RNA–Protein interactions for RNA: ENST00000532652.1

AP004550.1-201, humanhuman

TSL 3 BASIC

Gene AP004550.1, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004550.1-201ENST00000532652 UBQLN1Q9UMX0 589 aaKnown RBP13.71□□□□□ -0.21
AP004550.1-201ENST00000532652 WASF3Q9UPY6 502 aa13.71□□□□□ -0.21
AP004550.1-201ENST00000532652 GCN1Q92616 2671 aaKnown RBP13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 BPTFQ12830 3046 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 IGSF10Q6WRI0 2623 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 ITPR1Q14643 2758 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 TTC26A0AVF1 554 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 SFI1A8K8P3 1242 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 PPEF2O14830 753 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 DCLK1O15075 740 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 RHOBTB1O94844 696 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 CAVIN2O95810 425 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 TOP3BO95985 862 aaKnown RBP13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 ATF6P18850 670 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 TYMPP19971 482 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 CDR1P51861 262 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 STRN3Q13033 797 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 SAFBQ15424 915 aaKnown RBP eCLIP13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 ZBTB6Q15916 424 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 SH3PXD2AQ5TCZ1 1133 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 RINT1Q6NUQ1 792 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 ARMCX5Q6P1M9 558 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 SNX29Q8TEQ0 813 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 GCNAQ96QF7 691 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 SEPT5Q99719 369 aaPredicted RBP13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 ADAM33Q9BZ11 813 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 HAPLN2Q9GZV7 340 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 C17orf75Q9HAS0 396 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 PLEKHA5Q9HAU0 1116 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 HSFX1Q9UBD0 423 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 CCL26Q9Y258 94 aa13.7□□□□□ -0.22
AP004550.1-201ENST00000532652 LNP1A1A4G5 178 aa13.69□□□□□ -0.22
AP004550.1-201ENST00000532652 BCLAF3A2AJT9 711 aaKnown RBP13.69□□□□□ -0.22
AP004550.1-201ENST00000532652 CLDN3O15551 220 aa13.69□□□□□ -0.22
AP004550.1-201ENST00000532652 CLTAP09496 248 aa13.69□□□□□ -0.22
AP004550.1-201ENST00000532652 CYP3A5P20815 502 aa13.69□□□□□ -0.22
AP004550.1-201ENST00000532652 DRD1P21728 446 aa13.69□□□□□ -0.22
AP004550.1-201ENST00000532652 TNFSF9P41273 254 aa13.69□□□□□ -0.22
AP004550.1-201ENST00000532652 MATR3P43243 847 aaKnown RBP eCLIP13.69□□□□□ -0.22
AP004550.1-201ENST00000532652 TUFMP49411 452 aaKnown RBP13.69□□□□□ -0.22
AP004550.1-201ENST00000532652 MCL1Q07820 350 aa13.69□□□□□ -0.22
AP004550.1-201ENST00000532652 VEPH1Q14D04 833 aa13.69□□□□□ -0.22
AP004550.1-201ENST00000532652 ACAP1Q15027 740 aa13.69□□□□□ -0.22
AP004550.1-201ENST00000532652 KARSQ15046 597 aaKnown RBP13.69□□□□□ -0.22
AP004550.1-201ENST00000532652 MGAT5BQ3V5L5 792 aa13.69□□□□□ -0.22
AP004550.1-201ENST00000532652 TTC38Q5R3I4 469 aa13.69□□□□□ -0.22
AP004550.1-201ENST00000532652 DAB2IPQ5VWQ8 1189 aa13.69□□□□□ -0.22
AP004550.1-201ENST00000532652 C1orf186Q6ZWK4 172 aa13.69□□□□□ -0.22
AP004550.1-201ENST00000532652 CMTM8Q8IZV2 173 aa13.69□□□□□ -0.22
AP004550.1-201ENST00000532652 C4orf32Q8N8J7 132 aa13.69□□□□□ -0.22
AP004550.1-201ENST00000532652 OR10T2Q8NGX3 314 aa13.69□□□□□ -0.22
AP004550.1-201ENST00000532652 RPLP0P6Q8NHW5 317 aa13.69□□□□□ -0.22
AP004550.1-201ENST00000532652 NTPCRQ9BSD7 190 aaKnown RBP13.69□□□□□ -0.22
AP004550.1-201ENST00000532652 DNM3Q9UQ16 869 aa13.69□□□□□ -0.22
AP004550.1-201ENST00000532652 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.69□□□□□ -0.22
AP004550.1-201ENST00000532652 LACTBL1A8MY62 500 aa13.68□□□□□ -0.22
AP004550.1-201ENST00000532652 XPOTO43592 962 aaKnown RBP13.68□□□□□ -0.22
AP004550.1-201ENST00000532652 ODC1P11926 461 aa13.68□□□□□ -0.22
AP004550.1-201ENST00000532652 ARSAP15289 507 aa13.68□□□□□ -0.22
AP004550.1-201ENST00000532652 U2AF2P26368 475 aaKnown RBP eCLIP13.68□□□□□ -0.22
AP004550.1-201ENST00000532652 GBP1P32455 592 aa13.68□□□□□ -0.22
AP004550.1-201ENST00000532652 GALK1P51570 392 aa13.68□□□□□ -0.22
AP004550.1-201ENST00000532652 LILRA4P59901 499 aa13.68□□□□□ -0.22
AP004550.1-201ENST00000532652 AMPD2Q01433 879 aa13.68□□□□□ -0.22
AP004550.1-201ENST00000532652 PPP2R3AQ06190 1150 aa13.68□□□□□ -0.22
AP004550.1-201ENST00000532652 PDIA5Q14554 519 aa13.68□□□□□ -0.22
AP004550.1-201ENST00000532652 SLC39A12Q504Y0 691 aa13.68□□□□□ -0.22
AP004550.1-201ENST00000532652 NAIF1Q69YI7 327 aaPredicted RBP13.68□□□□□ -0.22
AP004550.1-201ENST00000532652 ZPBP2Q6X784 338 aa13.68□□□□□ -0.22
AP004550.1-201ENST00000532652 IGSF22Q8N9C0 903 aa13.68□□□□□ -0.22
AP004550.1-201ENST00000532652 TMEM161BQ8NDZ6 487 aa13.68□□□□□ -0.22
AP004550.1-201ENST00000532652 RIN3Q8TB24 985 aa13.68□□□□□ -0.22
AP004550.1-201ENST00000532652 GIPC2Q8TF65 315 aa13.68□□□□□ -0.22
AP004550.1-201ENST00000532652 SPIRE2Q8WWL2 714 aa13.68□□□□□ -0.22
AP004550.1-201ENST00000532652 USP13Q92995 863 aaPredicted RBP13.68□□□□□ -0.22
AP004550.1-201ENST00000532652 SENP8Q96LD8 212 aa13.68□□□□□ -0.22
AP004550.1-201ENST00000532652 SETXQ7Z333 2677 aaKnown RBP13.67□□□□□ -0.22
AP004550.1-201ENST00000532652 PCDH15Q96QU1 1955 aa13.67□□□□□ -0.22
AP004550.1-201ENST00000532652 TMEM8BA6NDV4 472 aa13.67□□□□□ -0.22
AP004550.1-201ENST00000532652 SRRM3A6NNA2 597 aaPredicted RBP13.67□□□□□ -0.22
AP004550.1-201ENST00000532652 APBB3O95704 486 aa13.67□□□□□ -0.22
AP004550.1-201ENST00000532652 MAPTP10636 758 aaKnown RBP13.67□□□□□ -0.22
AP004550.1-201ENST00000532652 CEACAM1P13688 526 aa13.67□□□□□ -0.22
AP004550.1-201ENST00000532652 NMT1P30419 496 aaKnown RBP13.67□□□□□ -0.22
AP004550.1-201ENST00000532652 GJA4P35212 333 aa13.67□□□□□ -0.22
AP004550.1-201ENST00000532652 AVPR1AP37288 418 aa13.67□□□□□ -0.22
AP004550.1-201ENST00000532652 SMTNP53814 917 aa13.67□□□□□ -0.22
AP004550.1-201ENST00000532652 RAD51AP2Q09MP3 1159 aa13.67□□□□□ -0.22
AP004550.1-201ENST00000532652 ST3GAL1Q11201 340 aa13.67□□□□□ -0.22
AP004550.1-201ENST00000532652 BFSP1Q12934 665 aa13.67□□□□□ -0.22
AP004550.1-201ENST00000532652 DMC1Q14565 340 aa13.67□□□□□ -0.22
AP004550.1-201ENST00000532652 NBR1Q14596 966 aa13.67□□□□□ -0.22
AP004550.1-201ENST00000532652 TAF12Q16514 161 aa13.67□□□□□ -0.22
AP004550.1-201ENST00000532652 FBXO43Q4G163 708 aa13.67□□□□□ -0.22
AP004550.1-201ENST00000532652 SYT13Q7L8C5 426 aa13.67□□□□□ -0.22
AP004550.1-201ENST00000532652 KCNK18Q7Z418 384 aa13.67□□□□□ -0.22
AP004550.1-201ENST00000532652 TMEM150AQ86TG1 271 aa13.67□□□□□ -0.22
AP004550.1-201ENST00000532652 MAB21L3Q8N8X9 362 aa13.67□□□□□ -0.22
AP004550.1-201ENST00000532652 GATA6Q92908 595 aa13.67□□□□□ -0.22
AP004550.1-201ENST00000532652 P2RY13Q9BPV8 354 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms