RNA–Protein interactions for RNA: ENST00000531995.1

PUF60-218, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-218ENST00000531995 NXPE3Q969Y0 559 aa20.03■□□□□ 0.8
PUF60-218ENST00000531995 FOXQ1Q9C009 403 aa20.03■□□□□ 0.8
PUF60-218ENST00000531995 CDH7Q9ULB5 785 aa20.03■□□□□ 0.8
PUF60-218ENST00000531995 ZNF292O60281 2723 aa20.03■□□□□ 0.8
PUF60-218ENST00000531995 SCN1AP35498 2009 aa20.02■□□□□ 0.8
PUF60-218ENST00000531995 BICDL2A1A5D9 508 aa20.02■□□□□ 0.8
PUF60-218ENST00000531995 TULP1O00294 542 aaPredicted RBP20.02■□□□□ 0.8
PUF60-218ENST00000531995 XYLBO75191 536 aa20.02■□□□□ 0.8
PUF60-218ENST00000531995 CST3P01034 146 aaPredicted RBP20.02■□□□□ 0.8
PUF60-218ENST00000531995 C4BPAP04003 597 aaKnown RBP20.02■□□□□ 0.8
PUF60-218ENST00000531995 ERCC5P28715 1186 aaPredicted RBP20.02■□□□□ 0.8
PUF60-218ENST00000531995 AARSP49588 968 aaKnown RBP eCLIP20.02■□□□□ 0.8
PUF60-218ENST00000531995 VAMP7P51809 220 aa20.02■□□□□ 0.8
PUF60-218ENST00000531995 ENPEPQ07075 957 aa20.02■□□□□ 0.8
PUF60-218ENST00000531995 PDXDC1Q6P996 788 aa20.02■□□□□ 0.8
PUF60-218ENST00000531995 TRAPPC11Q7Z392 1133 aa20.02■□□□□ 0.8
PUF60-218ENST00000531995 IRF2BP1Q8IU81 584 aa20.02■□□□□ 0.8
PUF60-218ENST00000531995 CACTINQ8WUQ7 758 aaKnown RBP20.02■□□□□ 0.8
PUF60-218ENST00000531995 CEP63Q96MT8 703 aa20.02■□□□□ 0.8
PUF60-218ENST00000531995 KXD1Q9BQD3 176 aa20.02■□□□□ 0.8
PUF60-218ENST00000531995 FUCA2Q9BTY2 467 aa20.02■□□□□ 0.8
PUF60-218ENST00000531995 MTRRQ9UBK8 725 aa20.02■□□□□ 0.8
PUF60-218ENST00000531995 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.02■□□□□ 0.8
PUF60-218ENST00000531995 SLC16A3O15427 465 aaKnown RBP20.01■□□□□ 0.79
PUF60-218ENST00000531995 ITGB3P05106 788 aa20.01■□□□□ 0.79
PUF60-218ENST00000531995 TNNI1P19237 187 aa20.01■□□□□ 0.79
PUF60-218ENST00000531995 HOXA9P31269 272 aa20.01■□□□□ 0.79
PUF60-218ENST00000531995 LILRA4P59901 499 aa20.01■□□□□ 0.79
PUF60-218ENST00000531995 PPP3CAQ08209 521 aa20.01■□□□□ 0.79
PUF60-218ENST00000531995 BFSP1Q12934 665 aa20.01■□□□□ 0.79
PUF60-218ENST00000531995 SKOR2Q2VWA4 1001 aaPredicted RBP20.01■□□□□ 0.79
PUF60-218ENST00000531995 SASS6Q6UVJ0 657 aa20.01■□□□□ 0.79
PUF60-218ENST00000531995 C11orf57Q6ZUT1 292 aaPredicted RBP20.01■□□□□ 0.79
PUF60-218ENST00000531995 INTS8Q75QN2 995 aaKnown RBP20.01■□□□□ 0.79
PUF60-218ENST00000531995 CSGALNACT2Q8N6G5 542 aa20.01■□□□□ 0.79
PUF60-218ENST00000531995 FNBP1Q96RU3 617 aa20.01■□□□□ 0.79
PUF60-218ENST00000531995 SRRTQ9BXP5 876 aaKnown RBP20.01■□□□□ 0.79
PUF60-218ENST00000531995 SLC2A4RGQ9NR83 387 aa20.01■□□□□ 0.79
PUF60-218ENST00000531995 AGAP1Q9UPQ3 857 aa20.01■□□□□ 0.79
PUF60-218ENST00000531995 FANCMQ8IYD8 2048 aa20.01■□□□□ 0.79
PUF60-218ENST00000531995 LRRN2O75325 713 aa20■□□□□ 0.79
PUF60-218ENST00000531995 VNN1O95497 513 aa20■□□□□ 0.79
PUF60-218ENST00000531995 TRIM49P0CI25 452 aa20■□□□□ 0.79
PUF60-218ENST00000531995 TRIM49CP0CI26 452 aa20■□□□□ 0.79
PUF60-218ENST00000531995 POLR2BP30876 1174 aaKnown RBP20■□□□□ 0.79
PUF60-218ENST00000531995 GPC5P78333 572 aa20■□□□□ 0.79
PUF60-218ENST00000531995 TYRO3Q06418 890 aa20■□□□□ 0.79
PUF60-218ENST00000531995 RAB33AQ14088 237 aa20■□□□□ 0.79
PUF60-218ENST00000531995 PABPC1LQ4VXU2 614 aaKnown RBP20■□□□□ 0.79
PUF60-218ENST00000531995 CT47A1Q5JQC4 288 aaPredicted RBP20■□□□□ 0.79
PUF60-218ENST00000531995 TDRD10Q5VZ19 366 aaKnown RBP20■□□□□ 0.79
PUF60-218ENST00000531995 NPAS3Q8IXF0 933 aa20■□□□□ 0.79
PUF60-218ENST00000531995 ANKRD36BP1Q96IX9 119 aa20■□□□□ 0.79
PUF60-218ENST00000531995 SUSD3Q96L08 255 aa20■□□□□ 0.79
PUF60-218ENST00000531995 ITGA11Q9UKX5 1188 aa20■□□□□ 0.79
PUF60-218ENST00000531995 ZFP37Q9Y6Q3 630 aaPredicted RBP20■□□□□ 0.79
PUF60-218ENST00000531995 R4GN57 208 aa20■□□□□ 0.79
PUF60-218ENST00000531995 M0QZQ0 153 aa19.99■□□□□ 0.79
PUF60-218ENST00000531995 IKBKBO14920 756 aa19.99■□□□□ 0.79
PUF60-218ENST00000531995 TNNC2P02585 160 aa19.99■□□□□ 0.79
PUF60-218ENST00000531995 TMEM191BP0C7N4 346 aa19.99■□□□□ 0.79
PUF60-218ENST00000531995 EPB41P11171 864 aaKnown RBP19.99■□□□□ 0.79
PUF60-218ENST00000531995 ROR1Q01973 937 aa19.99■□□□□ 0.79
PUF60-218ENST00000531995 MTSS1LQ765P7 747 aa19.99■□□□□ 0.79
PUF60-218ENST00000531995 PJA1Q8NG27 643 aa19.99■□□□□ 0.79
PUF60-218ENST00000531995 SYAP1Q96A49 352 aaPredicted RBP19.99■□□□□ 0.79
PUF60-218ENST00000531995 ANO10Q9NW15 660 aa19.99■□□□□ 0.79
PUF60-218ENST00000531995 DNMT3BQ9UBC3 853 aaKnown RBP19.99■□□□□ 0.79
PUF60-218ENST00000531995 SIT1Q9Y3P8 196 aa19.99■□□□□ 0.79
PUF60-218ENST00000531995 DNAH14Q0VDD8 3507 aa19.98■□□□□ 0.79
PUF60-218ENST00000531995 GLULP15104 373 aa19.98■□□□□ 0.79
PUF60-218ENST00000531995 MARSP56192 900 aaKnown RBP19.98■□□□□ 0.79
PUF60-218ENST00000531995 ARPP19P56211 112 aa19.98■□□□□ 0.79
PUF60-218ENST00000531995 RBP5P82980 135 aa19.98■□□□□ 0.79
PUF60-218ENST00000531995 MRPL58Q14197 206 aaKnown RBP19.98■□□□□ 0.79
PUF60-218ENST00000531995 STX1AQ16623 288 aa19.98■□□□□ 0.79
PUF60-218ENST00000531995 SLC5A9Q2M3M2 681 aa19.98■□□□□ 0.79
PUF60-218ENST00000531995 ZACNQ401N2 412 aa19.98■□□□□ 0.79
PUF60-218ENST00000531995 PHLDB3Q6NSJ2 640 aa19.98■□□□□ 0.79
PUF60-218ENST00000531995 ANKS3Q6ZW76 656 aa19.98■□□□□ 0.79
PUF60-218ENST00000531995 SV2AQ7L0J3 742 aa19.98■□□□□ 0.79
PUF60-218ENST00000531995 DLGAP2Q9P1A6 1054 aa19.98■□□□□ 0.79
PUF60-218ENST00000531995 DACH1Q9UI36 760 aa19.98■□□□□ 0.79
PUF60-218ENST00000531995 CACNA1IQ9P0X4 2223 aa19.97■□□□□ 0.79
PUF60-218ENST00000531995 KRT13P13646 458 aa19.97■□□□□ 0.79
PUF60-218ENST00000531995 AP3M2P53677 418 aa19.97■□□□□ 0.79
PUF60-218ENST00000531995 VARS2Q5ST30 1063 aaKnown RBP19.97■□□□□ 0.79
PUF60-218ENST00000531995 LRRC52Q8N7C0 313 aa19.97■□□□□ 0.79
PUF60-218ENST00000531995 ENOX1Q8TC92 643 aaKnown RBP19.97■□□□□ 0.79
PUF60-218ENST00000531995 SLC35C1Q96A29 364 aa19.97■□□□□ 0.79
PUF60-218ENST00000531995 SENP8Q96LD8 212 aa19.97■□□□□ 0.79
PUF60-218ENST00000531995 XYLT2Q9H1B5 865 aa19.97■□□□□ 0.79
PUF60-218ENST00000531995 DNAJC25Q9H1X3 360 aa19.97■□□□□ 0.79
PUF60-218ENST00000531995 ARMCX3Q9UH62 379 aaPredicted RBP19.97■□□□□ 0.79
PUF60-218ENST00000531995 PCDHB8Q9UN66 801 aa19.97■□□□□ 0.79
PUF60-218ENST00000531995 MRPS23Q9Y3D9 190 aaKnown RBP19.97■□□□□ 0.79
PUF60-218ENST00000531995 NUB1Q9Y5A7 615 aa19.97■□□□□ 0.79
PUF60-218ENST00000531995 BACE2Q9Y5Z0 518 aa19.97■□□□□ 0.79
PUF60-218ENST00000531995 EP300Q09472 2414 aaPredicted RBP19.96■□□□□ 0.79
PUF60-218ENST00000531995 SYCE3A1L190 88 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms