aaPredicted RBP8.17□□□□□ -1.1
CSRP1-218ENST00000533402 ZMYM1Q5SVZ6 1142 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 RAD9BQ6WBX8 426 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 RHPN2Q8IUC4 686 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 ARID3BQ8IVW6 561 aaPredicted RBP8.17□□□□□ -1.1
CSRP1-218ENST00000533402 RNF139Q8WU17 664 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 MMTAG2Q9BU76 263 aaKnown RBP8.17□□□□□ -1.1
CSRP1-218ENST00000533402 GCOM2Q9BZD3 368 aaPredicted RBP8.17□□□□□ -1.1
CSRP1-218ENST00000533402 LTN1O94822 1766 aa8.17□□□□□ -1.1
CSRP1-218ENST00000533402 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.16□□□□□ -1.1
CSRP1-218ENST00000533402 ALAS1P13196 640 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 ZNF23P17027 643 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 USP46P62068 366 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 POU5F1BQ06416 359 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 RAD51Q06609 339 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 LPIN1Q14693 890 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 HAUS6Q7Z4H7 955 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 TTC30AQ86WT1 665 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 DGCR14Q96DF8 476 aaKnown RBP8.16□□□□□ -1.1
CSRP1-218ENST00000533402 USP44Q9H0E7 712 aa8.16□□□□□ -1.1
CSRP1-218ENST00000533402 PABPC3Q9H361 631 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms