RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 GOLPH3LQ9H4A5 285 aa19.17■□□□□ 0.66
SMG1-203ENST00000532700 ABI2Q9NYB9 513 aaPredicted RBP19.17■□□□□ 0.66
SMG1-203ENST00000532700 FAM13BQ9NYF5 915 aa19.17■□□□□ 0.66
SMG1-203ENST00000532700 ITGA11Q9UKX5 1188 aa19.17■□□□□ 0.66
SMG1-203ENST00000532700 HPSEQ9Y251 543 aa19.17■□□□□ 0.66
SMG1-203ENST00000532700 GREB1Q4ZG55 1949 aa19.17■□□□□ 0.66
SMG1-203ENST00000532700 ZNF197O14709 1029 aa19.16■□□□□ 0.66
SMG1-203ENST00000532700 ATP2C2O75185 946 aa19.16■□□□□ 0.66
SMG1-203ENST00000532700 HAPLN1P10915 354 aaPredicted RBP19.16■□□□□ 0.66
SMG1-203ENST00000532700 NUBP1P53384 320 aa19.16■□□□□ 0.66
SMG1-203ENST00000532700 EPHB3P54753 998 aa19.16■□□□□ 0.66
SMG1-203ENST00000532700 AMPD3Q01432 767 aa19.16■□□□□ 0.66
SMG1-203ENST00000532700 STK4Q13043 487 aa19.16■□□□□ 0.66
SMG1-203ENST00000532700 BMT2Q1RMZ1 405 aa19.16■□□□□ 0.66
SMG1-203ENST00000532700 MGAT5BQ3V5L5 792 aa19.16■□□□□ 0.66
SMG1-203ENST00000532700 ATL3Q6DD88 541 aa19.16■□□□□ 0.66
SMG1-203ENST00000532700 FRMD5Q7Z6J6 570 aa19.16■□□□□ 0.66
SMG1-203ENST00000532700 TMEM150AQ86TG1 271 aa19.16■□□□□ 0.66
SMG1-203ENST00000532700 LRRC52Q8N7C0 313 aa19.16■□□□□ 0.66
SMG1-203ENST00000532700 KBTBD7Q8WVZ9 684 aa19.16■□□□□ 0.66
SMG1-203ENST00000532700 ZNF516Q92618 1163 aa19.16■□□□□ 0.66
SMG1-203ENST00000532700 SMARCD2Q92925 531 aa19.16■□□□□ 0.66
SMG1-203ENST00000532700 LRRC27Q9C0I9 530 aa19.16■□□□□ 0.66
SMG1-203ENST00000532700 MAGEF1Q9HAY2 307 aa19.16■□□□□ 0.66
SMG1-203ENST00000532700 DSEQ9UL01 958 aa19.16■□□□□ 0.66
SMG1-203ENST00000532700 SNX9Q9Y5X1 595 aa19.16■□□□□ 0.66
SMG1-203ENST00000532700 PIEZO1Q92508 2521 aa19.15■□□□□ 0.66
SMG1-203ENST00000532700 VPS13AQ96RL7 3174 aa19.15■□□□□ 0.66
SMG1-203ENST00000532700 ZNF233A6NK53 670 aa19.15■□□□□ 0.66
SMG1-203ENST00000532700 PRAMEF12O95522 483 aa19.15■□□□□ 0.66
SMG1-203ENST00000532700 TMEM191BP0C7N4 346 aa19.15■□□□□ 0.66
SMG1-203ENST00000532700 SLFN14P0C7P3 912 aa19.15■□□□□ 0.66
SMG1-203ENST00000532700 PAX3P23760 479 aa19.15■□□□□ 0.66
SMG1-203ENST00000532700 TARSP26639 723 aaKnown RBP19.15■□□□□ 0.66
SMG1-203ENST00000532700 ALDH1A3P47895 512 aa19.15■□□□□ 0.66
SMG1-203ENST00000532700 CASP4P49662 377 aa19.15■□□□□ 0.66
SMG1-203ENST00000532700 PLD1Q13393 1074 aa19.15■□□□□ 0.66
SMG1-203ENST00000532700 SNRNP35Q16560 246 aaKnown RBP19.15■□□□□ 0.66
SMG1-203ENST00000532700 TPRG1Q6ZUI0 275 aa19.15■□□□□ 0.66
SMG1-203ENST00000532700 ASCL5Q7RTU5 278 aa19.15■□□□□ 0.66
SMG1-203ENST00000532700 LIMS2Q7Z4I7 341 aa19.15■□□□□ 0.66
SMG1-203ENST00000532700 METTL23Q86XA0 190 aa19.15■□□□□ 0.66
SMG1-203ENST00000532700 MAML2Q8IZL2 1156 aaPredicted RBP19.15■□□□□ 0.66
SMG1-203ENST00000532700 PI4K2AQ9BTU6 479 aa19.15■□□□□ 0.66
SMG1-203ENST00000532700 SMG9Q9H0W8 520 aaKnown RBP19.15■□□□□ 0.66
SMG1-203ENST00000532700 GDPD2Q9HCC8 539 aa19.15■□□□□ 0.66
SMG1-203ENST00000532700 ZFP14Q9HCL3 533 aa19.15■□□□□ 0.66
SMG1-203ENST00000532700 GDAP2Q9NXN4 497 aa19.15■□□□□ 0.66
SMG1-203ENST00000532700 DDX43Q9NXZ2 648 aaKnown RBP19.15■□□□□ 0.66
SMG1-203ENST00000532700 CFAP45Q9UL16 551 aa19.15■□□□□ 0.66
SMG1-203ENST00000532700 SIT1Q9Y3P8 196 aa19.15■□□□□ 0.66
SMG1-203ENST00000532700 FANCMQ8IYD8 2048 aa19.14■□□□□ 0.65
SMG1-203ENST00000532700 KANSL1LA0AUZ9 987 aa19.14■□□□□ 0.65
SMG1-203ENST00000532700 ARNTLO00327 626 aa19.14■□□□□ 0.65
SMG1-203ENST00000532700 CST3P01034 146 aaPredicted RBP19.14■□□□□ 0.65
SMG1-203ENST00000532700 HMGA1P17096 107 aaKnown RBP19.14■□□□□ 0.65
SMG1-203ENST00000532700 LMO2P25791 158 aa19.14■□□□□ 0.65
SMG1-203ENST00000532700 GABRR2P28476 465 aa19.14■□□□□ 0.65
SMG1-203ENST00000532700 PNPLA4P41247 253 aa19.14■□□□□ 0.65
SMG1-203ENST00000532700 RBP5P82980 135 aa19.14■□□□□ 0.65
SMG1-203ENST00000532700 CYP24A1Q07973 514 aa19.14■□□□□ 0.65
SMG1-203ENST00000532700 FZD5Q13467 585 aa19.14■□□□□ 0.65
SMG1-203ENST00000532700 KMT5BQ4FZB7 885 aa19.14■□□□□ 0.65
SMG1-203ENST00000532700 STXBP4Q6ZWJ1 553 aa19.14■□□□□ 0.65
SMG1-203ENST00000532700 ADGRF2Q8IZF7 708 aa19.14■□□□□ 0.65
SMG1-203ENST00000532700 ZNF687Q8N1G0 1237 aa19.14■□□□□ 0.65
SMG1-203ENST00000532700 THEM5Q8N1Q8 247 aa19.14■□□□□ 0.65
SMG1-203ENST00000532700 CACTINQ8WUQ7 758 aaKnown RBP19.14■□□□□ 0.65
SMG1-203ENST00000532700 SPATA32Q96LK8 384 aa19.14■□□□□ 0.65
SMG1-203ENST00000532700 TRPV4Q9HBA0 871 aa19.14■□□□□ 0.65
SMG1-203ENST00000532700 LTB4R2Q9NPC1 389 aa19.14■□□□□ 0.65
SMG1-203ENST00000532700 GTF3C4Q9UKN8 822 aa19.14■□□□□ 0.65
SMG1-203ENST00000532700 UBE4BO95155 1302 aa19.14■□□□□ 0.65
SMG1-203ENST00000532700 ANAPC1Q9H1A4 1944 aa19.13■□□□□ 0.65
SMG1-203ENST00000532700 PVALEFA0A1B0GWK0 134 aa19.13■□□□□ 0.65
SMG1-203ENST00000532700 MYBPHLA2RUH7 354 aa19.13■□□□□ 0.65
SMG1-203ENST00000532700 HEPACAM2A8MVW5 462 aa19.13■□□□□ 0.65
SMG1-203ENST00000532700 GABRDO14764 452 aa19.13■□□□□ 0.65
SMG1-203ENST00000532700 DLATP10515 647 aaKnown RBP19.13■□□□□ 0.65
SMG1-203ENST00000532700 RFX1P22670 979 aa19.13■□□□□ 0.65
SMG1-203ENST00000532700 CYP2F1P24903 491 aa19.13■□□□□ 0.65
SMG1-203ENST00000532700 GDI1P31150 447 aa19.13■□□□□ 0.65
SMG1-203ENST00000532700 NBL1P41271 181 aa19.13■□□□□ 0.65
SMG1-203ENST00000532700 NDUFA8P51970 172 aa19.13■□□□□ 0.65
SMG1-203ENST00000532700 PSMC1P62191 440 aaKnown RBP19.13■□□□□ 0.65
SMG1-203ENST00000532700 UBXN2BQ14CS0 331 aa19.13■□□□□ 0.65
SMG1-203ENST00000532700 WDR44Q5JSH3 913 aa19.13■□□□□ 0.65
SMG1-203ENST00000532700 INTS6LQ5JSJ4 861 aaKnown RBP19.13■□□□□ 0.65
SMG1-203ENST00000532700 TRAPPC11Q7Z392 1133 aa19.13■□□□□ 0.65
SMG1-203ENST00000532700 WDR49Q8IV35 697 aa19.13■□□□□ 0.65
SMG1-203ENST00000532700 LEMD2Q8NC56 503 aa19.13■□□□□ 0.65
SMG1-203ENST00000532700 RIN3Q8TB24 985 aa19.13■□□□□ 0.65
SMG1-203ENST00000532700 CCDC127Q96BQ5 260 aa19.13■□□□□ 0.65
SMG1-203ENST00000532700 HPDLQ96IR7 371 aa19.13■□□□□ 0.65
SMG1-203ENST00000532700 CGRRF1Q99675 332 aa19.13■□□□□ 0.65
SMG1-203ENST00000532700 ATXN3LQ9H3M9 355 aa19.13■□□□□ 0.65
SMG1-203ENST00000532700 SLITRK6Q9H5Y7 841 aa19.13■□□□□ 0.65
SMG1-203ENST00000532700 HSFX1Q9UBD0 423 aa19.13■□□□□ 0.65
SMG1-203ENST00000532700 CACNA1IQ9P0X4 2223 aa19.12■□□□□ 0.65
SMG1-203ENST00000532700 KIAA0391O15091 583 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms