RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 COL19A1Q14993 1142 aa23.81■■□□□ 1.4
LRRK1-208ENST00000532029 EXOC3L4Q17RC7 722 aa23.81■■□□□ 1.4
LRRK1-208ENST00000532029 CTC1Q2NKJ3 1217 aa23.81■■□□□ 1.4
LRRK1-208ENST00000532029 FKBP15Q5T1M5 1219 aa23.81■■□□□ 1.4
LRRK1-208ENST00000532029 LILRA6Q6PI73 481 aa23.81■■□□□ 1.4
LRRK1-208ENST00000532029 SPATA31D4Q6ZUB0 917 aa23.81■■□□□ 1.4
LRRK1-208ENST00000532029 KREMEN2Q8NCW0 462 aa23.81■■□□□ 1.4
LRRK1-208ENST00000532029 VN1R2Q8NFZ6 395 aa23.81■■□□□ 1.4
LRRK1-208ENST00000532029 LMO3Q8TAP4 145 aa23.81■■□□□ 1.4
LRRK1-208ENST00000532029 SYT15Q9BQS2 421 aa23.81■■□□□ 1.4
LRRK1-208ENST00000532029 MAN1C1Q9NR34 630 aa23.81■■□□□ 1.4
LRRK1-208ENST00000532029 DZANK1Q9NVP4 752 aa23.81■■□□□ 1.4
LRRK1-208ENST00000532029 AFF4Q9UHB7 1163 aaKnown RBP23.81■■□□□ 1.4
LRRK1-208ENST00000532029 CDH9Q9ULB4 789 aa23.81■■□□□ 1.4
LRRK1-208ENST00000532029 GLP2RO95838 553 aa23.8■■□□□ 1.4
LRRK1-208ENST00000532029 ATP1A3P13637 1013 aa23.8■■□□□ 1.4
LRRK1-208ENST00000532029 ELF1P32519 619 aa23.8■■□□□ 1.4
LRRK1-208ENST00000532029 YWHAEP62258 255 aaKnown RBP23.8■■□□□ 1.4
LRRK1-208ENST00000532029 CUL2Q13617 745 aa23.8■■□□□ 1.4
LRRK1-208ENST00000532029 SLC39A12Q504Y0 691 aa23.8■■□□□ 1.4
LRRK1-208ENST00000532029 INTS6LQ5JSJ4 861 aaKnown RBP23.8■■□□□ 1.4
LRRK1-208ENST00000532029 LIN9Q5TKA1 542 aa23.8■■□□□ 1.4
LRRK1-208ENST00000532029 TMEM184AQ6ZMB5 413 aa23.8■■□□□ 1.4
LRRK1-208ENST00000532029 PPM1KQ8N3J5 372 aa23.8■■□□□ 1.4
LRRK1-208ENST00000532029 TTC39CQ8N584 583 aa23.8■■□□□ 1.4
LRRK1-208ENST00000532029 HDAC7Q8WUI4 952 aa23.8■■□□□ 1.4
LRRK1-208ENST00000532029 HLA-CQ95604 372 aa23.8■■□□□ 1.4
LRRK1-208ENST00000532029 DNAI2Q9GZS0 605 aa23.8■■□□□ 1.4
LRRK1-208ENST00000532029 PLEKHA4Q9H4M7 779 aa23.8■■□□□ 1.4
LRRK1-208ENST00000532029 UBE2ZQ9H832 354 aaPredicted RBP23.8■■□□□ 1.4
LRRK1-208ENST00000532029 FBXW11Q9UKB1 542 aa23.8■■□□□ 1.4
LRRK1-208ENST00000532029 BARX2Q9UMQ3 279 aaPredicted RBP23.8■■□□□ 1.4
LRRK1-208ENST00000532029 HCRTO43612 131 aa23.79■■□□□ 1.4
LRRK1-208ENST00000532029 ABLIM3O94929 683 aa23.79■■□□□ 1.4
LRRK1-208ENST00000532029 CD58P19256 250 aa23.79■■□□□ 1.4
LRRK1-208ENST00000532029 TRIM21P19474 475 aaKnown RBP23.79■■□□□ 1.4
LRRK1-208ENST00000532029 LMO2P25791 158 aa23.79■■□□□ 1.4
LRRK1-208ENST00000532029 SMARCB1Q12824 385 aa23.79■■□□□ 1.4
LRRK1-208ENST00000532029 RNF19BQ6ZMZ0 732 aa23.79■■□□□ 1.4
LRRK1-208ENST00000532029 UNC93AQ86WB7 457 aa23.79■■□□□ 1.4
LRRK1-208ENST00000532029 MAFFQ9ULX9 164 aa23.79■■□□□ 1.4
LRRK1-208ENST00000532029 COG5Q9UP83 839 aa23.79■■□□□ 1.4
LRRK1-208ENST00000532029 LRRC10BA6NIK2 292 aa23.78■■□□□ 1.4
LRRK1-208ENST00000532029 ATF2P15336 505 aa23.78■■□□□ 1.4
LRRK1-208ENST00000532029 SLC9A1P19634 815 aa23.78■■□□□ 1.4
LRRK1-208ENST00000532029 NDST1P52848 882 aa23.78■■□□□ 1.4
LRRK1-208ENST00000532029 PSMC1P62191 440 aaKnown RBP23.78■■□□□ 1.4
LRRK1-208ENST00000532029 ADCY1Q08828 1119 aa23.78■■□□□ 1.4
LRRK1-208ENST00000532029 NFE2Q16621 373 aaPredicted RBP23.78■■□□□ 1.4
LRRK1-208ENST00000532029 ANKRD54Q6NXT1 300 aa23.78■■□□□ 1.4
LRRK1-208ENST00000532029 TRIM65Q6PJ69 517 aa23.78■■□□□ 1.4
LRRK1-208ENST00000532029 CCDC149Q6ZUS6 474 aa23.78■■□□□ 1.4
LRRK1-208ENST00000532029 TNIP3Q96KP6 325 aa23.78■■□□□ 1.4
LRRK1-208ENST00000532029 PGLYRP2Q96PD5 576 aa23.78■■□□□ 1.4
LRRK1-208ENST00000532029 FAM124BQ9H5Z6 455 aaPredicted RBP23.78■■□□□ 1.4
LRRK1-208ENST00000532029 PLXNA3P51805 1871 aa23.77■■□□□ 1.4
LRRK1-208ENST00000532029 MTMR11A4FU01 709 aa23.77■■□□□ 1.4
LRRK1-208ENST00000532029 LGALS16A8MUM7 142 aa23.77■■□□□ 1.4
LRRK1-208ENST00000532029 PRRG1O14668 218 aa23.77■■□□□ 1.4
LRRK1-208ENST00000532029 TBX10O75333 385 aa23.77■■□□□ 1.4
LRRK1-208ENST00000532029 PON1P27169 355 aa23.77■■□□□ 1.4
LRRK1-208ENST00000532029 INCA1Q0VD86 236 aa23.77■■□□□ 1.4
LRRK1-208ENST00000532029 MAPRE1Q15691 268 aaKnown RBP23.77■■□□□ 1.4
LRRK1-208ENST00000532029 FILIP1LQ4L180 1135 aa23.77■■□□□ 1.4
LRRK1-208ENST00000532029 LRRTM3Q86VH5 581 aa23.77■■□□□ 1.4
LRRK1-208ENST00000532029 ARHGEF19Q8IW93 802 aa23.77■■□□□ 1.4
LRRK1-208ENST00000532029 C2orf15Q8WU43 125 aaKnown RBP23.77■■□□□ 1.4
LRRK1-208ENST00000532029 ARID3AQ99856 593 aa23.77■■□□□ 1.4
LRRK1-208ENST00000532029 ANP32EQ9BTT0 268 aa23.77■■□□□ 1.4
LRRK1-208ENST00000532029 CYP4F11Q9HBI6 524 aa23.77■■□□□ 1.4
LRRK1-208ENST00000532029 CISHQ9NSE2 258 aa23.77■■□□□ 1.4
LRRK1-208ENST00000532029 GTF3C4Q9UKN8 822 aa23.77■■□□□ 1.4
LRRK1-208ENST00000532029 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.76■■□□□ 1.39
LRRK1-208ENST00000532029 ATP2C2O75185 946 aa23.76■■□□□ 1.39
LRRK1-208ENST00000532029 CILPO75339 1184 aa23.76■■□□□ 1.39
LRRK1-208ENST00000532029 SERPINC1P01008 464 aa23.76■■□□□ 1.39
LRRK1-208ENST00000532029 C8AP07357 584 aa23.76■■□□□ 1.39
LRRK1-208ENST00000532029 HOXB8P17481 243 aaPredicted RBP23.76■■□□□ 1.39
LRRK1-208ENST00000532029 KCNA5P22460 613 aa23.76■■□□□ 1.39
LRRK1-208ENST00000532029 LTBRP36941 435 aa23.76■■□□□ 1.39
LRRK1-208ENST00000532029 GCNT1Q02742 428 aa23.76■■□□□ 1.39
LRRK1-208ENST00000532029 RRAGAQ7L523 313 aa23.76■■□□□ 1.39
LRRK1-208ENST00000532029 SLC7A14Q8TBB6 771 aa23.76■■□□□ 1.39
LRRK1-208ENST00000532029 FAM81BQ96LP2 452 aa23.76■■□□□ 1.39
LRRK1-208ENST00000532029 NT5C1AQ9BXI3 368 aa23.76■■□□□ 1.39
LRRK1-208ENST00000532029 DPEP3Q9H4B8 488 aa23.76■■□□□ 1.39
LRRK1-208ENST00000532029 SFXN1Q9H9B4 322 aa23.76■■□□□ 1.39
LRRK1-208ENST00000532029 UBE2TQ9NPD8 197 aaPredicted RBP23.76■■□□□ 1.39
LRRK1-208ENST00000532029 CLEC1BQ9P126 229 aa23.76■■□□□ 1.39
LRRK1-208ENST00000532029 NME7Q9Y5B8 376 aa23.76■■□□□ 1.39
LRRK1-208ENST00000532029 PCDHB5Q9Y5E4 795 aa23.76■■□□□ 1.39
LRRK1-208ENST00000532029 COL6A3P12111 3177 aa23.75■■□□□ 1.39
LRRK1-208ENST00000532029 MYBPHLA2RUH7 354 aa23.75■■□□□ 1.39
LRRK1-208ENST00000532029 ZMYND10O75800 440 aa23.75■■□□□ 1.39
LRRK1-208ENST00000532029 PTPN1P18031 435 aaKnown RBP23.75■■□□□ 1.39
LRRK1-208ENST00000532029 UBXN1Q04323 297 aa23.75■■□□□ 1.39
LRRK1-208ENST00000532029 DLX2Q07687 328 aaPredicted RBP23.75■■□□□ 1.39
LRRK1-208ENST00000532029 UVSSAQ2YD98 709 aa23.75■■□□□ 1.39
LRRK1-208ENST00000532029 PPM1LQ5SGD2 360 aa23.75■■□□□ 1.39
LRRK1-208ENST00000532029 PHLDB3Q6NSJ2 640 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms