RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 AXIN1O15169 862 aa18.74■□□□□ 0.59
PKP3-208ENST00000531857 CYP11A1P05108 521 aa18.74■□□□□ 0.59
PKP3-208ENST00000531857 KCNA4P22459 653 aa18.74■□□□□ 0.59
PKP3-208ENST00000531857 TUFMP49411 452 aaKnown RBP18.74■□□□□ 0.59
PKP3-208ENST00000531857 MCM2P49736 904 aa18.74■□□□□ 0.59
PKP3-208ENST00000531857 PLCB2Q00722 1185 aa18.74■□□□□ 0.59
PKP3-208ENST00000531857 DHX8Q14562 1220 aaKnown RBP18.74■□□□□ 0.59
PKP3-208ENST00000531857 SF3A2Q15428 464 aaKnown RBP18.74■□□□□ 0.59
PKP3-208ENST00000531857 ST3GAL2Q16842 350 aa18.74■□□□□ 0.59
PKP3-208ENST00000531857 ITPRIPL2Q3MIP1 535 aa18.74■□□□□ 0.59
PKP3-208ENST00000531857 RILPL1Q5EBL4 403 aa18.74■□□□□ 0.59
PKP3-208ENST00000531857 LRRTM3Q86VH5 581 aa18.74■□□□□ 0.59
PKP3-208ENST00000531857 MYCT1Q8N699 235 aa18.74■□□□□ 0.59
PKP3-208ENST00000531857 CHFRQ96EP1 664 aa18.74■□□□□ 0.59
PKP3-208ENST00000531857 ARRDC1-AS1Q9H2J1 176 aa18.74■□□□□ 0.59
PKP3-208ENST00000531857 GKN1Q9NS71 199 aa18.74■□□□□ 0.59
PKP3-208ENST00000531857 RXFP3Q9NSD7 469 aa18.74■□□□□ 0.59
PKP3-208ENST00000531857 ODF2LQ9ULJ1 636 aa18.74■□□□□ 0.59
PKP3-208ENST00000531857 ANAPC1Q9H1A4 1944 aa18.73■□□□□ 0.59
PKP3-208ENST00000531857 OTOL1A6NHN0 477 aaPredicted RBP18.73■□□□□ 0.59
PKP3-208ENST00000531857 ANKRD63C9JTQ0 380 aa18.73■□□□□ 0.59
PKP3-208ENST00000531857 CDC25CP30307 473 aa18.73■□□□□ 0.59
PKP3-208ENST00000531857 ACOT2P49753 483 aa18.73■□□□□ 0.59
PKP3-208ENST00000531857 TMEM132DQ14C87 1099 aa18.73■□□□□ 0.59
PKP3-208ENST00000531857 VEPH1Q14D04 833 aa18.73■□□□□ 0.59
PKP3-208ENST00000531857 FSTL4Q6MZW2 842 aa18.73■□□□□ 0.59
PKP3-208ENST00000531857 TMEM150AQ86TG1 271 aa18.73■□□□□ 0.59
PKP3-208ENST00000531857 GPBP1Q86WP2 473 aa18.73■□□□□ 0.59
PKP3-208ENST00000531857 CD302Q8IX05 232 aa18.73■□□□□ 0.59
PKP3-208ENST00000531857 FAM83CQ9BQN1 747 aa18.73■□□□□ 0.59
PKP3-208ENST00000531857 HPS4Q9NQG7 708 aa18.73■□□□□ 0.59
PKP3-208ENST00000531857 POLR3BQ9NW08 1133 aaPredicted RBP18.73■□□□□ 0.59
PKP3-208ENST00000531857 CCL26Q9Y258 94 aa18.73■□□□□ 0.59
PKP3-208ENST00000531857 TISP43B9A030 160 aa18.72■□□□□ 0.59
PKP3-208ENST00000531857 CYB561D2O14569 222 aa18.72■□□□□ 0.59
PKP3-208ENST00000531857 NMT1P30419 496 aaKnown RBP18.72■□□□□ 0.59
PKP3-208ENST00000531857 ZNF131P52739 623 aa18.72■□□□□ 0.59
PKP3-208ENST00000531857 TRIM68Q6AZZ1 485 aa18.72■□□□□ 0.59
PKP3-208ENST00000531857 KBTBD6Q86V97 674 aa18.72■□□□□ 0.59
PKP3-208ENST00000531857 CMTM8Q8IZV2 173 aa18.72■□□□□ 0.59
PKP3-208ENST00000531857 RIN3Q8TB24 985 aa18.72■□□□□ 0.59
PKP3-208ENST00000531857 GAB3Q8WWW8 586 aa18.72■□□□□ 0.59
PKP3-208ENST00000531857 FIZ1Q96SL8 496 aa18.72■□□□□ 0.59
PKP3-208ENST00000531857 PYM1Q9BRP8 204 aaKnown RBP18.72■□□□□ 0.59
PKP3-208ENST00000531857 EBF3Q9H4W6 596 aa18.72■□□□□ 0.59
PKP3-208ENST00000531857 BLOC1S4Q9NUP1 217 aa18.72■□□□□ 0.59
PKP3-208ENST00000531857 THG1LQ9NWX6 298 aaKnown RBP18.72■□□□□ 0.59
PKP3-208ENST00000531857 TRAK2O60296 914 aa18.71■□□□□ 0.59
PKP3-208ENST00000531857 FOXD2O60548 495 aaPredicted RBP18.71■□□□□ 0.59
PKP3-208ENST00000531857 RPP40O75818 363 aaKnown RBP18.71■□□□□ 0.59
PKP3-208ENST00000531857 FAM13AO94988 1023 aa18.71■□□□□ 0.59
PKP3-208ENST00000531857 HAPLN1P10915 354 aaPredicted RBP18.71■□□□□ 0.59
PKP3-208ENST00000531857 PAX3P23760 479 aa18.71■□□□□ 0.59
PKP3-208ENST00000531857 AASDHQ4L235 1098 aaPredicted RBP18.71■□□□□ 0.59
PKP3-208ENST00000531857 TMEM196Q5HYL7 178 aa18.71■□□□□ 0.59
PKP3-208ENST00000531857 WSCD1Q658N2 575 aa18.71■□□□□ 0.59
PKP3-208ENST00000531857 ARL6IP4Q66PJ3 421 aaKnown RBP18.71■□□□□ 0.59
PKP3-208ENST00000531857 METTL23Q86XA0 190 aa18.71■□□□□ 0.59
PKP3-208ENST00000531857 MAB21L3Q8N8X9 362 aa18.71■□□□□ 0.59
PKP3-208ENST00000531857 STKLD1Q8NE28 680 aa18.71■□□□□ 0.59
PKP3-208ENST00000531857 USP13Q92995 863 aaPredicted RBP18.71■□□□□ 0.59
PKP3-208ENST00000531857 CHAMP1Q96JM3 812 aa18.71■□□□□ 0.59
PKP3-208ENST00000531857 GCNAQ96QF7 691 aa18.71■□□□□ 0.59
PKP3-208ENST00000531857 IKZF4Q9H2S9 585 aa18.71■□□□□ 0.59
PKP3-208ENST00000531857 PARVGQ9HBI0 331 aa18.71■□□□□ 0.59
PKP3-208ENST00000531857 ABI2Q9NYB9 513 aaPredicted RBP18.71■□□□□ 0.59
PKP3-208ENST00000531857 DSEQ9UL01 958 aa18.71■□□□□ 0.59
PKP3-208ENST00000531857 DERAQ9Y315 318 aa18.71■□□□□ 0.59
PKP3-208ENST00000531857 TM4SF5O14894 197 aa18.7■□□□□ 0.58
PKP3-208ENST00000531857 F11P03951 625 aa18.7■□□□□ 0.58
PKP3-208ENST00000531857 HMGA1P17096 107 aaKnown RBP18.7■□□□□ 0.58
PKP3-208ENST00000531857 LAMA1P25391 3075 aa18.7■□□□□ 0.58
PKP3-208ENST00000531857 RAP1GAPP47736 663 aa18.7■□□□□ 0.58
PKP3-208ENST00000531857 NLRP12P59046 1061 aa18.7■□□□□ 0.58
PKP3-208ENST00000531857 GTF2BQ00403 316 aa18.7■□□□□ 0.58
PKP3-208ENST00000531857 RUNX3Q13761 415 aa18.7■□□□□ 0.58
PKP3-208ENST00000531857 MCM6Q14566 821 aa18.7■□□□□ 0.58
PKP3-208ENST00000531857 TAF12Q16514 161 aa18.7■□□□□ 0.58
PKP3-208ENST00000531857 ZC2HC1CQ53FD0 456 aaPredicted RBP18.7■□□□□ 0.58
PKP3-208ENST00000531857 IL31Q6EBC2 164 aa18.7■□□□□ 0.58
PKP3-208ENST00000531857 CACNA2D4Q7Z3S7 1137 aa18.7■□□□□ 0.58
PKP3-208ENST00000531857 THEM5Q8N1Q8 247 aa18.7■□□□□ 0.58
PKP3-208ENST00000531857 SPPL2BQ8TCT7 592 aa18.7■□□□□ 0.58
PKP3-208ENST00000531857 NUP205Q92621 2012 aa18.7■□□□□ 0.58
PKP3-208ENST00000531857 ZHX3Q9H4I2 956 aa18.7■□□□□ 0.58
PKP3-208ENST00000531857 FBRSL1Q9HCM7 1045 aaKnown RBP18.7■□□□□ 0.58
PKP3-208ENST00000531857 TMLHEQ9NVH6 421 aa18.7■□□□□ 0.58
PKP3-208ENST00000531857 DPP3Q9NY33 737 aa18.7■□□□□ 0.58
PKP3-208ENST00000531857 HELZP42694 1942 aaKnown RBP18.7■□□□□ 0.58
PKP3-208ENST00000531857 TRDMT1O14717 391 aaKnown RBP18.69■□□□□ 0.58
PKP3-208ENST00000531857 EPN2O95208 641 aa18.69■□□□□ 0.58
PKP3-208ENST00000531857 EGFP01133 1207 aa18.69■□□□□ 0.58
PKP3-208ENST00000531857 ZNF806P0C7X5 589 aa18.69■□□□□ 0.58
PKP3-208ENST00000531857 ARSAP15289 507 aa18.69■□□□□ 0.58
PKP3-208ENST00000531857 SCP2P22307 547 aa18.69■□□□□ 0.58
PKP3-208ENST00000531857 GPR15P49685 360 aa18.69■□□□□ 0.58
PKP3-208ENST00000531857 TAF6P49848 677 aa18.69■□□□□ 0.58
PKP3-208ENST00000531857 LIMK1P53667 647 aa18.69■□□□□ 0.58
PKP3-208ENST00000531857 GRSF1Q12849 480 aaKnown RBP eCLIP18.69■□□□□ 0.58
PKP3-208ENST00000531857 PTPAQ15257 358 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms