RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 PCDHB5Q9Y5E4 795 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 RASA4BC9J798 803 aa11.21□□□□□ -0.61
COLCA1-203ENST00000532918 RASA4O43374 803 aa11.21□□□□□ -0.61
COLCA1-203ENST00000532918 SERPIND1P05546 499 aa11.21□□□□□ -0.61
COLCA1-203ENST00000532918 IGFBP4P22692 258 aa11.21□□□□□ -0.61
COLCA1-203ENST00000532918 ANTXR2P58335 489 aa11.21□□□□□ -0.61
COLCA1-203ENST00000532918 DPYDQ12882 1025 aa11.21□□□□□ -0.61
COLCA1-203ENST00000532918 ZC2HC1CQ53FD0 456 aaPredicted RBP11.21□□□□□ -0.61
COLCA1-203ENST00000532918 PPM1LQ5SGD2 360 aa11.21□□□□□ -0.61
COLCA1-203ENST00000532918 LINC00523Q86TU6 105 aa11.21□□□□□ -0.61
COLCA1-203ENST00000532918 DHX40Q8IX18 779 aaKnown RBP11.21□□□□□ -0.61
COLCA1-203ENST00000532918 TRAIPQ9BWF2 469 aa11.21□□□□□ -0.61
COLCA1-203ENST00000532918 SENP6Q9GZR1 1112 aaPredicted RBP11.21□□□□□ -0.61
COLCA1-203ENST00000532918 CYP3A43Q9HB55 503 aa11.21□□□□□ -0.61
COLCA1-203ENST00000532918 KIAA1210Q9ULL0 1709 aa11.21□□□□□ -0.61
COLCA1-203ENST00000532918 WEE2P0C1S8 567 aa11.21□□□□□ -0.61
COLCA1-203ENST00000532918 MYL4P12829 197 aa11.21□□□□□ -0.61
COLCA1-203ENST00000532918 GUCY2CP25092 1073 aa11.21□□□□□ -0.61
COLCA1-203ENST00000532918 ARSEP51690 589 aa11.21□□□□□ -0.61
COLCA1-203ENST00000532918 PGM5Q15124 567 aa11.21□□□□□ -0.61
COLCA1-203ENST00000532918 IZUMO3Q5VZ72 239 aa11.21□□□□□ -0.61
COLCA1-203ENST00000532918 NAPEPLDQ6IQ20 393 aa11.21□□□□□ -0.61
COLCA1-203ENST00000532918 CCDC137Q6PK04 289 aaKnown RBP11.21□□□□□ -0.61
COLCA1-203ENST00000532918 UNC45BQ8IWX7 931 aa11.21□□□□□ -0.61
COLCA1-203ENST00000532918 NEUROG2Q9H2A3 272 aa11.21□□□□□ -0.61
COLCA1-203ENST00000532918 TLR8Q9NR97 1041 aaKnown RBP11.21□□□□□ -0.61
COLCA1-203ENST00000532918 SETD4Q9NVD3 440 aa11.21□□□□□ -0.61
COLCA1-203ENST00000532918 DBR1Q9UK59 544 aaKnown RBP11.21□□□□□ -0.61
COLCA1-203ENST00000532918 F5H423 210 aaPredicted RBP11.21□□□□□ -0.62
COLCA1-203ENST00000532918 ZNF263O14978 683 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 MAPK13O15264 365 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 SSTR3P32745 418 aaPredicted RBP11.21□□□□□ -0.62
COLCA1-203ENST00000532918 IFT88Q13099 833 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 MAPRE2Q15555 327 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 UGT3A1Q6NUS8 523 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 ZBED8Q8IZ13 594 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 USP33Q8TEY7 942 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 UBXN6Q9BZV1 441 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 CYP4F11Q9HBI6 524 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 PDE11AQ9HCR9 933 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 CRLS1Q9UJA2 301 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 NWD1Q149M9 1564 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 HNRNPCL2B2RXH8 293 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 CFLARO15519 480 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 HNRNPCL1O60812 293 aaKnown RBP11.21□□□□□ -0.62
COLCA1-203ENST00000532918 BCAT1P54687 386 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 OCA2Q04671 838 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 DDR1Q08345 913 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 CUL2Q13617 745 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 PTK6Q13882 451 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 HIST2H2ACQ16777 129 aaPredicted RBP11.21□□□□□ -0.62
COLCA1-203ENST00000532918 TTLL9Q3SXZ7 439 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 TEDDM1Q5T9Z0 273 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 HIST2H2AA3Q6FI13 130 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 TIGD7Q6NT04 549 aaPredicted RBP11.21□□□□□ -0.62
COLCA1-203ENST00000532918 RRM2BQ7LG56 351 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 CGRRF1Q99675 332 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 FBXO44Q9H4M3 255 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 PAK5Q9P286 719 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 TEKT2Q9UIF3 430 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 ITGA11Q9UKX5 1188 aa11.21□□□□□ -0.62
COLCA1-203ENST00000532918 VWDEQ8N2E2 1590 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 SSU72P8A0A1W2PR75 194 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 TTC26A0AVF1 554 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 CCDC85CA6NKD9 419 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 HNRNPCP07910 306 aaKnown RBP eCLIP11.2□□□□□ -0.62
COLCA1-203ENST00000532918 ZNF286BP0CG31 522 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 ESRRAP11474 423 aaPredicted RBP11.2□□□□□ -0.62
COLCA1-203ENST00000532918 INSRRP14616 1297 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 UCHL3P15374 230 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 ACO1P21399 889 aaKnown RBP11.2□□□□□ -0.62
COLCA1-203ENST00000532918 MDM2Q00987 491 aaPredicted RBP11.2□□□□□ -0.62
COLCA1-203ENST00000532918 TROAPQ12815 778 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 NNTQ13423 1086 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 VGLL4Q14135 290 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 GLRA4Q5JXX5 417 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 C16orf87Q6PH81 154 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 REPS2Q8NFH8 660 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 UBA3Q8TBC4 463 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 PTPRN2Q92932 1015 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 FAM163AQ96GL9 167 aaPredicted RBP11.2□□□□□ -0.62
COLCA1-203ENST00000532918 PYCARDQ9ULZ3 195 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 SPDYE5A6NIY4 337 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 DCTN3O75935 186 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 ZNF211Q13398 564 aaPredicted RBP11.2□□□□□ -0.62
COLCA1-203ENST00000532918 SPDYE7PQ495Y7 208 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 AARS2Q5JTZ9 985 aaKnown RBP11.2□□□□□ -0.62
COLCA1-203ENST00000532918 GJC2Q5T442 439 aaPredicted RBP11.2□□□□□ -0.62
COLCA1-203ENST00000532918 KRT80Q6KB66 452 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 PPP4R4Q6NUP7 873 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 PKN3Q6P5Z2 889 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 RIOX2Q8IUF8 465 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 DDI1Q8WTU0 396 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 SPATA17Q96L03 361 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 OSMRQ99650 979 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 NDE1Q9NXR1 346 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 STX18Q9P2W9 335 aaKnown RBP11.2□□□□□ -0.62
COLCA1-203ENST00000532918 SPACA6W5XKT8 324 aa11.2□□□□□ -0.62
COLCA1-203ENST00000532918 H2AFYO75367 372 aaKnown RBP11.2□□□□□ -0.62
COLCA1-203ENST00000532918 HIF1AQ16665 826 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms