RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 DCP1BQ8IZD4 617 aaKnown RBP21.92■■□□□ 1.1
CCS-208ENST00000533244 TTC9BQ8N6N2 239 aa21.92■■□□□ 1.1
CCS-208ENST00000533244 MYADMQ96S97 322 aa21.92■■□□□ 1.1
CCS-208ENST00000533244 DUSP9Q99956 384 aaKnown RBP21.92■■□□□ 1.1
CCS-208ENST00000533244 TMLHEQ9NVH6 421 aa21.92■■□□□ 1.1
CCS-208ENST00000533244 CEP72Q9P209 647 aa21.92■■□□□ 1.1
CCS-208ENST00000533244 MUTYHQ9UIF7 546 aa21.92■■□□□ 1.1
CCS-208ENST00000533244 POLIQ9UNA4 740 aa21.92■■□□□ 1.1
CCS-208ENST00000533244 DCXO43602 365 aa21.91■■□□□ 1.1
CCS-208ENST00000533244 EPB41P11171 864 aaKnown RBP21.91■■□□□ 1.1
CCS-208ENST00000533244 FSHRP23945 695 aa21.91■■□□□ 1.1
CCS-208ENST00000533244 GTF2H1P32780 548 aa21.91■■□□□ 1.1
CCS-208ENST00000533244 TSPY1Q01534 308 aa21.91■■□□□ 1.1
CCS-208ENST00000533244 ZNF699Q32M78 642 aa21.91■■□□□ 1.1
CCS-208ENST00000533244 PABPC1LQ4VXU2 614 aaKnown RBP21.91■■□□□ 1.1
CCS-208ENST00000533244 SPPL2BQ8TCT7 592 aa21.91■■□□□ 1.1
CCS-208ENST00000533244 DNAJC25Q9H1X3 360 aa21.91■■□□□ 1.1
CCS-208ENST00000533244 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.91■■□□□ 1.1
CCS-208ENST00000533244 EPS15L1Q9UBC2 864 aa21.91■■□□□ 1.1
CCS-208ENST00000533244 HCRTO43612 131 aa21.9■■□□□ 1.1
CCS-208ENST00000533244 ASS1P00966 412 aaKnown RBP21.9■■□□□ 1.1
CCS-208ENST00000533244 RHOP08100 348 aa21.9■■□□□ 1.1
CCS-208ENST00000533244 PTPN2P17706 415 aa21.9■■□□□ 1.1
CCS-208ENST00000533244 ACAT1P24752 427 aaKnown RBP21.9■■□□□ 1.1
CCS-208ENST00000533244 PCSK1P29120 753 aa21.9■■□□□ 1.1
CCS-208ENST00000533244 TNNC1P63316 161 aa21.9■■□□□ 1.1
CCS-208ENST00000533244 PLD1Q13393 1074 aa21.9■■□□□ 1.1
CCS-208ENST00000533244 GET4Q7L5D6 327 aaPredicted RBP21.9■■□□□ 1.1
CCS-208ENST00000533244 NELFBQ8WX92 580 aa21.9■■□□□ 1.1
CCS-208ENST00000533244 TAF4BQ92750 862 aa21.9■■□□□ 1.1
CCS-208ENST00000533244 CEP63Q96MT8 703 aa21.9■■□□□ 1.1
CCS-208ENST00000533244 MMS19Q96T76 1030 aa21.9■■□□□ 1.1
CCS-208ENST00000533244 MRPL45Q9BRJ2 306 aaKnown RBP21.9■■□□□ 1.1
CCS-208ENST00000533244 EPHX3Q9H6B9 360 aa21.9■■□□□ 1.1
CCS-208ENST00000533244 SLC27A5Q9Y2P5 690 aa21.9■■□□□ 1.1
CCS-208ENST00000533244 NME7Q9Y5B8 376 aa21.9■■□□□ 1.1
CCS-208ENST00000533244 HLA-DRAP01903 254 aa21.89■■□□□ 1.1
CCS-208ENST00000533244 ALADP13716 330 aa21.89■■□□□ 1.1
CCS-208ENST00000533244 LMO2P25791 158 aa21.89■■□□□ 1.1
CCS-208ENST00000533244 GCLMP48507 274 aa21.89■■□□□ 1.1
CCS-208ENST00000533244 EPHA5P54756 1037 aa21.89■■□□□ 1.1
CCS-208ENST00000533244 NFE2Q16621 373 aaPredicted RBP21.89■■□□□ 1.1
CCS-208ENST00000533244 PTPN21Q16825 1174 aa21.89■■□□□ 1.1
CCS-208ENST00000533244 SGSM1Q2NKQ1 1148 aa21.89■■□□□ 1.1
CCS-208ENST00000533244 KLHL10Q6JEL2 608 aa21.89■■□□□ 1.1
CCS-208ENST00000533244 FAM171BQ6P995 826 aa21.89■■□□□ 1.1
CCS-208ENST00000533244 TMEM8AQ9HCN3 771 aa21.89■■□□□ 1.1
CCS-208ENST00000533244 CDH9Q9ULB4 789 aa21.89■■□□□ 1.1
CCS-208ENST00000533244 ZFP37Q9Y6Q3 630 aaPredicted RBP21.89■■□□□ 1.1
CCS-208ENST00000533244 BICDL2A1A5D9 508 aa21.89■■□□□ 1.09
CCS-208ENST00000533244 GBP2P32456 591 aaPredicted RBP21.89■■□□□ 1.09
CCS-208ENST00000533244 TUFMP49411 452 aaKnown RBP21.89■■□□□ 1.09
CCS-208ENST00000533244 PAK1Q13153 545 aa21.89■■□□□ 1.09
CCS-208ENST00000533244 SLC5A9Q2M3M2 681 aa21.89■■□□□ 1.09
CCS-208ENST00000533244 ZNF667Q5HYK9 610 aa21.89■■□□□ 1.09
CCS-208ENST00000533244 PRSS36Q5K4E3 855 aa21.89■■□□□ 1.09
CCS-208ENST00000533244 ELMOD1Q8N336 334 aa21.89■■□□□ 1.09
CCS-208ENST00000533244 ITFG1Q8TB96 612 aa21.89■■□□□ 1.09
CCS-208ENST00000533244 TAS1R2Q8TE23 839 aa21.89■■□□□ 1.09
CCS-208ENST00000533244 SYT15Q9BQS2 421 aa21.89■■□□□ 1.09
CCS-208ENST00000533244 ABCB6Q9NP58 842 aa21.89■■□□□ 1.09
CCS-208ENST00000533244 NXF1Q9UBU9 619 aaKnown RBP21.89■■□□□ 1.09
CCS-208ENST00000533244 LIMD1Q9UGP4 676 aa21.89■■□□□ 1.09
CCS-208ENST00000533244 CTNND2Q9UQB3 1225 aa21.89■■□□□ 1.09
CCS-208ENST00000533244 PCDHB5Q9Y5E4 795 aa21.89■■□□□ 1.09
CCS-208ENST00000533244 HAPLN1P10915 354 aaPredicted RBP21.88■■□□□ 1.09
CCS-208ENST00000533244 LAMP2P13473 410 aa21.88■■□□□ 1.09
CCS-208ENST00000533244 ATF6P18850 670 aa21.88■■□□□ 1.09
CCS-208ENST00000533244 PIK3CAP42336 1068 aa21.88■■□□□ 1.09
CCS-208ENST00000533244 CCDC142Q17RM4 750 aa21.88■■□□□ 1.09
CCS-208ENST00000533244 KRT39Q6A163 491 aa21.88■■□□□ 1.09
CCS-208ENST00000533244 FILIP1Q7Z7B0 1213 aa21.88■■□□□ 1.09
CCS-208ENST00000533244 LEMD2Q8NC56 503 aa21.88■■□□□ 1.09
CCS-208ENST00000533244 ZNF512Q96ME7 567 aaPredicted RBP21.88■■□□□ 1.09
CCS-208ENST00000533244 CORO1BQ9BR76 489 aa21.88■■□□□ 1.09
CCS-208ENST00000533244 LRRC3Q9BY71 257 aa21.88■■□□□ 1.09
CCS-208ENST00000533244 NUP62CLQ9H1M0 184 aa21.88■■□□□ 1.09
CCS-208ENST00000533244 SMYD3Q9H7B4 428 aa21.88■■□□□ 1.09
CCS-208ENST00000533244 ABI2Q9NYB9 513 aaPredicted RBP21.88■■□□□ 1.09
CCS-208ENST00000533244 GTF3C4Q9UKN8 822 aa21.88■■□□□ 1.09
CCS-208ENST00000533244 CDH7Q9ULB5 785 aa21.88■■□□□ 1.09
CCS-208ENST00000533244 ASB3Q9Y575 518 aa21.88■■□□□ 1.09
CCS-208ENST00000533244 TRIOO75962 3097 aa21.87■■□□□ 1.09
CCS-208ENST00000533244 MYO10Q9HD67 2058 aa21.87■■□□□ 1.09
CCS-208ENST00000533244 MYBPHLA2RUH7 354 aa21.87■■□□□ 1.09
CCS-208ENST00000533244 STX10O60499 249 aa21.87■■□□□ 1.09
CCS-208ENST00000533244 SOAT2O75908 522 aa21.87■■□□□ 1.09
CCS-208ENST00000533244 MICAL2O94851 1124 aa21.87■■□□□ 1.09
CCS-208ENST00000533244 ALDH1A3P47895 512 aa21.87■■□□□ 1.09
CCS-208ENST00000533244 EPHB3P54753 998 aa21.87■■□□□ 1.09
CCS-208ENST00000533244 CFAP221Q4G0U5 840 aa21.87■■□□□ 1.09
CCS-208ENST00000533244 IQCEQ6IPM2 695 aa21.87■■□□□ 1.09
CCS-208ENST00000533244 TMC8Q8IU68 726 aa21.87■■□□□ 1.09
CCS-208ENST00000533244 GPT2Q8TD30 523 aa21.87■■□□□ 1.09
CCS-208ENST00000533244 FGF13Q92913 245 aa21.87■■□□□ 1.09
CCS-208ENST00000533244 PSMG2Q969U7 264 aa21.87■■□□□ 1.09
CCS-208ENST00000533244 SLC35C1Q96A29 364 aa21.87■■□□□ 1.09
CCS-208ENST00000533244 ELMO3Q96BJ8 720 aa21.87■■□□□ 1.09
CCS-208ENST00000533244 FUBP3Q96I24 572 aaKnown RBP eCLIP21.87■■□□□ 1.09
CCS-208ENST00000533244 SEPT5Q99719 369 aaPredicted RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms