RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 CDKL5O76039 1030 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 CFIP05156 583 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 CRHR1P34998 444 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 RENBPP51606 427 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 CHN2P52757 468 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 NKX6-1P78426 367 aaPredicted RBP5.31□□□□□ -1.56
USP47-211ENST00000531513 TNFAIP2Q03169 654 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 NOGQ13253 232 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 FAM209BQ5JX69 171 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 MFSD14BQ5SR56 506 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 SP5Q6BEB4 398 aaPredicted RBP5.31□□□□□ -1.56
USP47-211ENST00000531513 CCDC70Q6NSX1 233 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 CCDC174Q6PII3 467 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 CLEC4GQ6UXB4 293 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 SPATA5Q8NB90 893 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 C3orf20Q8ND61 904 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 ZNF480Q8WV37 535 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 ANKS1AQ92625 1134 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 KIAA1191Q96A73 305 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 ZMAT3Q9HA38 289 aaKnown RBP5.31□□□□□ -1.56
USP47-211ENST00000531513 CERS4Q9HA82 394 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 KIAA1586Q9HCI6 787 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 RNF181Q9P0P0 153 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 TESQ9UGI8 421 aaKnown RBP5.31□□□□□ -1.56
USP47-211ENST00000531513 PADI4Q9UM07 663 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 CORO2BQ9UQ03 480 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 FRMD4BQ9Y2L6 1034 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 SNX13Q9Y5W8 968 aa5.31□□□□□ -1.56
USP47-211ENST00000531513 PHGDHO43175 533 aaKnown RBP5.3□□□□□ -1.56
USP47-211ENST00000531513 ADCY6O43306 1168 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 NCK2O43639 380 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 ABCB4P21439 1286 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 CHKAP35790 457 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 GRK6P43250 576 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 STT3AP46977 705 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 CCT5P48643 541 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 KRTAP10-9P60411 292 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 MXRA7P84157 204 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 SEPT2Q15019 361 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 ELF2Q15723 593 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 ZNF362Q5T0B9 420 aaPredicted RBP5.3□□□□□ -1.56
USP47-211ENST00000531513 AGAP9Q5VTM2 703 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.3□□□□□ -1.56
USP47-211ENST00000531513 ZFP28Q8NHY6 868 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 IL31RAQ8NI17 732 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 SLC35B2Q8TB61 432 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 BRI3BPQ8WY22 251 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 CCT6BQ92526 530 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 SLC9A6Q92581 669 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 MTFMTQ96DP5 389 aaKnown RBP5.3□□□□□ -1.56
USP47-211ENST00000531513 ZC3H10Q96K80 434 aaKnown RBP5.3□□□□□ -1.56
USP47-211ENST00000531513 CLPTM1LQ96KA5 538 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 PHACTR3Q96KR7 559 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 FAM167AQ96KS9 214 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 DMRTA2Q96SC8 542 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 SENP7Q9BQF6 1050 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 LMBRD1Q9NUN5 540 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 CDC23Q9UJX2 597 aa5.3□□□□□ -1.56
USP47-211ENST00000531513 LRRC14BA6NHZ5 514 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 ISM1B1AKI9 464 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 H3BUI4 141 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 AKR1B10O60218 316 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 TLR5O60602 858 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 PHF2O75151 1096 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 ARIH2O95376 493 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 ERBB2P04626 1255 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 FDXRP22570 491 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 FLT3LGP49771 235 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 MAPRE1Q15691 268 aaKnown RBP5.29□□□□□ -1.56
USP47-211ENST00000531513 GJC2Q5T442 439 aaPredicted RBP5.29□□□□□ -1.56
USP47-211ENST00000531513 ARMC6Q6NXE6 501 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 LDHAL6AQ6ZMR3 332 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 Q6ZVL8 140 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 PDZD4Q76G19 769 aaPredicted RBP5.29□□□□□ -1.56
USP47-211ENST00000531513 HEATR3Q7Z4Q2 680 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 RHOT1Q8IXI2 618 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 TEX19Q8NA77 164 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 OR56A1Q8NGH5 318 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 CAGE1Q8TC20 777 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 DUSP26Q9BV47 211 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 UNKQ9C0B0 810 aaKnown RBP5.29□□□□□ -1.56
USP47-211ENST00000531513 ZNF287Q9HBT7 754 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 PNPOQ9NVS9 261 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 C9orf78Q9NZ63 289 aaPredicted RBP5.29□□□□□ -1.56
USP47-211ENST00000531513 STAP2Q9UGK3 403 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 PCDHGB3Q9Y5G1 929 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 PCDHA3Q9Y5H8 950 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 ATRNL1Q5VV63 1379 aa5.29□□□□□ -1.56
USP47-211ENST00000531513 USP19O94966 1318 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 A0A087WV62 115 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 A0A1W2PPL8 197 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 POM121BA6NF01 834 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 DRGXA6NNA5 263 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 WNT10BO00744 389 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 MGST3O14880 152 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 FGF18O76093 207 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 CENPBP07199 599 aaPredicted RBP5.28□□□□□ -1.56
USP47-211ENST00000531513 ELANEP08246 267 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 TYRP14679 529 aa5.28□□□□□ -1.56
USP47-211ENST00000531513 TECP42680 631 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms