RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 DUSP4Q13115 394 aa10.56□□□□□ -0.72
NUP98-220ENST00000533346 ADAM9Q13443 819 aa10.56□□□□□ -0.72
NUP98-220ENST00000533346 CFAP221Q4G0U5 840 aa10.56□□□□□ -0.72
NUP98-220ENST00000533346 PABPC1LQ4VXU2 614 aaKnown RBP10.56□□□□□ -0.72
NUP98-220ENST00000533346 INTS6LQ5JSJ4 861 aaKnown RBP10.56□□□□□ -0.72
NUP98-220ENST00000533346 C1orf220Q5T0J3 134 aa10.56□□□□□ -0.72
NUP98-220ENST00000533346 IQCEQ6IPM2 695 aa10.56□□□□□ -0.72
NUP98-220ENST00000533346 LRRTM3Q86VH5 581 aa10.56□□□□□ -0.72
NUP98-220ENST00000533346 ADSSL1Q8N142 457 aa10.56□□□□□ -0.72
NUP98-220ENST00000533346 ELMOD1Q8N336 334 aa10.56□□□□□ -0.72
NUP98-220ENST00000533346 KBTBD7Q8WVZ9 684 aa10.56□□□□□ -0.72
NUP98-220ENST00000533346 FGF13Q92913 245 aa10.56□□□□□ -0.72
NUP98-220ENST00000533346 SMARCE1Q969G3 411 aa10.56□□□□□ -0.72
NUP98-220ENST00000533346 PSMG2Q969U7 264 aa10.56□□□□□ -0.72
NUP98-220ENST00000533346 SYAP1Q96A49 352 aaPredicted RBP10.56□□□□□ -0.72
NUP98-220ENST00000533346 CCDC127Q96BQ5 260 aa10.56□□□□□ -0.72
NUP98-220ENST00000533346 DHTKD1Q96HY7 919 aaPredicted RBP10.56□□□□□ -0.72
NUP98-220ENST00000533346 ZNF512Q96ME7 567 aaPredicted RBP10.56□□□□□ -0.72
NUP98-220ENST00000533346 TMEM209Q96SK2 561 aa10.56□□□□□ -0.72
NUP98-220ENST00000533346 DNAJC25Q9H1X3 360 aa10.56□□□□□ -0.72
NUP98-220ENST00000533346 KCNH6Q9H252 994 aa10.56□□□□□ -0.72
NUP98-220ENST00000533346 FAM124BQ9H5Z6 455 aaPredicted RBP10.56□□□□□ -0.72
NUP98-220ENST00000533346 DDX43Q9NXZ2 648 aaKnown RBP10.56□□□□□ -0.72
NUP98-220ENST00000533346 LIMD1Q9UGP4 676 aa10.56□□□□□ -0.72
NUP98-220ENST00000533346 ZMYM5Q9UJ78 669 aa10.56□□□□□ -0.72
NUP98-220ENST00000533346 CDH9Q9ULB4 789 aa10.56□□□□□ -0.72
NUP98-220ENST00000533346 DUSP12Q9UNI6 340 aa10.56□□□□□ -0.72
NUP98-220ENST00000533346 HCN4Q9Y3Q4 1203 aa10.56□□□□□ -0.72
NUP98-220ENST00000533346 R3HCC1Q9Y3T6 440 aaKnown RBP10.56□□□□□ -0.72
NUP98-220ENST00000533346 YIPF1Q9Y548 306 aa10.56□□□□□ -0.72
NUP98-220ENST00000533346 OBSL1O75147 1896 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 MOSPD3O75425 235 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 AKAP3O75969 853 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 OR4Q2P0C623 313 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 GBP2P32456 591 aaPredicted RBP10.55□□□□□ -0.72
NUP98-220ENST00000533346 MAGEA11P43364 429 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 VAMP7P51809 220 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 EPHB3P54753 998 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 FKBP3Q00688 224 aaKnown RBP10.55□□□□□ -0.72
NUP98-220ENST00000533346 TSPY1Q01534 308 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 TWF1Q12792 350 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 BFSP1Q12934 665 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 HTR4Q13639 388 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 MAPRE1Q15691 268 aaKnown RBP10.55□□□□□ -0.72
NUP98-220ENST00000533346 SGSM1Q2NKQ1 1148 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 CYP4A22Q5TCH4 519 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 TDRD10Q5VZ19 366 aaKnown RBP10.55□□□□□ -0.72
NUP98-220ENST00000533346 LMBRD2Q68DH5 695 aaPredicted RBP10.55□□□□□ -0.72
NUP98-220ENST00000533346 MTSS1LQ765P7 747 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 SV2AQ7L0J3 742 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 ITIH5Q86UX2 942 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 OSTM1Q86WC4 334 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 TMC8Q8IU68 726 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 NPAS3Q8IXF0 933 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 ADGRF2Q8IZF7 708 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 SLC44A3Q8N4M1 653 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 TRIML1Q8N9V2 468 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 ATAD1Q8NBU5 361 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 TRPV4Q9HBA0 871 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 SLC2A4RGQ9NR83 387 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 TSHZ2Q9NRE2 1034 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 HCFC1R1Q9NWW0 138 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 WNT16Q9UBV4 365 aa10.55□□□□□ -0.72
NUP98-220ENST00000533346 CETN3O15182 167 aa10.54□□□□□ -0.72
NUP98-220ENST00000533346 PMM2O15305 246 aa10.54□□□□□ -0.72
NUP98-220ENST00000533346 SLC16A3O15427 465 aaKnown RBP10.54□□□□□ -0.72
NUP98-220ENST00000533346 ECI2O75521 394 aa10.54□□□□□ -0.72
NUP98-220ENST00000533346 VNN1O95497 513 aa10.54□□□□□ -0.72
NUP98-220ENST00000533346 ASS1P00966 412 aaKnown RBP10.54□□□□□ -0.72
NUP98-220ENST00000533346 CCNE1P24864 410 aa10.54□□□□□ -0.72
NUP98-220ENST00000533346 ALDH1A3P47895 512 aa10.54□□□□□ -0.72
NUP98-220ENST00000533346 NUBP1P53384 320 aa10.54□□□□□ -0.72
NUP98-220ENST00000533346 DLG4P78352 724 aa10.54□□□□□ -0.72
NUP98-220ENST00000533346 NTHL1P78549 312 aa10.54□□□□□ -0.72
NUP98-220ENST00000533346 TRPC3Q13507 836 aa10.54□□□□□ -0.72
NUP98-220ENST00000533346 MORC3Q14149 939 aa10.54□□□□□ -0.72
NUP98-220ENST00000533346 SLC5A9Q2M3M2 681 aa10.54□□□□□ -0.72
NUP98-220ENST00000533346 WDR72Q3MJ13 1102 aa10.54□□□□□ -0.72
NUP98-220ENST00000533346 SLC39A12Q504Y0 691 aa10.54□□□□□ -0.72
NUP98-220ENST00000533346 POTEHQ6S545 545 aa10.54□□□□□ -0.72
NUP98-220ENST00000533346 PDZD4Q76G19 769 aaPredicted RBP10.54□□□□□ -0.72
NUP98-220ENST00000533346 GET4Q7L5D6 327 aaPredicted RBP10.54□□□□□ -0.72
NUP98-220ENST00000533346 DNAJB7Q7Z6W7 309 aaPredicted RBP10.54□□□□□ -0.72
NUP98-220ENST00000533346 KMT2EQ8IZD2 1858 aa10.54□□□□□ -0.72
NUP98-220ENST00000533346 ITFG1Q8TB96 612 aa10.54□□□□□ -0.72
NUP98-220ENST00000533346 NOC3LQ8WTT2 800 aaKnown RBP10.54□□□□□ -0.72
NUP98-220ENST00000533346 MYRFLQ96LU7 910 aa10.54□□□□□ -0.72
NUP98-220ENST00000533346 PGLYRP2Q96PD5 576 aa10.54□□□□□ -0.72
NUP98-220ENST00000533346 MAN1B1Q9UKM7 699 aa10.54□□□□□ -0.72
NUP98-220ENST00000533346 MAPK8IP1Q9UQF2 711 aa10.54□□□□□ -0.72
NUP98-220ENST00000533346 MRPS23Q9Y3D9 190 aaKnown RBP10.54□□□□□ -0.72
NUP98-220ENST00000533346 PCDHB5Q9Y5E4 795 aa10.54□□□□□ -0.72
NUP98-220ENST00000533346 ANAPC1Q9H1A4 1944 aa10.54□□□□□ -0.72
NUP98-220ENST00000533346 TMEM221A6NGB7 291 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 PPP1R3GB7ZBB8 358 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 M0R296 226 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 ASGR2P07307 311 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 SRFP11831 508 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 KRT13P13646 458 aa10.53□□□□□ -0.72
NUP98-220ENST00000533346 ATF6P18850 670 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms